Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN25G2354 Fragaria x ananassa HOM05D003093 ORTHO05D004301 8.2e-128 460.7 285 100.0
FAN23G2086 Fragaria x ananassa HOM05D000539 ORTHO05D023197 4.7e-123 444.9 274 98.9
FAN06G1239 Fragaria x ananassa HOM05D003093 ORTHO05D004301 9.8e-105 384.0 270 84.8
FAN10G3079 Fragaria x ananassa HOM05D003093 ORTHO05D004301 3.5e-102 375.6 281 88.6
FAN06G3924 Fragaria x ananassa HOM05D003093 ORTHO05D004301 4.4e-97 358.6 270 87.4
FAN03G1537 Fragaria x ananassa HOM05D003093 ORTHO05D004301 6.0e-86 321.6 187 93.0
FAN01G1115 Fragaria x ananassa HOM05D003093 ORTHO05D004301 5.1e-69 265.4 281 68.7
FvH4_2g04410 Fragaria vesca HOM05D003093 ORTHO05D004301 7.4e-52 208.4 141 79.4
FvH4_7g20820 Fragaria vesca HOM05D003093 ORTHO05D004301 3.9e-45 186.0 108 91.7
MD07G1185000 Malus domestica HOM05D003093 ORTHO05D004301 2.2e-35 153.7 216 50.0
RcHm_v2.0_Chr1g0365041 Rosa chinensis HOM05D003093 ORTHO05D004301 3.4e-33 146.4 204 53.9
MD01G1117500 Malus domestica HOM05D003093 ORTHO05D004301 1.3e-32 144.4 227 48.0
Eucgr.G02772 Eucalyptus grandis HOM05D003093 ORTHO05D004301 4.8e-27 125.9 208 51.0
Cpa.g.sc1.306 Carica papaya HOM05D003093 ORTHO05D004301 1.2e-25 121.3 193 52.3
Sabra10G0165100 Salix brachista HOM05D003093 ORTHO05D004301 7.7e-25 118.6 229 45.9
Potri.008G048000 Populus trichocarpa HOM05D003093 ORTHO05D004301 1.1e-23 114.8 219 44.7
GSVIVG01032624001 Vitis vinifera HOM05D003093 ORTHO05D004301 1.4e-23 114.4 180 48.9
TWI38G0009 Tripterygium wilfordii HOM05D003093 ORTHO05D004301 7.2e-23 112.1 212 43.9
Ciclev10030694m.g Citrus clementina HOM05D003093 ORTHO05D004301 2.1e-22 110.5 180 49.4
Lj1A929G70 Lonicera japonica HOM05D003093 ORTHO05D004301 4.7e-22 109.4 226 40.7
Dinv31391 Davidia involucrata HOM05D003093 ORTHO05D004301 6.1e-22 109.0 125 56.8
QL08p057653 Quercus lobata HOM05D003093 ORTHO05D004301 8.0e-22 108.6 233 42.1
Potri.010G213300 Populus trichocarpa HOM05D003093 ORTHO05D004301 1.4e-21 107.8 174 47.1
Hma1.2p1_0207F.1_g087910 Hydrangea macrophylla HOM05D003093 ORTHO05D004301 3.0e-21 106.7 133 52.6
ClCG02G013660 Citrullus lanatus HOM05D003093 ORTHO05D004301 1.1e-20 104.8 207 43.0
Sed0012201 Sechium edule HOM05D003093 ORTHO05D004301 1.1e-20 104.8 209 43.1
MBI05_g32633_MAGBIO Magnolia biondii HOM05D003093 ORTHO05D004301 2.6e-20 103.6 223 42.6
TPR.G10418 Trifolium pratense HOM05D003093 ORTHO05D004301 5.7e-20 102.4 223 43.5
CsaV3_5G006530 Cucumis sativus L. HOM05D003093 ORTHO05D004301 9.7e-20 101.7 216 43.5
Rhsim03G0125400 Rhododendron simsii HOM05D003093 ORTHO05D004301 2.2e-19 100.5 211 42.7
VMungo0720G2412 Vigna mungo HOM05D003093 ORTHO05D004301 1.1e-18 98.2 180 46.1
Cfa001556 Carpinus fangiana HOM05D003093 ORTHO05D004301 1.8e-18 97.4 196 44.4
MELO3C023809.2 Cucumis melo HOM05D003093 ORTHO05D004301 1.8e-18 97.4 216 44.9
Haze_16975 Corylus avellana HOM05D003093 ORTHO05D004301 3.1e-18 96.7 218 43.6
