Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01000405001 Vitis vinifera HOM05D000216 ORTHO05D000634 1.9e-74 282.3 133 100.0
BolSC37t60766H Brassica oleracea HOM05D000216 ORTHO05D000634 4.7e-33 144.8 71 90.1
BolSC45t60875H Brassica oleracea HOM05D000216 ORTHO05D000634 4.7e-33 144.8 71 90.1
BolSC45t60939H Brassica oleracea HOM05D000216 ORTHO05D000634 4.7e-33 144.8 71 90.1
BraSC140t45586Z Brassica rapa HOM05D000216 ORTHO05D000634 4.7e-33 144.8 71 90.1
BraSC151t45702Z Brassica rapa HOM05D000216 ORTHO05D000634 4.7e-33 144.8 71 90.1
BraSC58t46407Z Brassica rapa HOM05D000216 ORTHO05D000634 4.7e-33 144.8 71 90.1
CAN.G2141.5 Capsicum annuum HOM05D000216 ORTHO05D000634 4.7e-33 144.8 72 90.3
CAN.G481.11 Capsicum annuum HOM05D000216 ORTHO05D000634 4.7e-33 144.8 72 90.3
MELO3C027102.2 Cucumis melo HOM05D000216 ORTHO05D000634 4.7e-33 144.8 71 90.1
Nn082s42673 Nelumbo nucifera HOM05D000216 ORTHO05D000634 4.7e-33 144.8 72 90.3
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 6.1e-33 144.4 70 91.4
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 1.0e-32 143.7 71 90.1
BNapus_Darmor_BZH_scaffold_253p00070 Brassica napus HOM05D000216 ORTHO05D000634 1.4e-32 143.3 70 90.0
Sed0024913 Sechium edule HOM05D000216 ORTHO05D000634 1.4e-32 143.3 70 90.0
Sed0025165 Sechium edule HOM05D000216 ORTHO05D000634 1.4e-32 143.3 70 90.0
ATCG00180 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 1.8e-32 142.9 70 90.0
LjContig00318g0019842 Lotus japonicus HOM05D000216 ORTHO05D000634 1.8e-32 142.9 71 88.7
PSO548G0054 Papaver somniferum HOM05D000216 ORTHO05D000634 1.8e-32 142.9 70 90.0
PGR111G0082 Punica granatum HOM05D000216 ORTHO05D000634 1.8e-32 142.9 70 90.0
Atru.chr13.1918 Acer truncatum HOM05D000216 ORTHO05D000634 5.2e-32 141.4 72 88.9
CAN.G219.18 Capsicum annuum HOM05D000216 ORTHO05D000634 6.8e-32 141.0 70 88.6
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 8.8e-32 140.6 70 88.6
Potri.013G140850 Populus trichocarpa HOM05D000216 ORTHO05D000634 1.2e-31 140.2 70 87.1
Potri.019G027860 Populus trichocarpa HOM05D000216 ORTHO05D000634 1.2e-31 140.2 71 87.3
Medtr3g062770 Medicago truncatula HOM05D000216 ORTHO05D000634 1.5e-31 139.8 71 85.9
Medtr3g062790 Medicago truncatula HOM05D000216 ORTHO05D000634 1.5e-31 139.8 71 85.9
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 1.5e-31 139.8 71 85.9
Lalb_Chr09g0335401 Lupinus albus HOM05D000216 ORTHO05D000634 2.6e-31 139.0 72 86.1
Gorai.005G167700 Gossypium raimondii HOM05D000216 ORTHO05D001131 5.7e-31 137.9 72 84.7
Psat7g026840 Pisum sativum HOM05D000216 ORTHO05D001131 5.7e-31 137.9 72 86.1
Psat0s6357g0040 Pisum sativum HOM05D000216 ORTHO05D001131 7.5e-31 137.5 71 85.9
DCAR_032475 Daucus carota HOM05D000216 ORTHO05D000634 9.7e-31 137.1 70 87.1
arahy.Tifrunner.gnm1.ann1.YJD706 Arachis hypogaea HOM05D000216 ORTHO05D000634 1.7e-30 136.3 72 84.7
LjContig00489g0016986 Lotus japonicus HOM05D000216 ORTHO05D000634 1.7e-30 136.3 70 85.7
Hund27655 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.8e-30 134.8 70 82.9
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.8e-30 134.8 70 82.9
BolSC44t60848H Brassica oleracea HOM05D000216 ORTHO05D000634 1.1e-29 133.7 66 87.9
CSS0028306 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D000634 1.1e-29 133.7 67 89.6
