Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_6g06441 Fragaria vesca HOM05D000246 ORTHO05D007179 5.2e-156 554.3 273 100.0
FAN05G4756 Fragaria x ananassa HOM05D000246 ORTHO05D007179 2.8e-72 276.2 191 80.1
RcHm_v2.0_Chr3g0455521 Rosa chinensis HOM05D000246 ORTHO05D007179 3.5e-67 259.2 214 68.7
FAN05G3600 Fragaria x ananassa HOM05D000246 ORTHO05D007179 3.0e-66 256.1 237 63.7
FAN02G0914 Fragaria x ananassa HOM05D000246 ORTHO05D007179 1.9e-65 253.4 237 63.3
FvH4_6g06440 Fragaria vesca HOM05D000246 ORTHO05D007179 1.2e-64 250.8 211 66.4
FAN14G0626 Fragaria x ananassa HOM05D000246 ORTHO05D007179 1.1e-63 247.7 211 65.9
MD04G1201600 Malus domestica HOM05D000246 ORTHO05D007179 2.3e-55 219.9 239 54.0
Prupe.6G321800 Prunus persica HOM05D000246 ORTHO05D007179 2.9e-53 213.0 241 53.1
CiPaw.08G162700 Carya illinoinensis HOM05D000246 ORTHO05D007179 4.2e-44 182.6 244 46.7
Ciclev10000234m.g Citrus clementina HOM05D000246 ORTHO05D007179 6.6e-42 175.3 238 46.6
Cfa006619 Carpinus fangiana HOM05D000246 ORTHO05D007179 8.7e-42 174.9 274 43.1
GSVIVG01031124001 Vitis vinifera HOM05D001472 ORTHO05D002655 3.3e-41 172.9 199 48.7
arahy.Tifrunner.gnm1.ann1.JYY4I0 Arachis hypogaea HOM05D000246 ORTHO05D007179 1.6e-40 170.6 240 42.9
Haze_04155 Corylus avellana HOM05D000246 ORTHO05D007179 1.6e-40 170.6 241 43.2
arahy.Tifrunner.gnm1.ann1.K95L4M Arachis hypogaea HOM05D000246 ORTHO05D007179 2.8e-40 169.9 240 43.8
Psat6g150320 Pisum sativum HOM05D000246 ORTHO05D007179 3.6e-40 169.5 240 42.5
Sabra05G0031700 Salix brachista HOM05D000359 ORTHO05D007179 3.6e-40 169.5 270 39.3
Ca_10124_v3 Cicer arietinum L. HOM05D000246 ORTHO05D007179 2.4e-39 166.8 242 43.8
arahy.Tifrunner.gnm1.ann1.G0LK44 Arachis hypogaea HOM05D000246 ORTHO05D007179 5.3e-39 165.6 245 42.9
CANSAT54G2417 Cannabis sativa HOM05D000246 ORTHO05D007179 5.3e-39 165.6 232 42.7
MELO3C004226.2 Cucumis melo HOM05D000246 ORTHO05D007179 6.9e-39 165.2 236 41.9
Thecc.05G311900 Theobroma cacao HOM05D000246 ORTHO05D007179 6.9e-39 165.2 216 44.0
ClCG02G015470 Citrullus lanatus HOM05D000246 ORTHO05D007179 1.2e-38 164.5 237 42.6
Manes.08G118800 Manihot esculenta HOM05D000246 ORTHO05D007179 2.0e-38 163.7 206 44.7
Sopen01g043000 Solanum pennellii HOM05D000246 ORTHO05D007179 2.0e-38 163.7 227 43.2
TWI56G0873 Tripterygium wilfordii HOM05D000246 ORTHO05D007179 2.6e-38 163.3 207 44.0
TPR.G6096 Trifolium pratense HOM05D000246 ORTHO05D007179 7.6e-38 161.8 252 40.5
Atru.chr2.19 Acer truncatum HOM05D000246 ORTHO05D007179 9.9e-38 161.4 235 43.8
ECA240G0991 Erigeron canadensis HOM05D000246 ORTHO05D007179 1.3e-37 161.0 178 48.9
Duzib177G0836 Durio zibethinus HOM05D000246 ORTHO05D007179 1.7e-37 160.6 240 41.2
Nitab4.5_0008329g0030 Nicotiana tabacum HOM05D000246 ORTHO05D007179 1.7e-37 160.6 227 42.3
PGR031G3950 Punica granatum HOM05D000246 ORTHO05D007179 2.2e-37 160.2 231 41.1
CAN.G1652.4 Capsicum annuum HOM05D000246 ORTHO05D007179 3.8e-37 159.5 213 43.7
