Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g30430 Fragaria vesca HOM05D004447 ORTHO05D029546 4.7e-78 294.7 143 100.0
FAN01G0266 Fragaria x ananassa HOM05D004447 ORTHO05D005973 4.9e-27 125.2 65 89.2
FAN03G1122 Fragaria x ananassa HOM05D004447 ORTHO05D005973 4.9e-27 125.2 65 89.2
FvH4_7g17041 Fragaria vesca HOM05D004447 ORTHO05D005973 5.4e-26 121.7 64 87.5
FAN06G1152 Fragaria x ananassa HOM05D004447 ORTHO05D005973 5.4e-26 121.7 64 87.5
RcHm_v2.0_Chr3g0490671 Rosa chinensis HOM05D004447 ORTHO05D005973 1.6e-25 120.2 64 87.5
Prupe.4G246200 Prunus persica HOM05D004447 ORTHO05D005973 8.7e-24 114.4 65 80.0
MD03G1176600 Malus domestica HOM05D004447 ORTHO05D005973 3.3e-23 112.5 66 80.3
Prupe.5G048200 Prunus persica HOM05D004447 ORTHO05D005973 2.8e-22 109.4 65 76.9
Psat7g024280 Pisum sativum HOM05D004447 ORTHO05D005973 8.1e-22 107.8 66 74.2
FAN19G2197 Fragaria x ananassa HOM05D004447 ORTHO05D029546 1.1e-21 107.5 47 100.0
Rhsim01G0191400 Rhododendron simsii HOM05D004447 ORTHO05D005973 1.1e-21 107.5 65 75.4
Hma1.2p1_0571F.1_g180890 Hydrangea macrophylla HOM05D004447 ORTHO05D005973 1.4e-21 107.1 66 75.8
Hma1.2p1_0571F.1_g180900 Hydrangea macrophylla HOM05D004447 ORTHO05D005973 1.4e-21 107.1 66 75.8
QL01p004967 Quercus lobata HOM05D004447 ORTHO05D005973 1.4e-21 107.1 65 73.8
Actinidia06336 Actinidia chinensis HOM05D004447 ORTHO05D005973 2.4e-21 106.3 66 74.2
Nn8g41218 Nelumbo nucifera HOM05D004447 ORTHO05D005973 3.1e-21 105.9 66 72.7
vmacro17434 Vaccinium macrocarpon HOM05D004447 ORTHO05D005973 3.1e-21 105.9 65 73.8
Manes.14G002000 Manihot esculenta HOM05D004447 ORTHO05D005973 4.0e-21 105.5 66 72.7
Cfa009762 Carpinus fangiana HOM05D004447 ORTHO05D005973 5.3e-21 105.1 66 74.2
EL10Ac4g10265 Beta vulgaris HOM05D004447 ORTHO05D005973 6.9e-21 104.8 66 71.2
EL10Ac4g10281 Beta vulgaris HOM05D004447 ORTHO05D005973 6.9e-21 104.8 66 71.2
Lj2C632T3 Lonicera japonica HOM05D004447 ORTHO05D005973 6.9e-21 104.8 66 69.7
CSS0002798 Camellia sinensis var. sinensis HOM05D004447 ORTHO05D005973 9.0e-21 104.4 66 71.2
CSS0013975 Camellia sinensis var. sinensis HOM05D004447 ORTHO05D005973 9.0e-21 104.4 66 71.2
Thecc.09G232100 Theobroma cacao HOM05D004447 ORTHO05D005973 9.0e-21 104.4 66 74.2
VMungo1080G0814 Vigna mungo HOM05D004447 ORTHO05D005973 9.0e-21 104.4 66 72.7
Atru.chr3.2739 Acer truncatum HOM05D004447 ORTHO05D005973 1.2e-20 104.0 66 72.7
COL.COLO4_24890 Corchorus olitorius HOM05D004447 ORTHO05D005973 1.2e-20 104.0 66 74.2
