Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g35230 Fragaria vesca HOM05D004433 ORTHO05D005251 6.4e-307 1056.6 539 100.0
FAN27G0398 Fragaria x ananassa HOM05D004433 ORTHO05D005251 4.6e-281 970.7 568 90.3
FAN15G3540 Fragaria x ananassa HOM05D004433 ORTHO05D005251 1.8e-245 852.4 575 81.4
RcHm_v2.0_Chr6g0306701 Rosa chinensis HOM05D004433 ORTHO05D005251 3.6e-241 838.2 544 80.3
FvH4_2g35220 Fragaria vesca HOM05D004433 ORTHO05D005251 5.2e-208 728.0 570 67.9
RcHm_v2.0_Chr6g0306711 Rosa chinensis HOM05D004433 ORTHO05D005251 9.2e-205 717.2 571 66.7
Cfa013388 Carpinus fangiana HOM05D004433 ORTHO05D005251 2.7e-204 715.7 576 67.4
FAN15G1676 Fragaria x ananassa HOM05D004433 ORTHO05D005251 3.0e-203 712.2 588 65.3
Prupe.1G444400 Prunus persica HOM05D004433 ORTHO05D005251 2.4e-200 702.6 579 65.8
MD08G1110200 Malus domestica HOM05D004433 ORTHO05D005251 1.5e-199 699.9 577 66.0
Thecc.09G048300 Theobroma cacao HOM05D004433 ORTHO05D005251 5.8e-199 698.0 534 69.9
Atru.chr7.2050 Acer truncatum HOM05D004433 ORTHO05D005251 7.6e-199 697.6 544 66.7
Duzib168G1809 Durio zibethinus HOM05D004433 ORTHO05D005251 9.9e-199 697.2 537 68.3
Glyma.14G144100 Glycine max HOM05D004433 ORTHO05D005251 1.7e-198 696.4 535 68.2
CANSAT21G1878 Cannabis sativa HOM05D004433 ORTHO05D005251 3.8e-198 695.3 537 68.7
Phvul.001G078300 Phaseolus vulgaris HOM05D004433 ORTHO05D005251 1.4e-197 693.3 539 67.7
CSS0005257 Camellia sinensis var. sinensis HOM05D004433 ORTHO05D005251 1.9e-197 693.0 528 68.2
CSS0005508 Camellia sinensis var. sinensis HOM05D004433 ORTHO05D005251 1.9e-197 693.0 528 68.2
Eucgr.C00613 Eucalyptus grandis HOM05D004433 ORTHO05D005251 2.4e-197 692.6 565 64.6
Duzib150G0295 Durio zibethinus HOM05D004433 ORTHO05D005251 9.3e-197 690.6 536 67.9
CiPaw.08G027400 Carya illinoinensis HOM05D004433 ORTHO05D005251 1.2e-196 690.3 550 66.9
TWI34G1917 Tripterygium wilfordii HOM05D004433 ORTHO05D005251 6.0e-196 688.0 537 67.2
arahy.Tifrunner.gnm1.ann1.AK26AV Arachis hypogaea HOM05D004433 ORTHO05D005251 1.3e-195 686.8 553 66.0
CANSAT21G2561 Cannabis sativa HOM05D004433 ORTHO05D005251 2.3e-195 686.0 536 68.5
Potri.018G057500 Populus trichocarpa HOM05D004433 ORTHO05D005251 3.0e-195 685.6 553 65.6
TAR639G0002 Trochodendron aralioides HOM05D004433 ORTHO05D005251 3.0e-195 685.6 551 65.9
Gohir.D06G090400 Gossypium hirsutum HOM05D004433 ORTHO05D005251 5.1e-195 684.9 537 67.4
GSVIVG01035316001 Vitis vinifera HOM05D004433 ORTHO05D005251 1.1e-194 683.7 556 64.4
PGR031G3150 Punica granatum HOM05D004433 ORTHO05D005251 2.5e-194 682.6 567 64.9
Gohir.A06G091200 Gossypium hirsutum HOM05D004433 ORTHO05D005251 7.3e-194 681.0 535 66.9
Ciclev10007803m.g Citrus clementina HOM05D004433 ORTHO05D005251 9.6e-194 680.6 579 63.0
