Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G1664 Fragaria x ananassa HOM05D005614 ORTHO05D006759 4.2e-181 637.9 316 100.0
FAN15G2492 Fragaria x ananassa HOM05D005614 ORTHO05D006759 2.8e-177 625.2 316 98.1
FvH4_2g26720 Fragaria vesca HOM05D005614 ORTHO05D006759 6.1e-156 554.3 319 90.0
RcHm_v2.0_Chr6g0295621 Rosa chinensis HOM05D005614 ORTHO05D006759 3.7e-145 518.5 316 84.5
FAN20G0890 Fragaria x ananassa HOM05D005614 ORTHO05D006759 2.0e-138 496.1 294 85.7
Prupe.1G500100 Prunus persica HOM05D005614 ORTHO05D006759 2.7e-135 485.7 316 79.4
MD15G1351400 Malus domestica HOM05D005614 ORTHO05D006759 1.2e-132 476.9 317 78.5
FAN24G3468 Fragaria x ananassa HOM05D005614 ORTHO05D006759 6.1e-132 474.6 433 64.0
PGR042G1492 Punica granatum HOM05D005614 ORTHO05D006759 6.6e-126 454.5 315 73.3
QL09p035347 Quercus lobata HOM05D005614 ORTHO05D006759 1.9e-125 453.0 319 73.7
CANSAT54G1242 Cannabis sativa HOM05D005614 ORTHO05D006759 5.5e-125 451.4 318 73.0
CiPaw.05G223000 Carya illinoinensis HOM05D005614 ORTHO05D006759 4.0e-123 445.3 308 74.0
GSVIVG01008884001 Vitis vinifera HOM05D005614 ORTHO05D006759 3.4e-122 442.2 317 72.6
Sed0025863 Sechium edule HOM05D005614 ORTHO05D006759 7.5e-122 441.0 316 71.8
Thecc.08G123600 Theobroma cacao HOM05D005614 ORTHO05D006759 9.8e-122 440.7 316 72.5
Gohir.A05G234600 Gossypium hirsutum HOM05D005614 ORTHO05D006759 1.6e-119 433.3 316 70.9
Potri.005G176600 Populus trichocarpa HOM05D005614 ORTHO05D006759 3.5e-119 432.2 318 71.1
TWI79G0333 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 5.9e-119 431.4 319 72.7
Gorai.009G245300 Gossypium raimondii HOM05D005614 ORTHO05D006759 5.0e-118 428.3 316 70.3
CsaV3_2G009350 Cucumis sativus L. HOM05D005614 ORTHO05D006759 6.6e-118 427.9 294 74.1
ClCG08G005590 Citrullus lanatus HOM05D005614 ORTHO05D006759 2.1e-116 422.9 353 64.9
Ciclev10002002m.g Citrus clementina HOM05D005614 ORTHO05D006759 1.8e-115 419.9 318 68.6
Lj1g0021555 Lotus japonicus HOM05D005614 ORTHO05D006759 2.3e-115 419.5 315 69.2
Sed0022578 Sechium edule HOM05D005614 ORTHO05D006759 6.8e-115 417.9 328 67.4
Ca_15193_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 1.2e-114 417.2 315 68.3
Atru.chr13.1437_Atru.chr13.1438 Acer truncatum HOM05D005614 ORTHO05D006759 2.0e-114 416.4 316 68.0
Cpa.g.sc36.54 Carica papaya HOM05D005614 ORTHO05D006759 2.6e-114 416.0 316 68.7
TAR628G1424 Trochodendron aralioides HOM05D005614 ORTHO05D006759 4.4e-114 415.2 320 68.1
Dinv07241 Davidia involucrata HOM05D005614 ORTHO05D006759 5.8e-114 414.8 321 69.8
THA.LOC104806819 Tarenaya hassleriana HOM05D005614 ORTHO05D006759 3.7e-113 412.1 319 66.8
Phvul.009G124300 Phaseolus vulgaris HOM05D005614 ORTHO05D006759 6.4e-113 411.4 313 66.5
Glyma.04G250400 Glycine max HOM05D005614 ORTHO05D006759 8.3e-113 411.0 315 67.3
Medtr3g072430 Medicago truncatula HOM05D005614 ORTHO05D006759 1.4e-112 410.2 313 68.1
PSO782G2082 Papaver somniferum HOM05D005614 ORTHO05D006759 2.4e-112 409.5 320 67.5
