Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_2g08930 Fragaria vesca HOM05D002561 ORTHO05D006466 1.1e-92 343.2 165 100.0
FvH4_4g09790 Fragaria vesca HOM05D002561 ORTHO05D006466 5.0e-77 291.2 165 87.9
FvH4_4g08860 Fragaria vesca HOM05D002561 ORTHO05D006466 1.8e-63 246.1 187 70.6
FAN20G3107 Fragaria x ananassa HOM05D002561 ORTHO05D006466 1.1e-50 203.8 111 88.3
FAN15G2087 Fragaria x ananassa HOM05D002561 ORTHO05D006466 2.3e-50 202.6 111 87.4
FAN27G0984 Fragaria x ananassa HOM05D002561 ORTHO05D006466 3.1e-50 202.2 111 87.4
FvH4_2g10410 Fragaria vesca HOM05D002561 ORTHO05D006466 2.0e-49 199.5 111 86.5
RcHm_v2.0_Chr6g0267881 Rosa chinensis HOM05D002561 ORTHO05D006466 9.2e-47 190.7 111 82.9
FAN24G0448 Fragaria x ananassa HOM05D002561 ORTHO05D006466 1.1e-44 183.7 183 60.1
FAN24G1197 Fragaria x ananassa HOM05D002561 ORTHO05D006466 1.1e-44 183.7 183 60.1
FAN24G1576 Fragaria x ananassa HOM05D002561 ORTHO05D006466 1.1e-44 183.7 183 60.1
Prupe.6G177000 Prunus persica HOM05D002561 ORTHO05D006466 1.9e-39 166.4 111 73.0
MD08G1220200 Malus domestica HOM05D002561 ORTHO05D006466 2.4e-39 166.0 111 71.2
Lj8C108T5 Lonicera japonica HOM05D002561 ORTHO05D006466 4.1e-39 165.2 111 68.5
Dinv07536 Davidia involucrata HOM05D002561 ORTHO05D006466 1.2e-38 163.7 111 70.3
Prupe.1G573700 Prunus persica HOM05D002561 ORTHO05D006466 1.2e-38 163.7 111 73.9
Nn1g06426 Nelumbo nucifera HOM05D002561 ORTHO05D006466 1.6e-38 163.3 111 69.4
Actinidia11101 Actinidia chinensis HOM05D002561 ORTHO05D006466 2.7e-38 162.5 111 67.6
Solyc07g053660.3 Solanum lycopersicum HOM05D002561 ORTHO05D006466 3.5e-38 162.2 111 67.6
Sopen07g027630 Solanum pennellii HOM05D002561 ORTHO05D006466 3.5e-38 162.2 111 67.6
Dinv10164 Davidia involucrata HOM05D002561 ORTHO05D006466 4.6e-38 161.8 111 68.5
CSS0024007 Camellia sinensis var. sinensis HOM05D002561 ORTHO05D006466 1.0e-37 160.6 111 68.5
PGSC0003DMG401009395 Solanum tuberosum HOM05D002561 ORTHO05D006466 1.0e-37 160.6 111 66.7
TAR624G0407 Trochodendron aralioides HOM05D002561 ORTHO05D006466 1.3e-37 160.2 111 67.6
TAR626G1404 Trochodendron aralioides HOM05D002561 ORTHO05D006466 1.3e-37 160.2 111 67.6
CAN.G209.6 Capsicum annuum HOM05D002561 ORTHO05D006466 1.7e-37 159.8 111 65.8
CiPaw.03G181000 Carya illinoinensis HOM05D002561 ORTHO05D006466 1.7e-37 159.8 111 71.2
FAN24G2704 Fragaria x ananassa HOM05D002561 ORTHO05D006466 3.0e-37 159.1 94 83.0
PSO832G1390 Papaver somniferum HOM05D002561 ORTHO05D006466 3.0e-37 159.1 156 53.2
GSVIVG01020601001 Vitis vinifera HOM05D002561 ORTHO05D006466 3.9e-37 158.7 111 68.5
Actinidia11004 Actinidia chinensis HOM05D002561 ORTHO05D006466 5.1e-37 158.3 111 66.7