QL12p040912 Quercus lobata HOM05D004433 ORTHO05D005251 9.6e-194 680.6 568 65.0
Ca_03360_v3 Cicer arietinum L. HOM05D004433 ORTHO05D005251 1.6e-193 679.9 539 66.8
VMungo1383G1648 Vigna mungo HOM05D004433 ORTHO05D005251 2.8e-193 679.1 541 65.8
Prupe.1G444500 Prunus persica HOM05D004433 ORTHO05D005251 4.8e-193 678.3 565 65.1
Dinv27935 Davidia involucrata HOM05D004433 ORTHO05D005251 1.8e-192 676.4 528 67.4
FAN20G2992 Fragaria x ananassa HOM05D004433 ORTHO05D005251 1.8e-192 676.4 578 63.7
Oeu019243.1 Olea europaea HOM05D004433 ORTHO05D005251 3.1e-192 675.6 505 68.9
Gorai.010G104100 Gossypium raimondii HOM05D004433 ORTHO05D005251 1.5e-191 673.3 563 64.3
Aqoxy5G01364 Aquilegia oxysepala HOM05D004433 ORTHO05D005251 4.5e-191 671.8 546 65.4
Thhalv10001936m.g Eutrema salsugineum HOM05D004433 ORTHO05D005251 9.9e-191 670.6 569 62.4
ClCG11G015050 Citrullus lanatus HOM05D004433 ORTHO05D005251 2.9e-190 669.1 496 69.8
Medtr1g007320 Medicago truncatula HOM05D004433 ORTHO05D005251 6.4e-190 667.9 514 67.9
Nn8g39044 Nelumbo nucifera HOM05D004433 ORTHO05D005251 1.4e-189 666.8 520 66.7
BcaB06g29637 Brassica carinata HOM05D004433 ORTHO05D005251 2.4e-189 666.0 575 61.2
BolC4t27102H Brassica oleracea HOM05D004433 ORTHO05D005251 2.4e-189 666.0 575 61.2
BraA04t17590Z Brassica rapa HOM05D004433 ORTHO05D005251 3.2e-189 665.6 565 61.6
A04p20080 Brassica napus HOM05D004433 ORTHO05D005251 5.4e-189 664.8 565 61.9
Lj1g0025930 Lotus japonicus HOM05D004433 ORTHO05D005251 5.4e-189 664.8 510 68.2
Sp4g05710 Schrenkiella parvula HOM05D004433 ORTHO05D005251 5.4e-189 664.8 563 61.8
C04p55760 Brassica napus HOM05D004433 ORTHO05D005251 9.3e-189 664.1 575 61.0
Sed0005675 Sechium edule HOM05D004433 ORTHO05D005251 1.2e-188 663.7 515 67.2
MSTRG.25921 Avicennia marina HOM05D004433 ORTHO05D005251 6.0e-188 661.4 499 66.1
MELO3C003474.2 Cucumis melo HOM05D004433 ORTHO05D005251 1.0e-187 660.6 529 65.8
Actinidia14688 Actinidia chinensis HOM05D004433 ORTHO05D005251 3.0e-187 659.1 551 64.6
BcaB06g29638 Brassica carinata HOM05D004433 ORTHO05D005251 6.7e-187 657.9 565 60.5
Psat6g036080 Pisum sativum HOM05D004433 ORTHO05D005251 8.7e-187 657.5 544 64.5
Sc23g0005440 Simmondsia chinensis HOM05D004433 ORTHO05D005251 1.1e-186 657.1 496 66.3
Lalb_Chr22g0360911 Lupinus albus HOM05D004433 ORTHO05D005251 1.5e-186 656.8 496 67.5
vmacro00182 Vaccinium macrocarpon HOM05D004433 ORTHO05D005251 4.3e-186 655.2 510 66.5
Aa31LG5G9810 Aethionema arabicum HOM05D004433 ORTHO05D005251 5.6e-186 654.8 539 62.5
Carub.0004s0569 Capsella rubella HOM05D004433 ORTHO05D005251 5.6e-186 654.8 567 61.2
FAN27G1484 Fragaria x ananassa HOM05D004433 ORTHO05D005251 5.6e-186 654.8 607 60.5