HanXRQChr02g0053121 Helianthus annuus HOM05D005614 ORTHO05D006759 3.2e-112 409.1 315 67.6
PSO170G2981 Papaver somniferum HOM05D005614 ORTHO05D006759 4.1e-112 408.7 320 66.9
Actinidia03480 Actinidia chinensis HOM05D005614 ORTHO05D006759 1.2e-111 407.1 319 68.0
Lalb_Chr23g0270981 Lupinus albus HOM05D005614 ORTHO05D006759 1.2e-111 407.1 316 66.8
Glyma.06G112400 Glycine max HOM05D005614 ORTHO05D006759 1.6e-111 406.8 315 67.0
Sp1g16310 Schrenkiella parvula HOM05D005614 ORTHO05D006759 2.0e-111 406.4 320 66.6
HanXRQChr16g0532671 Helianthus annuus HOM05D005614 ORTHO05D006759 1.0e-110 404.1 315 67.3
Thhalv10008316m.g Eutrema salsugineum HOM05D005614 ORTHO05D006759 1.3e-110 403.7 320 66.9
Migut.D01926 Erythranthe guttata HOM05D005614 ORTHO05D006759 2.3e-110 402.9 319 67.1
Sc01g0001200 Simmondsia chinensis HOM05D005614 ORTHO05D006759 3.9e-110 402.1 331 64.0
CARHR138110 Cardamine hirsuta HOM05D005614 ORTHO05D006759 5.0e-110 401.7 319 65.8
BcaB07g31845 Brassica carinata HOM05D005614 ORTHO05D006759 6.6e-110 401.4 320 65.6
Aqoxy7G02121 Aquilegia oxysepala HOM05D005614 ORTHO05D006759 2.5e-109 399.4 322 67.1
CSS0036035 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 2.5e-109 399.4 319 66.5
RhsimUnG0093400 Rhododendron simsii HOM05D005614 ORTHO05D006759 2.5e-109 399.4 320 67.2
C05p16610 Brassica napus HOM05D005614 ORTHO05D006759 1.2e-108 397.1 319 64.6
Carub.0001s1797 Capsella rubella HOM05D005614 ORTHO05D006759 1.2e-108 397.1 321 65.1
AT1G18340 Arabidopsis thaliana HOM05D005614 ORTHO05D006759 1.6e-108 396.7 319 65.5
A06p14370 Brassica napus HOM05D005614 ORTHO05D006759 1.6e-108 396.7 320 65.0
AL1G30720 Arabidopsis lyrata HOM05D005614 ORTHO05D006759 2.1e-108 396.4 319 66.1
ECA246G0276 Erigeron canadensis HOM05D005614 ORTHO05D006759 2.1e-108 396.4 317 66.9
Aa31LG6G9300 Aethionema arabicum HOM05D005614 ORTHO05D006759 2.8e-108 396.0 317 65.3
BraA06t24565Z Brassica rapa HOM05D005614 ORTHO05D006759 3.6e-108 395.6 320 64.7
arahy.Tifrunner.gnm1.ann1.2VS3GS Arachis hypogaea HOM05D005614 ORTHO05D006759 4.7e-108 395.2 309 67.3
BolC5t30360H Brassica oleracea HOM05D005614 ORTHO05D006759 4.7e-108 395.2 319 64.6
arahy.Tifrunner.gnm1.ann1.MKV7IN Arachis hypogaea HOM05D005614 ORTHO05D006759 1.8e-107 393.3 309 66.7
BcaC05g25728 Brassica carinata HOM05D005614 ORTHO05D006759 5.2e-107 391.7 321 63.6
SalBow3G0912 Salvia bowleyana HOM05D005614 ORTHO05D006759 5.2e-107 391.7 319 65.5
BcaB03g12976 Brassica carinata HOM05D005614 ORTHO05D006759 6.8e-107 391.3 321 64.2
CARHR018930 Cardamine hirsuta HOM05D005614 ORTHO05D006759 6.8e-107 391.3 318 65.7
PGSC0003DMG400026996 Solanum tuberosum HOM05D005614 ORTHO05D006759 6.8e-107 391.3 318 64.2
CAN.G628.77 Capsicum annuum HOM05D005614 ORTHO05D006759 8.9e-107 391.0 316 64.9
Solyc06g071450.4 Solanum lycopersicum HOM05D005614 ORTHO05D006759 2.0e-106 389.8 317 64.0