VMungo0720G2126 Vigna mungo HOM05D003093 ORTHO05D004301 3.1e-18 96.7 219 42.0
vmacro07110 Vaccinium macrocarpon HOM05D003093 ORTHO05D004301 7.0e-18 95.5 219 41.6
Atru.chr12.587 Acer truncatum HOM05D003093 ORTHO05D023197 9.1e-18 95.1 111 55.0
CANSAT78G1625 Cannabis sativa HOM05D003093 ORTHO05D004301 9.1e-18 95.1 169 43.2
Glyma.01G229700 Glycine max HOM05D003093 ORTHO05D004301 9.1e-18 95.1 246 41.1
Sabra08G0034200 Salix brachista HOM05D003093 ORTHO05D004301 1.6e-17 94.4 111 56.8
arahy.Tifrunner.gnm1.ann1.59ZZV8 Arachis hypogaea HOM05D003093 ORTHO05D004301 3.5e-17 93.2 154 44.2
arahy.Tifrunner.gnm1.ann1.YKFK84 Arachis hypogaea HOM05D003093 ORTHO05D004301 7.7e-17 92.0 154 44.2
Lsat_1_v5_gn_3_65860 Lactuca sativa HOM05D003093 ORTHO05D004301 1.0e-16 91.7 231 35.5
PSO675G6375 Papaver somniferum HOM05D003093 ORTHO05D004301 1.7e-16 90.9 106 54.7
Actinidia38222 Actinidia chinensis HOM05D003093 ORTHO05D004301 3.8e-16 89.7 129 49.6
Glyma.11G012500 Glycine max HOM05D003093 ORTHO05D004301 3.8e-16 89.7 226 42.5
Phvul.007G008300 Phaseolus vulgaris HOM05D003093 ORTHO05D004301 5.0e-16 89.4 181 43.1
TAR623G1133 Trochodendron aralioides HOM05D003093 ORTHO05D004301 1.5e-15 87.8 330 36.1
PSO541G5925 Papaver somniferum HOM05D003093 ORTHO05D004301 2.5e-15 87.0 202 40.1
Migut.F00813 Erythranthe guttata HOM05D003093 ORTHO05D004301 9.4e-15 85.1 174 41.4
Lalb_Chr02g0143891 Lupinus albus HOM05D003093 ORTHO05D004301 3.6e-14 83.2 303 39.3
Psat6g240760 Pisum sativum HOM05D003093 ORTHO05D004301 3.6e-14 83.2 275 42.5
AUR62025537 Chenopodium quinoa HOM05D003093 ORTHO05D004301 1.8e-13 80.9 133 45.1
Glyma.20G241900 Glycine max HOM05D003093 ORTHO05D004301 3.0e-13 80.1 207 40.1
Lj5g0014436 Lotus japonicus HOM05D003093 ORTHO05D004301 4.0e-13 79.7 141 45.4
Ca_11321_v3 Cicer arietinum L. HOM05D003093 ORTHO05D004301 6.8e-13 79.0 286 40.6
TPR.G27039 Trifolium pratense HOM05D003093 ORTHO05D004301 1.5e-12 77.8 167 37.7
ECA233G1939 Erigeron canadensis HOM05D003093 ORTHO05D004301 2.6e-12 77.0 181 38.7
Aqoxy1G01978 Aquilegia oxysepala HOM05D003093 ORTHO05D004301 5.7e-12 75.9 236 35.6
EL10Ac2g03490 Beta vulgaris HOM05D003093 ORTHO05D004301 1.7e-11 74.3 181 37.6
THA.LOC104827309 Tarenaya hassleriana HOM05D003093 ORTHO05D004301 2.8e-11 73.6 261 43.7
Hund22429 Selenicereus undatus HOM05D003093 ORTHO05D004301 6.3e-11 72.4 199 34.7
Ah.10g033320 Amaranthus hybridus HOM05D003093 ORTHO05D004301 8.3e-11 72.0 93 52.7
CARHR027510 Cardamine hirsuta HOM05D003093 ORTHO05D004301 8.3e-11 72.0 143 44.1
Nitab4.5_0000914g0160 Nicotiana tabacum HOM05D003093 ORTHO05D023197 8.3e-11 72.0 157 39.5
Sp1g24240 Schrenkiella parvula HOM05D003093 ORTHO05D004301 8.3e-11 72.0 94 52.1
unitig_88.g27763 Utricularia gibba HOM05D003093 ORTHO05D004301 8.3e-11 72.0 181 37.0
AUR62042671 Chenopodium quinoa HOM05D003093 ORTHO05D004301 1.1e-10 71.6 102 50.0
