Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G1197 Fragaria x ananassa HOM05D002561 ORTHO05D006466 3.9e-148 528.1 262 100.0
FAN24G0448 Fragaria x ananassa HOM05D002561 ORTHO05D006466 8.1e-130 467.2 231 100.0
FAN24G1576 Fragaria x ananassa HOM05D002561 ORTHO05D006466 8.1e-130 467.2 231 100.0
FvH4_4g08860 Fragaria vesca HOM05D002561 ORTHO05D006466 4.3e-46 189.1 150 68.0
FvH4_2g08930 Fragaria vesca HOM05D002561 ORTHO05D006466 1.2e-43 181.0 183 60.1
FAN20G3107 Fragaria x ananassa HOM05D002561 ORTHO05D006466 2.0e-35 153.7 229 45.0
FAN27G0984 Fragaria x ananassa HOM05D002561 ORTHO05D006466 2.0e-35 153.7 229 45.0
FAN15G2087 Fragaria x ananassa HOM05D002561 ORTHO05D006466 4.4e-35 152.5 229 44.5
FvH4_2g10410 Fragaria vesca HOM05D002561 ORTHO05D006466 3.7e-34 149.4 229 44.1
FvH4_4g09790 Fragaria vesca HOM05D002561 ORTHO05D006466 7.8e-32 141.7 183 50.3
RcHm_v2.0_Chr6g0267881 Rosa chinensis HOM05D002561 ORTHO05D006466 1.7e-31 140.6 229 42.4
MD08G1220200 Malus domestica HOM05D002561 ORTHO05D006466 1.6e-24 117.5 228 37.3
Prupe.6G177000 Prunus persica HOM05D002561 ORTHO05D006466 3.0e-23 113.2 228 36.8
FAN24G2704 Fragaria x ananassa HOM05D002561 ORTHO05D006466 5.1e-23 112.5 139 50.4
Nn1g06426 Nelumbo nucifera HOM05D002561 ORTHO05D006466 6.6e-23 112.1 150 45.3
Lj8C108T5 Lonicera japonica HOM05D002561 ORTHO05D006466 1.1e-22 111.3 150 43.3
Prupe.1G573700 Prunus persica HOM05D002561 ORTHO05D006466 2.5e-22 110.2 228 37.3
CSS0024007 Camellia sinensis var. sinensis HOM05D002561 ORTHO05D006466 3.3e-22 109.8 228 35.1
Dinv07536 Davidia involucrata HOM05D002561 ORTHO05D006466 3.3e-22 109.8 150 44.7
Actinidia11101 Actinidia chinensis HOM05D002561 ORTHO05D006466 7.3e-22 108.6 150 42.7
PSO782G0979 Papaver somniferum HOM05D002561 ORTHO05D006466 7.3e-22 108.6 150 44.0
Solyc07g053660.3 Solanum lycopersicum HOM05D002561 ORTHO05D006466 7.3e-22 108.6 150 42.7
Sopen07g027630 Solanum pennellii HOM05D002561 ORTHO05D006466 7.3e-22 108.6 150 42.7
CiPaw.03G181000 Carya illinoinensis HOM05D002561 ORTHO05D006466 9.6e-22 108.2 228 36.4
TAR624G0407 Trochodendron aralioides HOM05D002561 ORTHO05D006466 9.6e-22 108.2 150 43.3
TAR626G1404 Trochodendron aralioides HOM05D002561 ORTHO05D006466 9.6e-22 108.2 150 43.3
Dinv10164 Davidia involucrata HOM05D002561 ORTHO05D006466 1.2e-21 107.8 150 43.3
Manes.13G142500 Manihot esculenta HOM05D002561 ORTHO05D006466 1.6e-21 107.5 196 36.7
Rhsim06G0138000 Rhododendron simsii HOM05D002561 ORTHO05D006466 1.6e-21 107.5 228 34.2
PGSC0003DMG401009395 Solanum tuberosum HOM05D002561 ORTHO05D006466 2.1e-21 107.1 150 42.0
MSTRG.15131 Avicennia marina HOM05D002561 ORTHO05D006466 2.8e-21 106.7 150 44.7
