Gene: Pp3c9_1080

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c9_1080
  • Transcript Identifier Pp3c9_1080V3.2
  • Gene Type Coding gene
  • Location Chr09 : 611199-617550 : negative

Gene Family Information

  • ID HOM05D004447
  • #Genes/#Species 161/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c9_1080V3.2
  • pacid 32911967
  • alias Phypa_131736
  • alias Phpat.009G004200
  • alias Pp1s90_96V6
  • uniprot A0A2K1K1H4

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT4G14700
GO:0009567
ISO
PLAZA Integrative Orthologydouble fertilization forming a zygote and endosperm AT4G12620
GO:0033314
IBA
GOA Databasemitotic DNA replication checkpoint signaling
GO:0006270
IBA
GOA DatabaseDNA replication initiation
GO:0006260
IEA
GOA DatabaseDNA replication

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003682
IEA
GOA Databasechromatin binding
GO:0003682
IEA
InterProchromatin binding
GO:0042393
ISO
PLAZA Integrative Orthologyhistone binding AT4G12620
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G14700
GO:0010385
ISO
PLAZA Integrative Orthologydouble-stranded methylated DNA binding AT4G14700
GO:0003688
IBA
GOA DatabaseDNA replication origin binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016887
IEA
InterProATP hydrolysis activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005664
IBA
GOA Databasenuclear origin of replication recognition complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020793 Origin recognition complex, subunit 1
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001025 Bromo adjacent homology (BAH) domain
IPR019787 Zinc finger, PHD-finger
IPR043151 Bromo adjacent homology (BAH) domain superfamily
IPR041083 AAA lid domain
IPR003593 AAA+ ATPase domain
IPR001965 Zinc finger, PHD-type
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003959 ATPase, AAA-type, core
IPR011011 Zinc finger, FYVE/PHD-type
Mapman id Description
13.2.1.1.1 Cell cycle organisation.DNA replication.preinitiation.origin recognition complex.component ORC1