Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g07462 Fragaria vesca HOM05D006543 ORTHO05D008308 3.4e-200 701.4 347 100.0
FvH4_5g07331 Fragaria vesca HOM05D006543 ORTHO05D008308 7.1e-182 640.6 382 86.6
RcHm_v2.0_Chr7g0191211 Rosa chinensis HOM05D006543 ORTHO05D008308 2.4e-174 615.5 382 82.2
MD14G1163800 Malus domestica HOM05D006543 ORTHO05D008308 2.1e-157 559.3 382 74.6
Prupe.5G157200 Prunus persica HOM05D006543 ORTHO05D008308 3.5e-157 558.5 382 75.4
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 1.9e-150 536.2 382 70.2
QL10p005246 Quercus lobata HOM05D006543 ORTHO05D008308 1.6e-149 533.1 381 70.6
Atru.chr9.1008 Acer truncatum HOM05D006543 ORTHO05D008308 6.7e-148 527.7 382 69.1
CiPaw.11G012100 Carya illinoinensis HOM05D006543 ORTHO05D008308 1.8e-145 519.6 382 68.3
Manes.06G115100 Manihot esculenta HOM05D006543 ORTHO05D008308 1.8e-145 519.6 380 68.9
Ciclev10020014m.g Citrus clementina HOM05D006543 ORTHO05D008308 3.1e-145 518.8 377 69.0
CANSAT80G2173 Cannabis sativa HOM05D006543 ORTHO05D008308 6.9e-145 517.7 384 68.5
Sabra12G0067500 Salix brachista HOM05D006543 ORTHO05D008308 6.9e-145 517.7 380 67.6
Hma1.2p1_0046F.1_g027560 Hydrangea macrophylla HOM05D006543 ORTHO05D008308 1.5e-144 516.5 382 67.5
Potri.012G092900 Populus trichocarpa HOM05D006543 ORTHO05D008308 1.0e-143 513.8 380 67.6
Thecc.03G122600 Theobroma cacao HOM05D006543 ORTHO05D008308 5.5e-142 508.1 382 67.5
TWI14G0972 Tripterygium wilfordii HOM05D006543 ORTHO05D008308 5.5e-142 508.1 380 67.1
Actinidia37252 Actinidia chinensis HOM05D006543 ORTHO05D008308 1.2e-141 506.9 380 67.6
Duzib068G0092 Durio zibethinus HOM05D006543 ORTHO05D008308 2.1e-141 506.1 380 66.1
GSVIVG01007545001 Vitis vinifera HOM05D006543 ORTHO05D008308 2.7e-141 505.8 362 70.2
vmacro16708 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 2.3e-140 502.7 382 66.8
TAR374G1424 Trochodendron aralioides HOM05D006543 ORTHO05D008308 3.9e-140 501.9 382 66.0
COL.COLO4_09265 Corchorus olitorius HOM05D006543 ORTHO05D008308 5.1e-140 501.5 382 65.7
CsaV3_1G000810 Cucumis sativus L. HOM05D006543 ORTHO05D008308 3.3e-139 498.8 380 66.1
MELO3C026233.2 Cucumis melo HOM05D006543 ORTHO05D008308 1.7e-138 496.5 380 65.8
Hund18538 Selenicereus undatus HOM05D006543 ORTHO05D008308 1.1e-137 493.8 382 64.1
arahy.Tifrunner.gnm1.ann1.8LT8QW Arachis hypogaea HOM05D006543 ORTHO05D008308 3.1e-137 492.3 379 64.6
Lj5A100T59 Lonicera japonica HOM05D006543 ORTHO05D008308 3.1e-137 492.3 382 63.4
Rhsim12G0172000 Rhododendron simsii HOM05D006543 ORTHO05D008308 2.6e-136 489.2 382 65.2
AL8G40370 Arabidopsis lyrata HOM05D006543 ORTHO05D008308 7.7e-136 487.6 383 64.5