Cfa014656 Carpinus fangiana HOM05D002561 ORTHO05D006466 2.8e-21 106.7 228 34.6
CAN.G209.6 Capsicum annuum HOM05D002561 ORTHO05D006466 3.6e-21 106.3 150 41.3
PSO210G7210 Papaver somniferum HOM05D002561 ORTHO05D006466 6.2e-21 105.5 150 42.7
PSO832G1390 Papaver somniferum HOM05D002561 ORTHO05D006466 6.2e-21 105.5 150 42.7
GSVIVG01020601001 Vitis vinifera HOM05D002561 ORTHO05D006466 8.1e-21 105.1 150 43.3
MBI07_g29117_MAGBIO Magnolia biondii HOM05D002561 ORTHO05D006466 1.1e-20 104.8 150 42.7
Actinidia11004 Actinidia chinensis HOM05D002561 ORTHO05D006466 1.4e-20 104.4 150 42.0
Haze_13235 Corylus avellana HOM05D002561 ORTHO05D006466 1.4e-20 104.4 150 42.7
Haze_13238 Corylus avellana HOM05D002561 ORTHO05D006466 1.4e-20 104.4 150 42.7
Peaxi162Scf00845g00022 Petunia axillaris HOM05D002561 ORTHO05D006466 1.8e-20 104.0 150 42.7
ECA240G2497 Erigeron canadensis HOM05D002561 ORTHO05D006466 3.1e-20 103.2 150 42.0
Cc05_g07670 Coffea canephora HOM05D002561 ORTHO05D006466 6.8e-20 102.1 150 42.0
HanXRQChr05g0140561 Helianthus annuus HOM05D002561 ORTHO05D006466 6.8e-20 102.1 150 42.0
Sc24g0000990 Simmondsia chinensis HOM05D002561 ORTHO05D006466 1.2e-19 101.3 155 40.6
vmacro12361 Vaccinium macrocarpon HOM05D002561 ORTHO05D006466 1.2e-19 101.3 228 32.9
CDE04G0034 Ceratophyllum demersum HOM05D002561 ORTHO05D006466 1.5e-19 100.9 150 40.7
FvH4_4g08600 Fragaria vesca HOM05D000107 ORTHO05D006466 2.0e-19 100.5 67 80.6
Ciclev10015209m.g Citrus clementina HOM05D002561 ORTHO05D006466 2.6e-19 100.1 150 41.3
CsaV3_7G003080 Cucumis sativus L. HOM05D002561 ORTHO05D006466 3.4e-19 99.8 228 33.3
Nitab4.5_0000621g0150 Nicotiana tabacum HOM05D002561 ORTHO05D006466 4.4e-19 99.4 150 39.3
SGA_v2.0_scaffold70G23496 Striga asiatica HOM05D002561 ORTHO05D006466 4.4e-19 99.4 150 42.0
Cpa.g.sc83.89 Carica papaya HOM05D002561 ORTHO05D006466 5.8e-19 99.0 150 40.7
ClCG02G002370 Citrullus lanatus HOM05D002561 ORTHO05D006466 5.8e-19 99.0 228 32.9
Atru.chr6.2875 Acer truncatum HOM05D002561 ORTHO05D006466 7.6e-19 98.6 150 41.3
CDE03G0236 Ceratophyllum demersum HOM05D002561 ORTHO05D006466 1.7e-18 97.4 150 40.0
Migut.D00238 Erythranthe guttata HOM05D002561 ORTHO05D006466 1.7e-18 97.4 150 43.3
CANSAT64G1696 Cannabis sativa HOM05D002561 ORTHO05D006466 2.2e-18 97.1 150 40.7
Thhalv10025176m.g Eutrema salsugineum HOM05D002561 ORTHO05D006466 2.9e-18 96.7 150 40.0
MELO3C018869.2 Cucumis melo HOM05D002561 ORTHO05D006466 4.9e-18 95.9 228 32.5
Eucgr.K01052 Eucalyptus grandis HOM05D002561 ORTHO05D006466 8.4e-18 95.1 228 32.9
AL7G24110 Arabidopsis lyrata HOM05D002561 ORTHO05D006466 1.1e-17 94.7 150 39.3
Duzib052G0349 Durio zibethinus HOM05D002561 ORTHO05D006466 1.1e-17 94.7 150 41.3