AT2G25870 Arabidopsis thaliana HOM05D004433 ORTHO05D005251 7.4e-186 654.4 570 60.2
Migut.A00179 Erythranthe guttata HOM05D004433 ORTHO05D005251 1.3e-185 653.7 552 62.9
CsaV3_3G048450 Cucumis sativus L. HOM05D004433 ORTHO05D005251 2.8e-185 652.5 529 64.7
Nitab4.5_0008242g0010 Nicotiana tabacum HOM05D004433 ORTHO05D005251 4.8e-185 651.7 543 63.0
TPR.G24519 Trifolium pratense HOM05D004433 ORTHO05D005251 8.1e-185 651.0 516 66.7
AL4G17700 Arabidopsis lyrata HOM05D004433 ORTHO05D005251 1.4e-184 650.2 567 61.6
CAN.G1444.6 Capsicum annuum HOM05D004433 ORTHO05D005251 1.4e-184 650.2 514 65.8
CARHR115360 Cardamine hirsuta HOM05D004433 ORTHO05D005251 1.4e-184 650.2 573 60.2
PSO210G3373 Papaver somniferum HOM05D004433 ORTHO05D005251 2.0e-183 646.4 492 67.7
Sopen08g019860 Solanum pennellii HOM05D004433 ORTHO05D005251 4.9e-182 641.7 531 63.1
Solyc08g066180.3 Solanum lycopersicum HOM05D004433 ORTHO05D005251 1.4e-181 640.2 514 64.2
HanXRQChr02g0047921 Helianthus annuus HOM05D004433 ORTHO05D005251 2.5e-181 639.4 521 63.0
THA.LOC104818595 Tarenaya hassleriana HOM05D004433 ORTHO05D005251 3.2e-181 639.0 551 60.6
ATR0705G146 Amborella trichopoda HOM05D004433 ORTHO05D005251 7.1e-181 637.9 520 63.8
arahy.Tifrunner.gnm1.ann1.YGB7WG Arachis hypogaea HOM05D004433 ORTHO05D005251 7.1e-181 637.9 550 62.7
CDE09G0966 Ceratophyllum demersum HOM05D004433 ORTHO05D005251 7.1e-181 637.9 540 62.4
Ah.10g034740 Amaranthus hybridus HOM05D004433 ORTHO05D005251 6.7e-179 631.3 507 61.5
AUR62040221 Chenopodium quinoa HOM05D004433 ORTHO05D005251 6.7e-179 631.3 508 62.8
AUR62009222 Chenopodium quinoa HOM05D004433 ORTHO05D005251 8.7e-179 630.9 508 63.2
ECA233G5497 Erigeron canadensis HOM05D004433 ORTHO05D005251 8.7e-179 630.9 512 62.9
Lsat_1_v5_gn_6_7781 Lactuca sativa HOM05D004433 ORTHO05D005251 3.7e-177 625.5 514 63.4
Lj7C697T10 Lonicera japonica HOM05D004433 ORTHO05D005251 1.8e-176 623.2 477 65.4
Nitab4.5_0000318g0140 Nicotiana tabacum HOM05D004433 ORTHO05D005251 7.6e-175 617.8 556 60.1
SalBow4G2164 Salvia bowleyana HOM05D004433 ORTHO05D005251 8.4e-174 614.4 515 62.3
COL.COLO4_21003 Corchorus olitorius HOM05D004433 ORTHO05D005251 1.8e-171 606.7 541 62.7
Actinidia18212 Actinidia chinensis HOM05D004433 ORTHO05D005251 3.9e-171 605.5 461 67.5
Peaxi162Scf00699g00520 Petunia axillaris HOM05D004433 ORTHO05D005251 5.1e-171 605.1 537 60.7
DCAR_003083 Daucus carota HOM05D004433 ORTHO05D005251 6.7e-171 604.7 527 61.1
SGA_v2.0_scaffold103G30047 Striga asiatica HOM05D004433 ORTHO05D005251 2.8e-169 599.4 639 54.0
MBI04_g07004_MAGBIO Magnolia biondii HOM05D004433 ORTHO05D005251 8.2e-169 597.8 567 59.4