CSS0020697 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 4.4e-106 388.7 320 65.6
Sopen06g027730 Solanum pennellii HOM05D005614 ORTHO05D006759 2.9e-105 386.0 317 63.4
Duzib041G0760 Durio zibethinus HOM05D005614 ORTHO05D006759 3.7e-105 385.6 311 65.6
DCAR_017415 Daucus carota HOM05D005614 ORTHO05D006759 8.3e-105 384.4 317 64.0
BolC8t49486H Brassica oleracea HOM05D005614 ORTHO05D006759 3.2e-104 382.5 323 61.3
Nitab4.5_0000866g0090 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.0e-102 377.5 339 61.4
Oeu024691.1 Olea europaea HOM05D005614 ORTHO05D006759 1.7e-102 376.7 301 67.4
Rhsim11G0047100 Rhododendron simsii HOM05D005614 ORTHO05D006759 6.6e-102 374.8 301 66.1
Cc04_g13870 Coffea canephora HOM05D005614 ORTHO05D006759 8.6e-102 374.4 312 64.4
C08p18540 Brassica napus HOM05D005614 ORTHO05D006759 2.5e-101 372.9 302 62.9
BraA08t34975Z Brassica rapa HOM05D005614 ORTHO05D006759 2.1e-100 369.8 317 60.3
vmacro14329 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 2.1e-100 369.8 304 66.1
A08p30430 Brassica napus HOM05D005614 ORTHO05D006759 2.3e-99 366.3 314 60.2
Nitab4.5_0001017g0060 Nicotiana tabacum HOM05D005614 ORTHO05D006759 2.3e-99 366.3 317 63.1
COL.COLO4_35944 Corchorus olitorius HOM05D005614 ORTHO05D006759 4.4e-98 362.1 277 69.7
Duzib093G1836 Durio zibethinus HOM05D005614 ORTHO05D006759 1.3e-97 360.5 322 62.1
HPP92_013333 Vanilla planifolia HOM05D005614 ORTHO05D006759 4.6e-95 352.1 326 58.9
Manes.02G162200 Manihot esculenta HOM05D005614 ORTHO05D006759 7.8e-95 351.3 262 69.8
Os02g0125800 Oryza sativa ssp. japonica HOM05D005614 ORTHO05D006759 3.9e-94 349.0 309 57.0
Zm00001eb208710 Zea mays HOM05D005614 ORTHO05D006759 2.9e-89 332.8 317 56.2
ATR0684G165 Amborella trichopoda HOM05D005614 ORTHO05D006759 6.4e-89 331.6 298 60.1
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 9.3e-88 327.8 269 62.8
EL10Ac1g01047 Beta vulgaris HOM05D005614 ORTHO05D006759 9.6e-85 317.8 324 55.9
Hund27024 Selenicereus undatus HOM05D005614 ORTHO05D006759 1.4e-83 313.9 267 63.7
Ah.05g170870 Amaranthus hybridus HOM05D005614 ORTHO05D006759 2.4e-83 313.2 268 62.3
Lsat_1_v5_gn_3_69700 Lactuca sativa HOM05D005614 ORTHO05D006759 9.0e-83 311.2 262 66.0
MELO3C008774.2 Cucumis melo HOM05D005614 ORTHO05D006759 5.8e-82 308.5 232 70.7
Gohir.D05G236900 Gossypium hirsutum HOM05D005614 ORTHO05D006759 1.3e-81 307.4 231 69.3
SalBow7G1071 Salvia bowleyana HOM05D005614 ORTHO05D006759 2.9e-81 306.2 264 64.0
Nn8g39974 Nelumbo nucifera HOM05D005614 ORTHO05D006759 9.3e-80 301.2 259 63.7
Eucgr.G01112 Eucalyptus grandis HOM05D005614 ORTHO05D006759 1.7e-78 297.0 236 65.3
Sabra05G0133300 Salix brachista HOM05D005614 ORTHO05D006759 1.6e-76 290.4 286 58.0
Pp3c2_3680 Physcomitrium patens HOM05D005614 ORTHO05D006759 2.8e-76 289.7 321 48.6
AUR62019050 Chenopodium quinoa HOM05D005614 ORTHO05D006759 4.0e-75 285.8 264 57.2
Mapoly0044s0012 Marchantia polymorpha HOM05D005614 ORTHO05D006759 9.0e-75 284.6 320 46.9