Lj3g0012051 Lotus japonicus HOM05D002561 ORTHO05D006466 1.1e-17 94.7 155 40.6
Gorai.005G199500 Gossypium raimondii HOM05D002561 ORTHO05D006466 1.4e-17 94.4 150 39.3
AT4G28450 Arabidopsis thaliana HOM05D002561 ORTHO05D006466 1.9e-17 94.0 150 39.3
Glyma.02G251700 Glycine max HOM05D002561 ORTHO05D006466 1.9e-17 94.0 155 36.8
Lsat_1_v5_gn_4_64440 Lactuca sativa HOM05D002561 ORTHO05D006466 1.9e-17 94.0 150 40.7
Nitab4.5_0004546g0040 Nicotiana tabacum HOM05D002561 ORTHO05D006466 1.9e-17 94.0 150 40.0
Ca_13381_v3 Cicer arietinum L. HOM05D002561 ORTHO05D006466 2.4e-17 93.6 210 34.3
Ca_30047_v3 Cicer arietinum L. HOM05D002561 ORTHO05D006466 2.4e-17 93.6 210 34.3
Hma1.2p1_0002F.1_g002200 Hydrangea macrophylla HOM05D002561 ORTHO05D006466 2.4e-17 93.6 150 40.0
Sed0023046 Sechium edule HOM05D002561 ORTHO05D006466 2.4e-17 93.6 150 39.3
Carub.0007s1225 Capsella rubella HOM05D002561 ORTHO05D006466 5.4e-17 92.4 150 39.3
Gohir.A03G154700 Gossypium hirsutum HOM05D002561 ORTHO05D006466 5.4e-17 92.4 150 40.0
THA.LOC104804051 Tarenaya hassleriana HOM05D002561 ORTHO05D006466 5.4e-17 92.4 150 40.7
Aqoxy4G00646 Aquilegia oxysepala HOM05D002561 ORTHO05D006466 7.1e-17 92.0 192 36.5
arahy.Tifrunner.gnm1.ann1.TSZ6TX Arachis hypogaea HOM05D002561 ORTHO05D006466 9.3e-17 91.7 150 40.7
arahy.Tifrunner.gnm1.ann1.UE4GYS Arachis hypogaea HOM05D002561 ORTHO05D006466 9.3e-17 91.7 150 40.7
COL.COLO4_28034 Corchorus olitorius HOM05D002561 ORTHO05D006466 9.3e-17 91.7 150 40.0
Phvul.006G037700 Phaseolus vulgaris HOM05D002561 ORTHO05D006466 1.2e-16 91.3 150 40.0
Thecc.02G185400 Theobroma cacao HOM05D002561 ORTHO05D006466 1.2e-16 91.3 150 40.0
Gohir.D02G177700 Gossypium hirsutum HOM05D002561 ORTHO05D006466 1.6e-16 90.9 150 38.7
Sabra07G0110300 Salix brachista HOM05D002292 ORTHO05D003256 1.6e-16 90.9 238 31.1
PGR142G4043 Punica granatum HOM05D002561 ORTHO05D006466 2.7e-16 90.1 151 39.7
unitig_85.g27364 Utricularia gibba HOM05D002561 ORTHO05D006466 2.7e-16 90.1 220 31.8
Aa31LG2G21970 Aethionema arabicum HOM05D002561 ORTHO05D006466 3.5e-16 89.7 150 38.0
Ah.03g138410 Amaranthus hybridus HOM05D002561 ORTHO05D006466 4.6e-16 89.4 155 39.4
Potri.017G014700 Populus trichocarpa HOM05D002561 ORTHO05D006466 4.6e-16 89.4 150 39.3
Potri.007G137300 Populus trichocarpa HOM05D002561 ORTHO05D006466 6.0e-16 89.0 150 39.3
C07p56220 Brassica napus HOM05D002561 ORTHO05D006466 7.8e-16 88.6 149 39.6
FvH4_5g00280 Fragaria vesca HOM05D005270 ORTHO05D006239 7.8e-16 88.6 56 85.7
BolC7t46099H Brassica oleracea HOM05D002561 ORTHO05D006466 1.0e-15 88.2 149 38.9
Sp7g26430 Schrenkiella parvula HOM05D002561 ORTHO05D006466 1.0e-15 88.2 150 39.3
