Gene: Ah.01g003390

General Information

Structural Information

  • Species Amaranthus hybridus
  • Gene Identifier Ah.01g003390
  • Transcript Identifier Ah.01g003390-v1.1.a1
  • Gene Type Coding gene
  • Location AmaHy_arrow1_Scaffold_1 : 2301546-2312955 : positive

Gene Family Information

  • ID HOM05D004447
  • #Genes/#Species 161/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Ah.01g003390-v1.1.a1

Descriptions

  • Description Origin of replication complex subunit 1A (AtORC1a) (Origin recognition complex subunit 1a)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009567
ISO
PLAZA Integrative Orthologydouble fertilization forming a zygote and endosperm AT4G12620
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT4G14700

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0010385
ISO
PLAZA Integrative Orthologydouble-stranded methylated DNA binding AT4G14700
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G14700
GO:0042393
ISO
PLAZA Integrative Orthologyhistone binding AT4G12620
GO:0003682
ISO
PLAZA Homology (enrichment)chromatin binding HOM05D004447

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR041083 AAA lid domain
IPR020793 Origin recognition complex, subunit 1
IPR035979 RNA-binding domain superfamily
IPR043151 Bromo adjacent homology (BAH) domain superfamily
IPR000504 RNA recognition motif domain
IPR003593 AAA+ ATPase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003959 ATPase, AAA-type, core
Mapman id Description
13.2.1.1.1 Cell cycle organisation.DNA replication.preinitiation.origin recognition complex.component ORC1