HanXRQChr13g0417241 Helianthus annuus HOM05D000216 ORTHO05D001131 2.0e-28 129.4 71 81.7
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 2.7e-28 129.0 71 80.3
HanXRQChr00c0823g0577611 Helianthus annuus HOM05D000216 ORTHO05D000634 5.9e-28 127.9 69 82.6
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 5.9e-28 127.9 69 82.6
Gohir.D13G173125 Gossypium hirsutum HOM05D000216 ORTHO05D000634 7.7e-28 127.5 72 79.2
Lsat_1_v5_gn_1_96161 Lactuca sativa HOM05D000216 ORTHO05D000634 1.7e-27 126.3 71 78.9
Lsat_1_v5_gn_8_1820 Lactuca sativa HOM05D000216 ORTHO05D000634 1.7e-27 126.3 71 78.9
Sed0020606 Sechium edule HOM05D000216 ORTHO05D000634 1.7e-27 126.3 66 84.8
Lalb_Chr24g0400921 Lupinus albus HOM05D000216 ORTHO05D000634 3.8e-27 125.2 75 77.3
RcHm_v2.0_Chr2g0102161 Rosa chinensis HOM05D000216 ORTHO05D000634 6.5e-27 124.4 64 85.9
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 1.1e-26 123.6 72 75.0
BraSC140t45599Z Brassica rapa HOM05D000216 ORTHO05D000634 2.5e-26 122.5 61 90.2
Gorai.009G384300 Gossypium raimondii HOM05D000216 ORTHO05D000634 1.2e-23 113.6 72 70.8
Gorai.013G187400 Gossypium raimondii HOM05D000216 ORTHO05D000634 7.5e-23 110.9 61 78.7
FAN17G2339 Fragaria x ananassa HOM05D000216 ORTHO05D000634 9.8e-23 110.5 54 90.7
Solyc12g035870.3 Solanum lycopersicum HOM05D000216 ORTHO05D001131 1.7e-22 109.8 62 79.0
Migut.K00995 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.8e-21 106.3 65 73.8
Nitab4.5_0000172g0250 Nicotiana tabacum HOM05D000216 ORTHO05D001131 1.0e-19 100.5 66 72.7
Gorai.008G192200 Gossypium raimondii HOM05D000216 ORTHO05D000634 1.5e-18 96.7 56 76.8
C02p28760 Brassica napus HOM05D000216 ORTHO05D000634 3.3e-18 95.5 52 78.8
Gohir.D12G179260 Gossypium hirsutum HOM05D000216 ORTHO05D000634 3.6e-17 92.0 61 68.9
BolC7t41733H Brassica oleracea HOM05D000216 ORTHO05D000634 1.8e-16 89.7 42 90.5
BolSC49t61197H Brassica oleracea HOM05D000216 ORTHO05D000634 1.8e-16 89.7 42 90.5
Mapoly0093s0044 Marchantia polymorpha HOM05D000216 ORTHO05D000634 5.7e-15 84.7 61 63.9
Migut.D01416 Erythranthe guttata HOM05D000216 ORTHO05D000634 2.2e-14 82.8 41 87.8
Mapoly0093s0045 Marchantia polymorpha HOM05D000216 ORTHO05D000634 2.8e-14 82.4 60 61.7
Hund21335 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.4e-13 78.2 41 80.5
SMO168G0002 Selaginella moellendorffii HOM05D000216 ORTHO05D000634 2.0e-12 76.3 68 51.5
SMO086G0006 Selaginella moellendorffii HOM05D000216 ORTHO05D000634 2.7e-12 75.9 66 51.5
Solyc01g017370.2 Solanum lycopersicum HOM05D000216 ORTHO05D000634 5.9e-12 74.7 52 63.5
arahy.Tifrunner.gnm1.ann1.ITK2CB Arachis hypogaea HOM05D000388 ORTHO05D000473 7.8e-12 74.3 44 77.3
Lsat_1_v5_gn_1_118640 Lactuca sativa HOM05D000216 ORTHO05D000634 2.3e-11 72.8 39 82.1
Solyc12g062563.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.9e-11 72.4 42 71.4
Solyc07g021205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 7.3e-10 67.8 41 63.4
CARHR181340 Cardamine hirsuta HOM05D000216 ORTHO05D000634 1.4e-08 63.5 30 93.3
HanXRQChr00c0994g0578181 Helianthus annuus HOM05D000216 ORTHO05D000634 2.0e-07 59.7 29 82.8
Pp3c19_12990 Physcomitrium patens HOM05D000216 ORTHO05D000634 9.8e-07 57.4 46 58.7


User provided reference genes

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