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 1.6e-68 263.8 242 60.3
SGA_v2.0_scaffold31G12915 Striga asiatica HOM05D005614 ORTHO05D006759 4.0e-67 259.2 235 61.3
MBI03_g33030_MAGBIO Magnolia biondii HOM05D005614 ORTHO05D006759 9.0e-67 258.1 266 56.4
Nitab4.5_0000003g0570 Nicotiana tabacum HOM05D005614 ORTHO05D006759 2.9e-65 253.1 259 57.1
TWI75G0111 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 1.1e-61 241.1 195 67.7
Haze_00457 Corylus avellana HOM05D005614 ORTHO05D006759 4.8e-60 235.7 199 65.3
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 3.1e-59 233.0 333 40.2
Peaxi162Scf00689g00225 Petunia axillaris HOM05D005614 ORTHO05D006759 2.9e-57 226.5 241 55.2
Oeu022164.1 Olea europaea HOM05D005614 ORTHO05D006759 2.5e-56 223.4 170 67.1
CDE06G0499 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 4.2e-56 222.6 207 57.0
TPR.G24041 Trifolium pratense HOM05D005614 ORTHO05D006759 6.3e-52 208.8 196 59.2
vmacro00825 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 6.3e-52 208.8 253 52.6
Psat5g132360 Pisum sativum HOM05D005614 ORTHO05D006759 1.7e-49 200.7 165 63.6
Psat5g132400 Pisum sativum HOM05D005614 ORTHO05D006759 1.7e-49 200.7 123 75.6
CDE12G0551 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 8.2e-44 181.8 132 69.7
TPR.G40310 Trifolium pratense HOM05D001808 ORTHO05D001747 5.0e-41 172.6 126 66.7
Lj4A622G15 Lonicera japonica HOM05D005614 ORTHO05D006759 2.0e-34 150.6 85 85.9
Lj4A622G16 Lonicera japonica HOM05D005614 ORTHO05D006759 2.6e-34 150.2 122 67.2
Cfa025530 Carpinus fangiana HOM05D005614 ORTHO05D006759 7.7e-34 148.7 334 32.0
Cre03.g172050 Chlamydomonas reinhardtii HOM05D005614 ORTHO05D006759 1.7e-33 147.5 296 33.1
SEGI_10746 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 3.8e-33 146.4 154 51.9
Haze_00458 Corylus avellana HOM05D005614 ORTHO05D006759 5.0e-33 146.0 83 81.9
SEGI_11087 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 1.0e-30 138.3 108 64.8
MCO01G384 Micromonas commoda HOM05D005614 ORTHO05D006759 9.4e-24 115.2 260 30.4
Ca_31116_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 1.5e-21 107.8 92 64.1
PRCOL_00005856 Prasinoderma coloniale HOM05D005614 ORTHO05D006759 2.6e-21 107.1 122 43.4
QL09p036498 Quercus lobata HOM05D005614 ORTHO05D006759 2.6e-21 107.1 86 66.3
CAN.G964.16 Capsicum annuum HOM05D005614 ORTHO05D006759 7.0e-19 99.0 105 53.3
SMO358G0086 Selaginella moellendorffii HOM05D005614 ORTHO05D006759 1.7e-17 94.4 175 36.6
RhsimUnG0102200 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.6e-15 87.8 89 58.4
Rhsim02G0185400 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.1e-11 75.1 85 57.6
TPR.G32 Trifolium pratense HOM05D005614 ORTHO05D006759 2.9e-09 67.0 31 80.6
Cfa016005 Carpinus fangiana HOM05D005614 ORTHO05D006759 5.0e-09 66.2 51 66.7
Rhsim03G0117800 Rhododendron simsii HOM05D005614 ORTHO05D006759 8.0e-07 58.9 51 58.8


User provided reference genes

Program Settings