CSS0036636 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 1.0e-135 487.3 380 65.3
Lalb_Chr08g0236931 Lupinus albus HOM05D006543 ORTHO05D008308 1.3e-135 486.9 379 64.4
Aqoxy5G03584 Aquilegia oxysepala HOM05D006543 ORTHO05D008308 1.7e-135 486.5 383 64.2
HanXRQChr05g0154751 Helianthus annuus HOM05D006543 ORTHO05D008308 1.7e-135 486.5 382 62.3
arahy.Tifrunner.gnm1.ann1.YD5AXN Arachis hypogaea HOM05D006543 ORTHO05D008308 2.2e-135 486.1 379 63.9
ECA246G2708 Erigeron canadensis HOM05D006543 ORTHO05D008308 3.8e-135 485.3 382 62.8
PGR044G1877 Punica granatum HOM05D006543 ORTHO05D008308 1.9e-134 483.0 383 64.0
AT5G63290 Arabidopsis thaliana HOM05D006543 ORTHO05D008308 3.2e-134 482.3 383 63.7
Sed0023544 Sechium edule HOM05D006543 ORTHO05D008308 5.5e-134 481.5 380 65.0
TPR.G24245 Trifolium pratense HOM05D006543 ORTHO05D008308 5.5e-134 481.5 376 63.8
Sopen03g030490 Solanum pennellii HOM05D006543 ORTHO05D008308 7.2e-134 481.1 382 62.8
Carub.0008s2404 Capsella rubella HOM05D006543 ORTHO05D008308 1.2e-133 480.3 383 63.2
Medtr3g075110 Medicago truncatula HOM05D006543 ORTHO05D008308 2.7e-133 479.2 382 62.6
Solyc03g111360.3 Solanum lycopersicum HOM05D006543 ORTHO05D008308 2.7e-133 479.2 382 62.6
Nitab4.5_0004750g0040 Nicotiana tabacum HOM05D006543 ORTHO05D008308 6.1e-133 478.0 382 62.8
CAN.G352.10 Capsicum annuum HOM05D006543 ORTHO05D008308 1.0e-132 477.2 383 63.2
Oeu045480.1 Olea europaea HOM05D006543 ORTHO05D008308 1.0e-132 477.2 382 62.6
Peaxi162Scf00089g00625 Petunia axillaris HOM05D006543 ORTHO05D008308 1.8e-132 476.5 376 64.4
Thhalv10004112m.g Eutrema salsugineum HOM05D006543 ORTHO05D008308 2.3e-132 476.1 383 62.9
Psat5g141840 Pisum sativum HOM05D006543 ORTHO05D008308 3.0e-132 475.7 381 61.9
Glyma.04G192800 Glycine max HOM05D006543 ORTHO05D008308 3.9e-132 475.3 381 62.5
Gorai.006G270300 Gossypium raimondii HOM05D006543 ORTHO05D008308 6.7e-132 474.6 378 63.5
PGSC0003DMG400015239 Solanum tuberosum HOM05D006543 ORTHO05D008308 1.1e-131 473.8 382 61.8
Phvul.009G169000 Phaseolus vulgaris HOM05D006543 ORTHO05D008308 2.0e-131 473.0 379 62.5
BcaNung06574 Brassica carinata HOM05D006543 ORTHO05D008308 3.3e-131 472.2 381 63.0
Gohir.A09G244900 Gossypium hirsutum HOM05D006543 ORTHO05D008308 3.3e-131 472.2 382 62.8
Lj1g0002208 Lotus japonicus HOM05D006543 ORTHO05D008308 3.3e-131 472.2 381 62.7
Sp2g26410 Schrenkiella parvula HOM05D006543 ORTHO05D008308 4.4e-131 471.9 383 62.7
Lsat_1_v5_gn_5_13221 Lactuca sativa HOM05D006543 ORTHO05D008308 7.4e-131 471.1 381 61.4
A09p08200 Brassica napus HOM05D006543 ORTHO05D008308 9.7e-131 470.7 384 62.5
BraA09t36471Z Brassica rapa HOM05D006543 ORTHO05D008308 9.7e-131 470.7 384 62.5