Potri.005G026400 Populus trichocarpa HOM05D000246 ORTHO05D007179 6.4e-37 158.7 205 44.4
CsaV3_2G006600 Cucumis sativus L. HOM05D000246 ORTHO05D007179 1.1e-36 157.9 237 41.4
Gohir.A11G267000 Gossypium hirsutum HOM05D000246 ORTHO05D007179 1.1e-36 157.9 201 45.3
Lj5A431G15 Lonicera japonica HOM05D000246 ORTHO05D007179 1.1e-36 157.9 211 45.5
Medtr1g083250 Medicago truncatula HOM05D000246 ORTHO05D007179 1.4e-36 157.5 200 44.5
Sed0014533 Sechium edule HOM05D000246 ORTHO05D007179 1.4e-36 157.5 237 44.7
Gorai.007G299200 Gossypium raimondii HOM05D000246 ORTHO05D007179 2.4e-36 156.8 201 44.8
Oeu012115.1 Olea europaea HOM05D000246 ORTHO05D007179 2.4e-36 156.8 200 44.0
Lj5A421T62 Lonicera japonica HOM05D000246 ORTHO05D007179 3.2e-36 156.4 189 47.6
Actinidia05681 Actinidia chinensis HOM05D000246 ORTHO05D007179 4.2e-36 156.0 191 46.1
Glyma.20G236000 Glycine max HOM05D000246 ORTHO05D007179 7.1e-36 155.2 240 41.7
QL03p021621 Quercus lobata HOM05D000246 ORTHO05D007179 7.1e-36 155.2 203 44.3
QL03p021635 Quercus lobata HOM05D000246 ORTHO05D007179 7.1e-36 155.2 203 44.3
TAR633G0108 Trochodendron aralioides HOM05D000246 ORTHO05D007179 1.2e-35 154.5 252 39.7
Nitab4.5_0002344g0100 Nicotiana tabacum HOM05D000246 ORTHO05D007179 2.1e-35 153.7 186 46.2
Migut.B01029 Erythranthe guttata HOM05D000246 ORTHO05D007179 2.7e-35 153.3 235 41.7
PSO170G0679 Papaver somniferum HOM05D000246 ORTHO05D007179 2.7e-35 153.3 236 42.4
Gohir.D11G277100 Gossypium hirsutum HOM05D000246 ORTHO05D007179 4.6e-35 152.5 201 43.8
Lj5g0018456 Lotus japonicus HOM05D000246 ORTHO05D007179 1.3e-34 151.0 187 44.4
vmacro04965 Vaccinium macrocarpon HOM05D000246 ORTHO05D007179 1.3e-34 151.0 183 47.5
Aqoxy2G03005 Aquilegia oxysepala HOM05D000246 ORTHO05D007179 1.7e-34 150.6 219 42.0
Cpa.g.sc48.83 Carica papaya HOM05D000246 ORTHO05D007179 1.7e-34 150.6 226 42.5
CSS0043712 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007179 2.3e-34 150.2 231 40.7
Eucgr.L01168 Eucalyptus grandis HOM05D000246 ORTHO05D007179 3.0e-34 149.8 158 50.0
HanXRQChr03g0072511 Helianthus annuus HOM05D000246 ORTHO05D007179 5.1e-34 149.1 227 44.1
PSO210G2254 Papaver somniferum HOM05D000246 ORTHO05D007179 5.1e-34 149.1 236 42.4
COL.COLO4_10505 Corchorus olitorius HOM05D000246 ORTHO05D007179 8.7e-34 148.3 213 42.3
Lalb_Chr21g0310621 Lupinus albus HOM05D000246 ORTHO05D007179 2.5e-33 146.7 241 39.8
Lsat_1_v5_gn_9_123801 Lactuca sativa HOM05D000246 ORTHO05D007179 3.3e-33 146.4 187 46.0
Peaxi162Scf00037g00932 Petunia axillaris HOM05D000246 ORTHO05D007179 3.3e-33 146.4 128 59.4
Nn3g21421 Nelumbo nucifera HOM05D000246 ORTHO05D007179 7.3e-33 145.2 239 41.4
Cc00_g10440 Coffea canephora HOM05D000246 ORTHO05D007179 1.3e-32 144.4 207 40.6
Phvul.007G196600 Phaseolus vulgaris HOM05D000246 ORTHO05D007179 2.1e-32 143.7 248 40.7
EL10Ac4g09931 Beta vulgaris HOM05D000246 ORTHO05D007179 3.6e-32 142.9 225 42.2