EL10Ac9g20811 Beta vulgaris HOM05D002561 ORTHO05D006466 1.3e-15 87.8 155 39.4
Hund07915 Selenicereus undatus HOM05D002561 ORTHO05D006466 1.3e-15 87.8 155 38.7
ATR0665G052 Amborella trichopoda HOM05D002561 ORTHO05D006466 1.7e-15 87.4 150 38.0
BcaC06g32621 Brassica carinata HOM05D002561 ORTHO05D006466 3.0e-15 86.7 149 38.9
FAN08G1405 Fragaria x ananassa HOM05D005270 ORTHO05D006239 3.0e-15 86.7 56 83.9
Medtr1g022960 Medicago truncatula HOM05D002561 ORTHO05D006466 3.0e-15 86.7 150 38.0
Sabra17G0011900 Salix brachista HOM05D002561 ORTHO05D006466 3.0e-15 86.7 150 40.0
A03p58100 Brassica napus HOM05D002561 ORTHO05D006466 3.9e-15 86.3 149 38.9
BraA03t14876Z Brassica rapa HOM05D002561 ORTHO05D006466 3.9e-15 86.3 149 38.9
FAN04G3018 Fragaria x ananassa HOM05D005270 ORTHO05D006239 3.9e-15 86.3 56 83.9
FAN18G1040 Fragaria x ananassa HOM05D005270 ORTHO05D006239 3.9e-15 86.3 56 83.9
FAN26G1376 Fragaria x ananassa HOM05D005270 ORTHO05D006466 3.9e-15 86.3 51 90.2
Psat6g009760 Pisum sativum HOM05D002561 ORTHO05D006466 6.6e-15 85.5 155 38.1
CARHR236220 Cardamine hirsuta HOM05D002561 ORTHO05D006466 8.7e-15 85.1 150 38.7
FAN13G2928 Fragaria x ananassa HOM05D005270 ORTHO05D006239 1.5e-14 84.3 56 82.1
TPR.G22970 Trifolium pratense HOM05D002561 ORTHO05D006466 4.3e-14 82.8 155 38.1
TWI14G0319 Tripterygium wilfordii HOM05D002561 ORTHO05D006466 5.6e-14 82.4 228 30.7
Zm00001eb064830 Zea mays HOM05D002561 ORTHO05D006466 7.3e-14 82.0 155 34.8
TWI59G1106 Tripterygium wilfordii HOM05D002561 ORTHO05D006466 2.1e-13 80.5 228 30.7
DCAR_013032 Daucus carota HOM05D002561 ORTHO05D006466 4.8e-13 79.3 148 34.5
Os01g0238900 Oryza sativa ssp. japonica HOM05D002561 ORTHO05D006466 4.8e-13 79.3 150 34.7
Lalb_Chr25g0280621 Lupinus albus HOM05D002561 ORTHO05D006466 2.4e-12 77.0 150 34.0
HPP92_000278 Vanilla planifolia HOM05D002561 ORTHO05D006466 3.1e-12 76.6 150 34.0
AUR62025466 Chenopodium quinoa HOM05D002561 ORTHO05D006466 9.0e-12 75.1 155 35.5
TPR.G30494 Trifolium pratense HOM05D002561 ORTHO05D006466 1.2e-11 74.7 155 36.1
AUR62008772 Chenopodium quinoa HOM05D002561 ORTHO05D006466 1.5e-11 74.3 228 28.5
QL08p040074 Quercus lobata HOM05D002561 ORTHO05D006466 7.6e-11 72.0 150 34.7
AagrBONN_evm.TU.Sc2ySwM_117.187 Anthoceros agrestis HOM05D002561 ORTHO05D006466 6.4e-10 68.9 285 25.3
Pp3c9_6000 Physcomitrium patens HOM05D002561 ORTHO05D006466 4.6e-08 62.8 228 25.4
RcHm_v2.0_Chr7g0202331 Rosa chinensis HOM05D005270 ORTHO05D006239 6.0e-08 62.4 59 69.5
MD15G1410600 Malus domestica HOM05D002561 ORTHO05D006466 2.3e-07 60.5 113 39.8
CBR_g34460 Chara braunii HOM05D002561 ORTHO05D006466 5.1e-07 59.3 245 24.5


User provided reference genes

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