Glyma.13G340100 Glycine max HOM05D004447 ORTHO05D005973 1.5e-20 103.6 66 72.7
Potri.009G054300 Populus trichocarpa HOM05D004447 ORTHO05D005973 1.5e-20 103.6 66 69.7
Aqoxy5G02409 Aquilegia oxysepala HOM05D004447 ORTHO05D005973 2.0e-20 103.2 66 69.7
Cpa.g.sc84.65 Carica papaya HOM05D004447 ORTHO05D005973 2.6e-20 102.8 66 69.7
Ca_17467_v3 Cicer arietinum L. HOM05D004447 ORTHO05D005973 3.4e-20 102.4 66 72.7
TPR.G3376 Trifolium pratense HOM05D004447 ORTHO05D005973 3.4e-20 102.4 66 72.7
vmacro12587 Vaccinium macrocarpon HOM05D004447 ORTHO05D005973 3.4e-20 102.4 65 70.8
Eucgr.J00777 Eucalyptus grandis HOM05D004447 ORTHO05D005973 4.5e-20 102.1 65 75.4
arahy.Tifrunner.gnm1.ann1.1VP9U3 Arachis hypogaea HOM05D004447 ORTHO05D005973 5.8e-20 101.7 66 69.7
arahy.Tifrunner.gnm1.ann1.M4FG4U Arachis hypogaea HOM05D004447 ORTHO05D005973 5.8e-20 101.7 66 69.7
Dinv22185 Davidia involucrata HOM05D004447 ORTHO05D005973 5.8e-20 101.7 66 69.7
FAN23G0013 Fragaria x ananassa HOM05D004447 ORTHO05D029546 5.8e-20 101.7 47 93.6
Glyma.15G034300 Glycine max HOM05D004447 ORTHO05D005973 5.8e-20 101.7 66 71.2
Oeu043298.1 Olea europaea HOM05D004447 ORTHO05D005973 5.8e-20 101.7 66 71.2
Phvul.L009243 Phaseolus vulgaris HOM05D004447 ORTHO05D005973 5.8e-20 101.7 66 71.2
Hund07518 Selenicereus undatus HOM05D004447 ORTHO05D005973 5.8e-20 101.7 64 70.3
CAN.G289.50 Capsicum annuum HOM05D004447 ORTHO05D005973 7.6e-20 101.3 66 68.2
TAR636G2291 Trochodendron aralioides HOM05D004447 ORTHO05D005973 7.6e-20 101.3 66 69.7
Nitab4.5_0000023g0270 Nicotiana tabacum HOM05D004447 ORTHO05D005973 1.0e-19 100.9 66 66.7
Nitab4.5_0005731g0030 Nicotiana tabacum HOM05D004447 ORTHO05D005973 1.0e-19 100.9 66 66.7
Sabra09G0039600 Salix brachista HOM05D004447 ORTHO05D005973 1.0e-19 100.9 66 68.2
Haze_23126 Corylus avellana HOM05D004447 ORTHO05D005973 1.7e-19 100.1 67 73.1
Medtr8g099640 Medicago truncatula HOM05D004447 ORTHO05D005973 1.7e-19 100.1 66 71.2
Duzib170G0888 Durio zibethinus HOM05D004447 ORTHO05D005973 2.2e-19 99.8 66 69.7
Lj3g0019316 Lotus japonicus HOM05D004447 ORTHO05D005973 2.2e-19 99.8 66 68.2
Peaxi162Scf00862g00001 Petunia axillaris HOM05D004447 ORTHO05D005973 2.2e-19 99.8 66 68.2
Sc16g0011520 Simmondsia chinensis HOM05D004447 ORTHO05D005973 2.9e-19 99.4 64 68.8
Ciclev10014192m.g Citrus clementina HOM05D004447 ORTHO05D005973 3.8e-19 99.0 65 67.7
Solyc03g006420.4 Solanum lycopersicum HOM05D004447 ORTHO05D005973 3.8e-19 99.0 66 65.2
Sopen03g002430 Solanum pennellii HOM05D004447 ORTHO05D005973 3.8e-19 99.0 66 65.2