AUR62000778 Chenopodium quinoa HOM05D000246 ORTHO05D007179 2.4e-31 140.2 200 43.5
Hund21703 Selenicereus undatus HOM05D000246 ORTHO05D007179 2.0e-30 137.1 201 41.3
AUR62005191 Chenopodium quinoa HOM05D000246 ORTHO05D007179 3.8e-29 132.9 200 43.0
VMungo0720G1388 Vigna mungo HOM05D000246 ORTHO05D007179 3.8e-29 132.9 241 39.0
MBI19_g18874_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D007179 1.4e-28 131.0 198 37.9
AL6G39350 Arabidopsis lyrata HOM05D000246 ORTHO05D007179 3.0e-26 123.2 203 39.9
CSS0044658 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007179 3.0e-26 123.2 143 46.9
CDE01G0473 Ceratophyllum demersum HOM05D000246 ORTHO05D007179 5.1e-26 122.5 220 35.9
Aa31LG11G9420 Aethionema arabicum HOM05D000246 ORTHO05D007179 2.5e-25 120.2 227 33.5
DCAR_003348 Daucus carota HOM05D000246 ORTHO05D007179 3.3e-25 119.8 196 38.8
Carub.0006s2490 Capsella rubella HOM05D000246 ORTHO05D007179 1.6e-24 117.5 202 37.1
CARHR186200 Cardamine hirsuta HOM05D000246 ORTHO05D007179 1.6e-24 117.5 163 41.1
AT5G27680 Arabidopsis thaliana HOM05D000246 ORTHO05D007179 1.8e-23 114.0 161 38.5
C07p41090 Brassica napus HOM05D000246 ORTHO05D007179 1.8e-23 114.0 233 33.9
BolC7t44636H Brassica oleracea HOM05D000246 ORTHO05D007179 1.8e-23 114.0 233 33.9
HPP92_010691 Vanilla planifolia HOM05D000246 ORTHO05D007179 2.4e-23 113.6 244 33.6
ATR0210G017 Amborella trichopoda HOM05D000246 ORTHO05D007179 3.1e-23 113.2 225 31.1
Thhalv10003644m.g Eutrema salsugineum HOM05D000246 ORTHO05D007179 9.0e-23 111.7 228 34.2
A06p37370 Brassica napus HOM05D000246 ORTHO05D007179 1.3e-21 107.8 188 35.1
BraA06t26661Z Brassica rapa HOM05D000246 ORTHO05D007179 1.3e-21 107.8 192 34.4
Zm00001eb354210 Zea mays HOM05D000246 ORTHO05D007179 3.8e-21 106.3 200 35.0
Rhsim07G0187000 Rhododendron simsii HOM05D000246 ORTHO05D007179 2.7e-19 100.1 274 30.7
Eucgr.L01167 Eucalyptus grandis HOM05D000246 ORTHO05D007179 3.5e-19 99.8 178 34.8
MBI19_g41249_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D007179 6.0e-19 99.0 158 34.2
Eucgr.F00584 Eucalyptus grandis HOM05D000246 ORTHO05D007179 3.0e-18 96.7 180 33.9
Dinv40318 Davidia involucrata HOM05D000246 ORTHO05D007179 5.7e-17 92.4 101 51.5
SHI18110 Sapria himalayana HOM05D000246 ORTHO05D007179 1.3e-16 91.3 125 42.4
Solyc01g099470.3 Solanum lycopersicum HOM05D000246 ORTHO05D007179 2.8e-16 90.1 101 48.5
Aqoxy2G02800 Aquilegia oxysepala HOM05D000246 ORTHO05D007179 1.5e-14 84.3 79 53.2
Solyc01g099460.3 Solanum lycopersicum HOM05D000246 ORTHO05D007179 1.3e-13 81.3 146 36.3
SEGI_40367 Sequoiadendron giganteum HOM05D000246 ORTHO05D007179 2.1e-11 73.9 224 28.1
Solyc02g088430.1 Solanum lycopersicum HOM05D000246 ORTHO05D007179 2.1e-11 73.9 140 32.9
Pp3c20_2130 Physcomitrium patens HOM05D000246 ORTHO05D007179 9.7e-09 65.1 119 33.6
Sp2g20840 Schrenkiella parvula HOM05D000246 ORTHO05D007179 2.2e-08 63.9 184 30.4


User provided reference genes

Program Settings