MBI06_g38704_MAGBIO Magnolia biondii HOM05D006543 ORTHO05D008308 1.7e-130 469.9 387 62.5
Nitab4.5_0003282g0090 Nicotiana tabacum HOM05D006543 ORTHO05D008308 4.8e-130 468.4 382 61.3
ClCG06G017630 Citrullus lanatus HOM05D006543 ORTHO05D008308 6.3e-130 468.0 380 62.4
THA.LOC104818195 Tarenaya hassleriana HOM05D006543 ORTHO05D008308 1.4e-129 466.8 381 62.2
C09p09260 Brassica napus HOM05D006543 ORTHO05D008308 1.8e-129 466.5 381 62.5
BolC9t53839H Brassica oleracea HOM05D006543 ORTHO05D008308 2.4e-129 466.1 381 62.5
AUR62025730 Chenopodium quinoa HOM05D006543 ORTHO05D008308 5.3e-129 464.9 382 59.9
Cc04_g10340 Coffea canephora HOM05D006543 ORTHO05D008308 1.2e-128 463.8 379 62.3
Gohir.D09G245800 Gossypium hirsutum HOM05D006543 ORTHO05D008308 3.5e-128 462.2 374 62.6
Aa31LG1G18710 Aethionema arabicum HOM05D006543 ORTHO05D008308 7.7e-128 461.1 383 61.4
AUR62001276 Chenopodium quinoa HOM05D006543 ORTHO05D008308 7.7e-128 461.1 382 59.2
MSTRG.11294 Avicennia marina HOM05D006543 ORTHO05D008308 2.2e-127 459.5 382 61.5
EL10Ac7g18072 Beta vulgaris HOM05D006543 ORTHO05D008308 2.5e-126 456.1 382 60.7
Sc04g0000970 Simmondsia chinensis HOM05D006543 ORTHO05D008308 3.1e-121 439.1 382 59.4
PSO729G0022 Papaver somniferum HOM05D006543 ORTHO05D008308 1.9e-118 429.9 381 58.3
Zm00001eb001600 Zea mays HOM05D006543 ORTHO05D008308 3.2e-118 429.1 383 56.9
Dinv11106 Davidia involucrata HOM05D006543 ORTHO05D008308 4.2e-118 428.7 319 68.7
unitig_22.g5878 Utricularia gibba HOM05D006543 ORTHO05D008308 5.5e-118 428.3 378 58.7
Migut.I00467 Erythranthe guttata HOM05D006543 ORTHO05D008308 3.6e-117 425.6 386 58.3
Ca_16091_v3 Cicer arietinum L. HOM05D006543 ORTHO05D008308 1.0e-116 424.1 338 63.3
Os12g0270100 Oryza sativa ssp. japonica HOM05D006543 ORTHO05D008308 6.8e-116 421.4 383 55.9
SGA_v2.0_scaffold338G49246 Striga asiatica HOM05D006543 ORTHO05D008308 5.7e-115 418.3 368 59.8
Ah.15g095320 Amaranthus hybridus HOM05D006543 ORTHO05D008308 1.8e-113 413.3 381 55.6
CDE04G0939 Ceratophyllum demersum HOM05D006543 ORTHO05D008308 3.1e-113 412.5 384 54.4
Lsat_1_v5_gn_4_53181 Lactuca sativa HOM05D006543 ORTHO05D008308 8.0e-109 397.9 395 53.9
VMungo1309G1872 Vigna mungo HOM05D006543 ORTHO05D008308 9.8e-107 391.0 316 61.7
SEGI_06622 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 3.3e-102 375.9 418 48.3
Pp3c13_23570 Physcomitrium patens HOM05D006543 ORTHO05D008308 1.5e-94 350.5 382 48.2
Mapoly0005s0190 Marchantia polymorpha HOM05D006543 ORTHO05D008308 1.2e-91 340.9 428 43.7
vmacro16659 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 4.4e-91 339.0 284 62.0