PGSC0003DMG401012812 Solanum tuberosum HOM05D004447 ORTHO05D005973 3.8e-19 99.0 66 63.6
Gorai.004G019600 Gossypium raimondii HOM05D004447 ORTHO05D005973 4.9e-19 98.6 66 69.7
AUR62000111 Chenopodium quinoa HOM05D004447 ORTHO05D005973 6.5e-19 98.2 66 66.7
AUR62019289 Chenopodium quinoa HOM05D004447 ORTHO05D005973 6.5e-19 98.2 66 66.7
MSTRG.21381 Avicennia marina HOM05D004447 ORTHO05D005973 8.4e-19 97.8 65 67.7
BcaC04g21255 Brassica carinata HOM05D004447 ORTHO05D005973 1.1e-18 97.4 66 63.6
C09p33790 Brassica napus HOM05D004447 ORTHO05D005973 1.1e-18 97.4 66 63.6
BolC9t56215H Brassica oleracea HOM05D004447 ORTHO05D005973 1.1e-18 97.4 66 63.6
CiPaw.13G161800 Carya illinoinensis HOM05D004447 ORTHO05D005973 1.1e-18 97.4 66 69.7
ClCG08G000100 Citrullus lanatus HOM05D004447 ORTHO05D005973 1.1e-18 97.4 64 67.2
Sed0019583 Sechium edule HOM05D004447 ORTHO05D005973 1.1e-18 97.4 64 67.2
DCAR_031545 Daucus carota HOM05D004447 ORTHO05D005973 1.4e-18 97.1 65 67.7
CANSAT54G1530 Cannabis sativa HOM05D004447 ORTHO05D005973 1.9e-18 96.7 66 68.2
THA.LOC104799099 Tarenaya hassleriana HOM05D004447 ORTHO05D005973 1.9e-18 96.7 66 65.2
HanXRQChr07g0197501 Helianthus annuus HOM05D004447 ORTHO05D005973 2.5e-18 96.3 66 65.2
Gohir.D08G024200 Gossypium hirsutum HOM05D004447 ORTHO05D005973 3.2e-18 95.9 66 68.2
MBI01_g18890_MAGBIO Magnolia biondii HOM05D004447 ORTHO05D005973 3.2e-18 95.9 65 64.6
Gohir.A08G013660 Gossypium hirsutum HOM05D004447 ORTHO05D005973 4.2e-18 95.5 66 68.2
Carub.0006s3195 Capsella rubella HOM05D004447 ORTHO05D005973 5.5e-18 95.1 66 65.2
CsaV3_3G030760 Cucumis sativus L. HOM05D004447 ORTHO05D005973 5.5e-18 95.1 64 65.6
A09p26680 Brassica napus HOM05D004447 ORTHO05D005973 7.1e-18 94.7 65 63.1
BraA09t38238Z Brassica rapa HOM05D004447 ORTHO05D005973 7.1e-18 94.7 65 63.1
Psat0s3676g0040 Pisum sativum HOM05D004447 ORTHO05D018696 7.1e-18 94.7 66 65.2
Lalb_Chr24g0397081 Lupinus albus HOM05D004447 ORTHO05D005973 9.3e-18 94.4 66 66.7
Sp6g04850 Schrenkiella parvula HOM05D004447 ORTHO05D005973 9.3e-18 94.4 66 63.6
GSVIVG01025279001 Vitis vinifera HOM05D004447 ORTHO05D005973 1.2e-17 94.0 65 66.2
Cc02_g33870 Coffea canephora HOM05D004447 ORTHO05D005973 1.6e-17 93.6 66 62.1
MELO3C007066.2 Cucumis melo HOM05D004447 ORTHO05D005973 1.6e-17 93.6 64 64.1
Migut.D00596 Erythranthe guttata HOM05D004447 ORTHO05D005973 1.6e-17 93.6 64 67.2
Lsat_1_v5_gn_2_97601 Lactuca sativa HOM05D004447 ORTHO05D005973 1.6e-17 93.6 64 67.2
AL6G47620 Arabidopsis lyrata HOM05D004447 ORTHO05D005973 2.1e-17 93.2 66 63.6