Cfa014656 Carpinus fangiana HOM05D002561 ORTHO05D006466 5.1e-37 158.3 111 67.6
Haze_13235 Corylus avellana HOM05D002561 ORTHO05D006466 5.1e-37 158.3 111 67.6
Haze_13238 Corylus avellana HOM05D002561 ORTHO05D006466 5.1e-37 158.3 111 67.6
MBI07_g29117_MAGBIO Magnolia biondii HOM05D002561 ORTHO05D006466 5.1e-37 158.3 111 67.6
Rhsim06G0138000 Rhododendron simsii HOM05D002561 ORTHO05D006466 5.1e-37 158.3 111 66.7
MSTRG.15131 Avicennia marina HOM05D002561 ORTHO05D006466 6.6e-37 157.9 111 68.5
Peaxi162Scf00845g00022 Petunia axillaris HOM05D002561 ORTHO05D006466 8.6e-37 157.5 111 67.6
PSO210G7210 Papaver somniferum HOM05D002561 ORTHO05D006466 1.1e-36 157.1 156 52.6
Cc05_g07670 Coffea canephora HOM05D002561 ORTHO05D006466 2.5e-36 156.0 111 66.7
ECA240G2497 Erigeron canadensis HOM05D002561 ORTHO05D006466 7.3e-36 154.5 111 64.9
HanXRQChr05g0140561 Helianthus annuus HOM05D002561 ORTHO05D006466 1.2e-35 153.7 111 64.9
vmacro12361 Vaccinium macrocarpon HOM05D002561 ORTHO05D006466 1.6e-35 153.3 111 64.9
Cpa.g.sc83.89 Carica papaya HOM05D002561 ORTHO05D006466 2.1e-35 152.9 111 64.9
Nitab4.5_0000621g0150 Nicotiana tabacum HOM05D002561 ORTHO05D006466 2.1e-35 152.9 111 63.1
Atru.chr6.2875 Acer truncatum HOM05D002561 ORTHO05D006466 2.8e-35 152.5 111 65.8
PSO782G0979 Papaver somniferum HOM05D002561 ORTHO05D006466 2.8e-35 152.5 158 52.5
Ciclev10015209m.g Citrus clementina HOM05D002561 ORTHO05D006466 3.6e-35 152.1 111 64.9
Migut.D00238 Erythranthe guttata HOM05D002561 ORTHO05D006466 4.7e-35 151.8 111 67.6
CsaV3_7G003080 Cucumis sativus L. HOM05D002561 ORTHO05D006466 8.1e-35 151.0 111 64.0
ClCG02G002370 Citrullus lanatus HOM05D002561 ORTHO05D006466 1.4e-34 150.2 111 64.0
Manes.13G142500 Manihot esculenta HOM05D002561 ORTHO05D006466 1.8e-34 149.8 111 63.1
CANSAT64G1696 Cannabis sativa HOM05D002561 ORTHO05D006466 4.0e-34 148.7 111 63.1
Eucgr.K01052 Eucalyptus grandis HOM05D002561 ORTHO05D006466 4.0e-34 148.7 111 65.8
SGA_v2.0_scaffold70G23496 Striga asiatica HOM05D002561 ORTHO05D006466 4.0e-34 148.7 111 64.0
Duzib052G0349 Durio zibethinus HOM05D002561 ORTHO05D006466 5.2e-34 148.3 111 64.9
Gorai.005G199500 Gossypium raimondii HOM05D002561 ORTHO05D006466 6.9e-34 147.9 111 62.2
MELO3C018869.2 Cucumis melo HOM05D002561 ORTHO05D006466 8.9e-34 147.5 111 63.1
Thhalv10025176m.g Eutrema salsugineum HOM05D002561 ORTHO05D006466 8.9e-34 147.5 111 62.2
Nitab4.5_0004546g0040 Nicotiana tabacum HOM05D002561 ORTHO05D006466 8.9e-34 147.5 111 64.0
Thecc.02G185400 Theobroma cacao HOM05D002561 ORTHO05D006466 1.5e-33 146.7 111 64.0
AL7G24110 Arabidopsis lyrata HOM05D002561 ORTHO05D006466 2.0e-33 146.4 156 50.0