vmacro23154 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 3.2e-81 306.2 255 61.6
ATR0733G153 Amborella trichopoda HOM05D006543 ORTHO05D008308 1.1e-78 297.7 362 47.0
SMO364G0036 Selaginella moellendorffii HOM05D006543 ORTHO05D008308 7.3e-78 295.0 378 45.0
CBR_g58805 Chara braunii HOM05D006543 ORTHO05D008308 2.1e-77 293.5 335 47.2
MD06G1157200 Malus domestica HOM05D006543 ORTHO05D008308 2.8e-77 293.1 204 74.5
CSS0033277 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 1.8e-76 290.4 285 54.7
AagrBONN_evm.TU.Sc2ySwM_344.2040 Anthoceros agrestis HOM05D006543 ORTHO05D008308 2.2e-74 283.5 398 39.2
PRCOL_00001606 Prasinoderma coloniale HOM05D006543 ORTHO05D008308 4.1e-73 279.3 389 40.6
Cre03.g171461 Chlamydomonas reinhardtii HOM05D006543 ORTHO05D008308 5.4e-73 278.9 299 47.8
CARHR277150 Cardamine hirsuta HOM05D006543 ORTHO05D008308 2.1e-72 276.9 173 78.6
BcaB04g19911 Brassica carinata HOM05D006543 ORTHO05D008308 2.5e-70 270.0 173 76.9
Glyma.06G173133 Glycine max HOM05D006543 ORTHO05D008308 1.2e-69 267.7 239 57.3
MCO01G029 Micromonas commoda HOM05D006543 ORTHO05D008308 1.4e-68 264.2 390 41.5
Nn3g16581 Nelumbo nucifera HOM05D006543 ORTHO05D008308 1.6e-64 250.8 164 72.0
Actinidia36787 Actinidia chinensis HOM05D006543 ORTHO05D008308 4.6e-64 249.2 221 60.2
BcaB01g05367 Brassica carinata HOM05D006543 ORTHO05D008308 3.3e-54 216.5 218 54.6
CARHR277160 Cardamine hirsuta HOM05D006543 ORTHO05D008308 4.8e-53 212.6 210 51.4
Oeu045471.1 Olea europaea HOM05D006543 ORTHO05D008308 3.3e-46 189.9 118 73.7
Oeu037566.1 Olea europaea HOM05D006543 ORTHO05D008308 3.1e-44 183.3 118 72.9
SEGI_28812 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 1.0e-39 168.3 132 61.4
CAN.G352.9 Capsicum annuum HOM05D006543 ORTHO05D003127 3.0e-39 166.8 116 71.6
FvH4_5g07400 Fragaria vesca HOM05D006543 ORTHO05D008308 3.7e-37 159.8 108 77.8
Glyma.06G173067 Glycine max HOM05D006543 ORTHO05D008308 6.9e-28 129.0 93 67.7
MD06G1156000 Malus domestica HOM05D006543 ORTHO05D008308 1.0e-26 125.2 117 56.4
MD06G1152300 Malus domestica HOM05D006543 ORTHO05D008308 3.6e-16 90.1 200 34.5
MD06G1154400 Malus domestica HOM05D006543 ORTHO05D008308 7.9e-16 89.0 200 34.5
Cfa009975 Carpinus fangiana HOM05D006543 ORTHO05D008308 6.5e-10 69.3 44 75.0
BcaNung00695 Brassica carinata HOM05D000342 ORTHO05D000217 3.0e-07 60.5 33 78.8
C09p09270 Brassica napus HOM05D039327 ORTHO05D041005 5.2e-07 59.7 52 59.6
BolC9t53840H Brassica oleracea HOM05D039327 ORTHO05D041005 5.2e-07 59.7 52 59.6
CAN.G352.8 Capsicum annuum HOM05D006543 ORTHO05D008308 7.5e-06 55.8 52 50.0


User provided reference genes

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