Medtr1g115920 Medicago truncatula HOM05D003093 ORTHO05D004301 1.1e-10 71.6 165 38.2
CSS0050146 Camellia sinensis var. sinensis HOM05D003093 ORTHO05D004301 2.4e-10 70.5 252 34.5
DCAR_027695 Daucus carota HOM05D003093 ORTHO05D004301 2.4e-10 70.5 197 39.6
Rhsim09G0156000 Rhododendron simsii HOM05D003093 ORTHO05D004301 3.1e-10 70.1 107 45.8
PGR142G0268 Punica granatum HOM05D003093 ORTHO05D004301 5.3e-10 69.3 196 38.8
CDE10G0729 Ceratophyllum demersum HOM05D003093 ORTHO05D004301 9.1e-10 68.6 173 37.6
Oeu009483.1 Olea europaea HOM05D003093 ORTHO05D004301 2.0e-09 67.4 88 51.1
Oeu009484.1 Olea europaea HOM05D003093 ORTHO05D004301 2.0e-09 67.4 88 51.1
SGA_v2.0_scaffold2G01039 Striga asiatica HOM05D003093 ORTHO05D004301 2.7e-09 67.0 153 35.9
Carub.0001s2649 Capsella rubella HOM05D003093 ORTHO05D004301 3.5e-09 66.6 95 55.8
Oeu039037.3 Olea europaea HOM05D003093 ORTHO05D004301 3.5e-09 66.6 99 45.5
HanXRQChr15g0482981 Helianthus annuus HOM05D003093 ORTHO05D004301 4.5e-09 66.2 258 33.3
MELO3C030596.2 Cucumis melo HOM05D003093 ORTHO05D023197 5.9e-09 65.9 78 55.1
SalBow3G0936 Salvia bowleyana HOM05D003093 ORTHO05D004301 5.9e-09 65.9 148 37.8
ATR0580G275 Amborella trichopoda HOM05D003093 ORTHO05D004301 1.3e-08 64.7 145 40.0
Gohir.D10G218100 Gossypium hirsutum HOM05D003093 ORTHO05D004301 2.2e-08 63.9 116 45.7
Gorai.011G244700 Gossypium raimondii HOM05D003093 ORTHO05D004301 2.2e-08 63.9 116 45.7
Phvul.002G037600 Phaseolus vulgaris HOM05D003093 ORTHO05D004301 2.2e-08 63.9 212 36.8
unitig_32.g10676 Utricularia gibba HOM05D003093 ORTHO05D004301 2.2e-08 63.9 183 35.5
Gorai.010G203000 Gossypium raimondii HOM05D003093 ORTHO05D004301 2.9e-08 63.5 110 47.3
AL1G41570 Arabidopsis lyrata HOM05D003093 ORTHO05D004301 3.8e-08 63.2 159 37.7
Gohir.A10G209800 Gossypium hirsutum HOM05D003093 ORTHO05D004301 5.0e-08 62.8 116 44.8
CSS0040311 Camellia sinensis var. sinensis HOM05D003093 ORTHO05D004301 6.5e-08 62.4 241 30.7
SHI28152 Sapria himalayana HOM05D003093 ORTHO05D000168 8.5e-08 62.0 94 46.8
Peaxi162Scf00015g02612 Petunia axillaris HOM05D003093 ORTHO05D004301 1.1e-07 61.6 105 44.8
Duzib114G0430 Durio zibethinus HOM05D003093 ORTHO05D004301 1.9e-07 60.8 116 50.9
Duzib114G0987 Durio zibethinus HOM05D003093 ORTHO05D004301 1.9e-07 60.8 116 50.9
AT1G28060 Arabidopsis thaliana HOM05D003093 ORTHO05D004301 2.5e-07 60.5 146 41.1
PGSC0003DMG400023507 Solanum tuberosum HOM05D003093 ORTHO05D004301 2.5e-07 60.5 228 33.3
Thecc.10G062100 Theobroma cacao HOM05D003093 ORTHO05D004301 2.5e-07 60.5 116 45.7
Aa31sc146G40 Aethionema arabicum HOM05D003093 ORTHO05D004301 3.2e-07 60.1 128 40.6
Sc06g0001860 Simmondsia chinensis HOM05D003093 ORTHO05D004301 4.2e-07 59.7 141 39.0
Thhalv10006834m.g Eutrema salsugineum HOM05D003093 ORTHO05D004301 2.7e-06 57.0 65 55.4
HPP92_019592 Vanilla planifolia HOM05D003093 ORTHO05D004301 3.6e-06 56.6 224 32.1


User provided reference genes

Program Settings