Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN24G1145 Fragaria x ananassa HOM05D000880 ORTHO05D008158 3.5e-73 278.1 132 100.0
FvH4_2g30661 Fragaria vesca HOM05D000880 ORTHO05D008158 2.5e-47 192.2 143 70.6
FAN24G1353 Fragaria x ananassa HOM05D000880 ORTHO05D008158 2.5e-47 192.2 143 70.6
RcHm_v2.0_Chr6g0312231 Rosa chinensis HOM05D000880 ORTHO05D008158 4.8e-46 188.0 143 68.5
FAN20G0534 Fragaria x ananassa HOM05D000880 ORTHO05D008158 1.8e-45 186.0 144 69.4
FvH4_2g30530 Fragaria vesca HOM05D000880 ORTHO05D008158 3.7e-38 161.8 79 97.5
MD15G1110200 Malus domestica HOM05D000880 ORTHO05D008158 1.4e-37 159.8 144 59.7
Potri.006G277500 Populus trichocarpa HOM05D000880 ORTHO05D008158 3.8e-35 151.8 141 54.6
CiPaw.07G214700 Carya illinoinensis HOM05D000880 ORTHO05D008158 1.9e-34 149.4 138 58.0
Atru.chr7.2669 Acer truncatum HOM05D000880 ORTHO05D008158 2.5e-34 149.1 136 56.6
Prupe.1G462400 Prunus persica HOM05D000880 ORTHO05D008158 3.2e-34 148.7 108 69.4
QL12p024664 Quercus lobata HOM05D000880 ORTHO05D008158 5.5e-34 147.9 136 56.6
CsaV3_3G046930 Cucumis sativus L. HOM05D000880 ORTHO05D008158 9.3e-34 147.1 142 58.5
Dinv26557 Davidia involucrata HOM05D000880 ORTHO05D008158 1.2e-33 146.7 143 55.9
Medtr3g108700 Medicago truncatula HOM05D000880 ORTHO05D008158 1.2e-33 146.7 135 55.6
Sed0006739 Sechium edule HOM05D000880 ORTHO05D008158 2.1e-33 146.0 138 58.0
ClCG05G017430 Citrullus lanatus HOM05D000880 ORTHO05D008158 2.7e-33 145.6 138 58.0
MELO3C003644.2 Cucumis melo HOM05D000880 ORTHO05D008158 2.7e-33 145.6 142 57.7
TAR626G1691 Trochodendron aralioides HOM05D000880 ORTHO05D008158 2.7e-33 145.6 141 53.2
Aqoxy7G02771 Aquilegia oxysepala HOM05D000880 ORTHO05D008158 3.6e-33 145.2 132 56.1
Duzib168G1559 Durio zibethinus HOM05D000880 ORTHO05D008158 3.6e-33 145.2 143 53.8
AUR62020632 Chenopodium quinoa HOM05D000880 ORTHO05D008158 4.6e-33 144.8 143 55.2
TPR.G12367 Trifolium pratense HOM05D000880 ORTHO05D008158 6.1e-33 144.4 141 52.5
Aqoxy3G04243 Aquilegia oxysepala HOM05D000880 ORTHO05D008158 7.9e-33 144.1 132 55.3
AUR62038750 Chenopodium quinoa HOM05D000880 ORTHO05D008158 1.0e-32 143.7 132 56.8
Ca_15679_v3 Cicer arietinum L. HOM05D000880 ORTHO05D008158 1.3e-32 143.3 135 54.1
Manes.16G136800 Manihot esculenta HOM05D000880 ORTHO05D008158 1.3e-32 143.3 142 53.5
Lj1g0027131 Lotus japonicus HOM05D000880 ORTHO05D008158 2.3e-32 142.5 137 54.7
Sabra06G0215200 Salix brachista HOM05D000880 ORTHO05D008158 2.3e-32 142.5 146 53.4
Oeu014113.1 Olea europaea HOM05D000880 ORTHO05D008158 5.1e-32 141.4 142 54.9