CDE04G0034 Ceratophyllum demersum HOM05D002561 ORTHO05D006466 2.0e-33 146.4 111 62.2
THA.LOC104804051 Tarenaya hassleriana HOM05D002561 ORTHO05D006466 2.0e-33 146.4 111 64.9
Gohir.A03G154700 Gossypium hirsutum HOM05D002561 ORTHO05D006466 2.6e-33 146.0 111 63.1
PGR142G4043 Punica granatum HOM05D002561 ORTHO05D006466 2.6e-33 146.0 112 63.4
Ah.03g138410 Amaranthus hybridus HOM05D002561 ORTHO05D006466 4.4e-33 145.2 111 63.1
Glyma.02G251700 Glycine max HOM05D002561 ORTHO05D006466 4.4e-33 145.2 111 58.6
Aqoxy4G00646 Aquilegia oxysepala HOM05D002561 ORTHO05D006466 5.8e-33 144.8 154 51.9
Lsat_1_v5_gn_4_64440 Lactuca sativa HOM05D002561 ORTHO05D006466 5.8e-33 144.8 111 63.1
Sed0023046 Sechium edule HOM05D002561 ORTHO05D006466 5.8e-33 144.8 111 61.3
CDE03G0236 Ceratophyllum demersum HOM05D002561 ORTHO05D006466 7.6e-33 144.4 111 62.2
COL.COLO4_28034 Corchorus olitorius HOM05D002561 ORTHO05D006466 7.6e-33 144.4 111 62.2
Gohir.D02G177700 Gossypium hirsutum HOM05D002561 ORTHO05D006466 7.6e-33 144.4 111 61.3
ATR0665G052 Amborella trichopoda HOM05D002561 ORTHO05D006466 9.9e-33 144.1 111 62.2
Carub.0007s1225 Capsella rubella HOM05D002561 ORTHO05D006466 9.9e-33 144.1 156 50.0
Hma1.2p1_0002F.1_g002200 Hydrangea macrophylla HOM05D002561 ORTHO05D006466 9.9e-33 144.1 111 61.3
Lj3g0012051 Lotus japonicus HOM05D002561 ORTHO05D006466 9.9e-33 144.1 156 51.3
Aa31LG2G21970 Aethionema arabicum HOM05D002561 ORTHO05D006466 1.3e-32 143.7 111 61.3
AT4G28450 Arabidopsis thaliana HOM05D002561 ORTHO05D006466 2.2e-32 142.9 156 48.7
Sc24g0000990 Simmondsia chinensis HOM05D002561 ORTHO05D006466 2.2e-32 142.9 111 60.4
Phvul.006G037700 Phaseolus vulgaris HOM05D002561 ORTHO05D006466 3.8e-32 142.1 111 62.2
Potri.017G014700 Populus trichocarpa HOM05D002561 ORTHO05D006466 6.4e-32 141.4 111 62.2
EL10Ac9g20811 Beta vulgaris HOM05D002561 ORTHO05D006466 8.4e-32 141.0 111 61.3
Potri.007G137300 Populus trichocarpa HOM05D002561 ORTHO05D006466 8.4e-32 141.0 111 62.2
arahy.Tifrunner.gnm1.ann1.TSZ6TX Arachis hypogaea HOM05D002561 ORTHO05D006466 1.1e-31 140.6 111 63.1
arahy.Tifrunner.gnm1.ann1.UE4GYS Arachis hypogaea HOM05D002561 ORTHO05D006466 1.1e-31 140.6 111 63.1
Ca_13381_v3 Cicer arietinum L. HOM05D002561 ORTHO05D006466 1.9e-31 139.8 111 58.6
Ca_30047_v3 Cicer arietinum L. HOM05D002561 ORTHO05D006466 1.9e-31 139.8 111 58.6
Hund07915 Selenicereus undatus HOM05D002561 ORTHO05D006466 3.2e-31 139.0 111 60.4
Sabra17G0011900 Salix brachista HOM05D002561 ORTHO05D006466 4.2e-31 138.7 111 63.1
Medtr1g022960 Medicago truncatula HOM05D002561 ORTHO05D006466 7.1e-31 137.9 111 59.5
unitig_85.g27364 Utricularia gibba HOM05D002561 ORTHO05D006466 9.3e-31 137.5 111 59.5