Rhsim11G0049500 Rhododendron simsii HOM05D004433 ORTHO05D005251 1.4e-168 597.0 599 55.8
MD08G1110300 Malus domestica HOM05D004433 ORTHO05D005251 5.0e-166 588.6 426 71.8
Manes.03G060700 Manihot esculenta HOM05D004433 ORTHO05D005251 1.6e-164 583.6 510 61.0
Manes.16G073200 Manihot esculenta HOM05D004433 ORTHO05D005251 2.3e-163 579.7 553 58.2
Zm00001eb153790 Zea mays HOM05D004433 ORTHO05D005251 5.1e-163 578.6 488 60.0
EL10Ac2g03971 Beta vulgaris HOM05D004433 ORTHO05D005251 1.8e-160 570.1 507 59.2
Hund03376 Selenicereus undatus HOM05D004433 ORTHO05D005251 1.2e-159 567.4 459 63.2
Sabra18G0052000 Salix brachista HOM05D004433 ORTHO05D005251 2.9e-158 562.8 552 56.9
PSO210G0672 Papaver somniferum HOM05D004433 ORTHO05D005251 2.1e-148 530.0 492 59.3
Glyma.17G192300 Glycine max HOM05D004433 ORTHO05D005251 3.5e-143 512.7 418 65.8
Os01g0739400 Oryza sativa ssp. japonica HOM05D004433 ORTHO05D005251 3.3e-138 496.1 437 57.2
Dinv23396 Davidia involucrata HOM05D004433 ORTHO05D005251 2.4e-136 490.0 385 66.0
ATR1159G027 Amborella trichopoda HOM05D004433 ORTHO05D005251 1.6e-135 487.3 562 50.7
Pp3c15_25010 Physcomitrium patens HOM05D004433 ORTHO05D005251 3.2e-120 436.4 474 50.0
FAN20G0434 Fragaria x ananassa HOM05D004433 ORTHO05D005251 3.9e-118 429.5 253 92.5
unitig_32.g11476 Utricularia gibba HOM05D004433 ORTHO05D005251 5.0e-118 429.1 538 47.4
Mapoly0124s0034 Marchantia polymorpha HOM05D004433 ORTHO05D005251 8.3e-113 411.8 476 46.2
Os02g0227000 Oryza sativa ssp. japonica HOM05D004433 ORTHO05D005251 8.3e-113 411.8 441 48.1
Zm00001eb239610 Zea mays HOM05D004433 ORTHO05D005251 1.6e-108 397.5 474 45.4
Lj8A567T31 Lonicera japonica HOM05D004433 ORTHO05D005251 4.7e-108 396.0 344 61.0
HPP92_005557 Vanilla planifolia HOM05D004433 ORTHO05D005251 5.8e-106 389.0 421 51.8
Oeu008300.1 Olea europaea HOM05D004433 ORTHO05D005251 4.6e-103 379.4 503 46.7
CBR_g31496 Chara braunii HOM05D004433 ORTHO05D005251 3.1e-99 366.7 480 42.5
Haze_21925 Corylus avellana HOM05D004433 ORTHO05D005251 1.0e-94 351.7 381 55.1
Cc08_g09950 Coffea canephora HOM05D004433 ORTHO05D005251 2.8e-92 343.6 325 59.1
Ciclev10010169m.g Citrus clementina HOM05D004433 ORTHO05D005251 6.8e-91 339.0 456 47.1
Os09g0388400 Oryza sativa ssp. japonica HOM05D004433 ORTHO05D005251 9.9e-90 335.1 277 61.0
Ca_19223_v3 Cicer arietinum L. HOM05D004433 ORTHO05D005251 3.5e-87 326.6 266 65.0
Cc08_g09960 Coffea canephora HOM05D004433 ORTHO05D005251 1.3e-84 318.2 204 75.0
Cpa.g.sc7.220 Carica papaya HOM05D004433 ORTHO05D005251 8.1e-76 288.9 173 79.8
SEGI_35823 Sequoiadendron giganteum HOM05D004433 ORTHO05D005251 1.2e-71 275.0 202 64.9
SMO352G0038 Selaginella moellendorffii HOM05D004433 ORTHO05D005251 4.9e-65 253.1 262 48.9