PGR119G1865 Punica granatum HOM05D004447 ORTHO05D005973 2.1e-17 93.2 65 66.2
TWI32G0348 Tripterygium wilfordii HOM05D004447 ORTHO05D005973 2.1e-17 93.2 66 66.7
unitig_0.g298 Utricularia gibba HOM05D004447 ORTHO05D005973 2.1e-17 93.2 66 63.6
BcaB01g01767 Brassica carinata HOM05D004447 ORTHO05D005973 2.7e-17 92.8 65 61.5
CARHR253540 Cardamine hirsuta HOM05D004447 ORTHO05D005973 6.0e-17 91.7 65 63.1
CsaV3_6G052450 Cucumis sativus L. HOM05D004447 ORTHO05D005973 6.0e-17 91.7 84 52.4
ECA238G3100 Erigeron canadensis HOM05D004447 ORTHO05D005973 6.0e-17 91.7 65 64.6
SGA_v2.0_scaffold247G44874 Striga asiatica HOM05D004447 ORTHO05D005973 6.0e-17 91.7 65 64.6
GSVIVG01025457001 Vitis vinifera HOM05D004447 ORTHO05D005973 6.0e-17 91.7 95 48.4
ATR0605G286 Amborella trichopoda HOM05D004447 ORTHO05D005973 7.9e-17 91.3 66 59.1
CDE05G2287 Ceratophyllum demersum HOM05D004447 ORTHO05D005973 7.9e-17 91.3 76 56.6
Zm00001eb278360 Zea mays HOM05D004447 ORTHO05D005973 1.0e-16 90.9 65 63.1
AT4G12620 Arabidopsis thaliana HOM05D004447 ORTHO05D005973 1.3e-16 90.5 66 63.6
Thhalv10029404m.g Eutrema salsugineum HOM05D004447 ORTHO05D005973 1.3e-16 90.5 65 63.1
HPP92_009576 Vanilla planifolia HOM05D004447 ORTHO05D005973 1.8e-16 90.1 65 58.5
AT4G14700 Arabidopsis thaliana HOM05D004447 ORTHO05D005973 2.3e-16 89.7 65 63.1
PSO170G1822 Papaver somniferum HOM05D004447 ORTHO05D005973 2.3e-16 89.7 66 68.2
PSO302G0234 Papaver somniferum HOM05D004447 ORTHO05D005973 2.3e-16 89.7 66 68.2
SHI27486 Sapria himalayana HOM05D004447 ORTHO05D005973 3.0e-16 89.4 66 60.6
Zm00001eb374440 Zea mays HOM05D004447 ORTHO05D005973 3.9e-16 89.0 65 61.5
PSO455G0096 Papaver somniferum HOM05D004447 ORTHO05D005973 1.1e-15 87.4 65 67.7
Aa31LG9G10020 Aethionema arabicum HOM05D004447 ORTHO05D005973 1.5e-15 87.0 63 61.9
Nn2g15473 Nelumbo nucifera HOM05D004447 ORTHO05D029546 5.7e-15 85.1 48 75.0
Ah.01g003390 Amaranthus hybridus HOM05D004447 ORTHO05D005973 4.8e-14 82.0 48 72.9
SMO145G0037 Selaginella moellendorffii HOM05D004447 ORTHO05D005973 6.5e-11 71.6 64 46.9
Mapoly0041s0101 Marchantia polymorpha HOM05D004447 ORTHO05D005973 1.8e-08 63.5 59 50.8
Pp3c9_1080 Physcomitrium patens HOM05D004447 ORTHO05D005973 1.5e-07 60.5 67 49.3
SalBow6G4490 Salvia bowleyana HOM05D004447 ORTHO05D005973 2.5e-07 59.7 82 43.9
SalBow8G0323 Salvia bowleyana HOM05D004447 ORTHO05D005973 1.6e-06 57.0 46 58.7


User provided reference genes

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