Sp7g26430 Schrenkiella parvula HOM05D002561 ORTHO05D006466 1.2e-30 137.1 156 48.7
BcaC06g32621 Brassica carinata HOM05D002561 ORTHO05D006466 2.7e-30 136.0 156 48.1
CARHR236220 Cardamine hirsuta HOM05D002561 ORTHO05D006466 7.8e-30 134.4 156 48.1
C07p56220 Brassica napus HOM05D002561 ORTHO05D006466 3.0e-29 132.5 157 48.4
Os01g0238900 Oryza sativa ssp. japonica HOM05D002561 ORTHO05D006466 3.0e-29 132.5 111 56.8
Psat6g009760 Pisum sativum HOM05D002561 ORTHO05D006466 3.0e-29 132.5 111 57.7
BolC7t46099H Brassica oleracea HOM05D002561 ORTHO05D006466 3.9e-29 132.1 157 47.8
TPR.G22970 Trifolium pratense HOM05D002561 ORTHO05D006466 5.1e-29 131.7 111 58.6
TWI14G0319 Tripterygium wilfordii HOM05D002561 ORTHO05D006466 5.1e-29 131.7 111 58.6
Zm00001eb064830 Zea mays HOM05D002561 ORTHO05D006466 6.6e-29 131.3 111 55.0
A03p58100 Brassica napus HOM05D002561 ORTHO05D006466 1.9e-28 129.8 157 47.8
BraA03t14876Z Brassica rapa HOM05D002561 ORTHO05D006466 1.9e-28 129.8 157 47.8
DCAR_013032 Daucus carota HOM05D002561 ORTHO05D006466 1.9e-28 129.8 112 54.5
TWI59G1106 Tripterygium wilfordii HOM05D002561 ORTHO05D006466 1.9e-28 129.8 111 58.6
AUR62025466 Chenopodium quinoa HOM05D002561 ORTHO05D006466 3.3e-28 129.0 111 55.9
HPP92_000278 Vanilla planifolia HOM05D002561 ORTHO05D006466 1.3e-27 127.1 111 54.1
Lalb_Chr25g0280621 Lupinus albus HOM05D002561 ORTHO05D006466 2.8e-27 125.9 111 54.1
AUR62008772 Chenopodium quinoa HOM05D002561 ORTHO05D006466 1.1e-26 124.0 111 54.1
QL08p040074 Quercus lobata HOM05D002561 ORTHO05D006466 1.1e-26 124.0 111 55.9
TPR.G30494 Trifolium pratense HOM05D002561 ORTHO05D006466 3.4e-25 119.0 121 49.6
Pp3c9_6000 Physcomitrium patens HOM05D002561 ORTHO05D006466 3.8e-24 115.5 116 50.9
AagrBONN_evm.TU.Sc2ySwM_117.187 Anthoceros agrestis HOM05D002561 ORTHO05D006466 3.2e-23 112.5 111 50.5
Sabra07G0110300 Salix brachista HOM05D002292 ORTHO05D003256 2.7e-22 109.4 146 46.6
Mapoly0143s0027 Marchantia polymorpha HOM05D002561 ORTHO05D006466 3.0e-21 105.9 111 48.6
SMO347G0106 Selaginella moellendorffii HOM05D002561 ORTHO05D006466 5.1e-21 105.1 111 45.0
CBR_g34460 Chara braunii HOM05D002561 ORTHO05D006466 1.5e-17 93.6 117 40.2
MD15G1410600 Malus domestica HOM05D002561 ORTHO05D006466 1.5e-17 93.6 69 71.0
Cre07.g318702 Chlamydomonas reinhardtii HOM05D002561 ORTHO05D006466 3.9e-13 79.0 110 34.5
MCO01G363 Micromonas commoda HOM05D002561 ORTHO05D006466 3.7e-11 72.4 85 41.2
MBI07_g29113_MAGBIO Magnolia biondii HOM05D000113 ORTHO05D003010 1.2e-06 57.4 41 61.0
FvH4_4g08600 Fragaria vesca HOM05D000107 ORTHO05D006466 4.6e-06 55.5 25 100.0


User provided reference genes

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