PRCOL_00001006 Prasinoderma coloniale HOM05D004433 ORTHO05D005251 1.5e-61 241.5 392 36.7
MCO02G391 Micromonas commoda HOM05D004433 ORTHO05D005251 9.3e-56 222.2 285 45.3
HPP92_003623 Vanilla planifolia HOM05D004433 ORTHO05D005251 1.5e-50 204.9 215 50.7
SEGI_12418 Sequoiadendron giganteum HOM05D004433 ORTHO05D005251 7.7e-50 202.6 264 46.6
Ca_12764_v3 Cicer arietinum L. HOM05D004433 ORTHO05D005251 7.9e-47 192.6 177 58.8
Hund19490 Selenicereus undatus HOM05D004433 ORTHO05D005251 7.9e-47 192.6 128 72.7
CDE02G1264 Ceratophyllum demersum HOM05D004433 ORTHO05D005251 1.7e-44 184.9 136 64.7
Cre06.g252150 Chlamydomonas reinhardtii HOM05D004433 ORTHO05D005251 1.4e-43 181.8 274 40.5
Potri.006G235301 Populus trichocarpa HOM05D004433 ORTHO05D005251 5.3e-43 179.9 178 55.6
Cpa.g.sc7.222 Carica papaya HOM05D004433 ORTHO05D005251 7.9e-39 166.0 214 49.5
MCO10G003 Micromonas commoda HOM05D004433 ORTHO05D005251 1.5e-32 145.2 269 35.3
Gohir.A08G152250 Gossypium hirsutum HOM05D004433 ORTHO05D005251 1.4e-30 138.7 122 58.2
Hma1.2p1_0049F.1_g028280 Hydrangea macrophylla HOM05D004433 ORTHO05D005251 9.7e-29 132.5 113 58.4
CDE02G2445 Ceratophyllum demersum HOM05D004433 ORTHO05D005251 1.6e-26 125.2 95 66.3
PRCOL_00006247 Prasinoderma coloniale HOM05D004433 ORTHO05D005251 1.0e-25 122.5 274 33.2
VMungo1215G2735 Vigna mungo HOM05D004433 ORTHO05D005251 3.6e-23 114.0 83 61.4
RcHm_v2.0_Chr6g0271151 Rosa chinensis HOM05D004433 ORTHO05D005251 8.3e-20 102.8 71 74.6
RcHm_v2.0_Chr6g0310261 Rosa chinensis HOM05D004433 ORTHO05D005251 3.1e-19 100.9 71 73.2
Cre09.g402997 Chlamydomonas reinhardtii HOM05D004433 ORTHO05D005251 1.2e-18 99.0 162 40.1
Lj8A567T30 Lonicera japonica HOM05D004433 ORTHO05D005251 4.5e-18 97.1 56 87.5
Oeu059683.2 Olea europaea HOM05D004433 ORTHO05D005251 1.0e-17 95.9 81 54.3
Os09g0393801 Oryza sativa ssp. japonica HOM05D004433 ORTHO05D005251 1.7e-17 95.1 96 51.0
Hund19491 Selenicereus undatus HOM05D004433 ORTHO05D005251 8.5e-17 92.8 115 44.3
SGA_v2.0_scaffold266G46140 Striga asiatica HOM05D004433 ORTHO05D005251 1.5e-16 92.0 57 82.5
Os09g0393501 Oryza sativa ssp. japonica HOM05D004433 ORTHO05D005251 5.5e-16 90.1 91 50.5
Ca_28629_v3 Cicer arietinum L. HOM05D004433 ORTHO05D005251 1.8e-14 85.1 248 29.0
Sopen06g006790 Solanum pennellii HOM05D004433 ORTHO05D005251 8.8e-14 82.8 75 50.7
TAR383G0959 Trochodendron aralioides HOM05D004433 ORTHO05D005251 8.8e-14 82.8 64 65.6
HPP92_005558 Vanilla planifolia HOM05D004433 ORTHO05D005251 1.5e-13 82.0 55 72.7
Solyc06g011570.3 Solanum lycopersicum HOM05D004433 ORTHO05D005251 7.5e-13 79.7 75 48.0
AT5G38747 Arabidopsis thaliana HOM05D004433 ORTHO05D081644 8.6e-09 66.2 59 52.5


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