Sc09g0007880 Simmondsia chinensis HOM05D000880 ORTHO05D008158 5.1e-32 141.4 141 53.9
Phvul.009G100200 Phaseolus vulgaris HOM05D000880 ORTHO05D008158 6.7e-32 141.0 141 53.2
Psat5g025080 Pisum sativum HOM05D000880 ORTHO05D008158 8.7e-32 140.6 133 54.9
TWI34G0460 Tripterygium wilfordii HOM05D000880 ORTHO05D008158 1.1e-31 140.2 142 52.8
Migut.A00456 Erythranthe guttata HOM05D000880 ORTHO05D008158 1.9e-31 139.4 139 56.1
Lalb_Chr23g0268901 Lupinus albus HOM05D000880 ORTHO05D008158 1.9e-31 139.4 135 55.6
Eucgr.C03997 Eucalyptus grandis HOM05D000880 ORTHO05D008158 2.5e-31 139.0 119 62.2
MSTRG.25767 Avicennia marina HOM05D000880 ORTHO05D008158 3.3e-31 138.7 132 54.5
arahy.Tifrunner.gnm1.ann1.95FWWQ Arachis hypogaea HOM05D000880 ORTHO05D008158 4.3e-31 138.3 130 55.4
arahy.Tifrunner.gnm1.ann1.C9KM7P Arachis hypogaea HOM05D000880 ORTHO05D008158 4.3e-31 138.3 130 55.4
EL10Ac2g03714 Beta vulgaris HOM05D000880 ORTHO05D008158 4.3e-31 138.3 132 53.8
Ciclev10010501m.g Citrus clementina HOM05D000880 ORTHO05D008158 4.3e-31 138.3 138 55.1
SGA_v2.0_scaffold27G11654 Striga asiatica HOM05D000880 ORTHO05D008158 5.7e-31 137.9 150 52.0
GSVIVG01035548001 Vitis vinifera HOM05D000880 ORTHO05D008158 5.7e-31 137.9 142 51.4
VMungo1309G2560 Vigna mungo HOM05D000880 ORTHO05D008158 7.4e-31 137.5 142 52.1
Glyma.04G074500 Glycine max HOM05D000880 ORTHO05D008158 9.7e-31 137.1 136 55.9
PGR044G0601 Punica granatum HOM05D000880 ORTHO05D008158 1.3e-30 136.7 132 53.8
Cpa.g.sc244.8 Carica papaya HOM05D000880 ORTHO05D008158 1.7e-30 136.3 132 53.0
CSS0016378 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D008158 2.2e-30 136.0 136 52.9
Thhalv10003995m.g Eutrema salsugineum HOM05D000880 ORTHO05D008158 2.2e-30 136.0 144 52.8
Nn8g40848 Nelumbo nucifera HOM05D000880 ORTHO05D008158 2.2e-30 136.0 132 50.8
THA.LOC104803319 Tarenaya hassleriana HOM05D000880 ORTHO05D008158 2.2e-30 136.0 142 53.5
Actinidia03580 Actinidia chinensis HOM05D000880 ORTHO05D008158 2.8e-30 135.6 144 51.4
Ah.10g033780 Amaranthus hybridus HOM05D000880 ORTHO05D008158 2.8e-30 135.6 139 52.5
PSO421G0529 Papaver somniferum HOM05D000880 ORTHO05D008158 2.8e-30 135.6 133 54.1
Rhsim07G0170300 Rhododendron simsii HOM05D000880 ORTHO05D008158 3.7e-30 135.2 143 53.1
CSS0036637 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D008158 4.8e-30 134.8 136 52.2
PSO423G0300 Papaver somniferum HOM05D000880 ORTHO05D008158 4.8e-30 134.8 133 54.1
Carub.0006s2270 Capsella rubella HOM05D000880 ORTHO05D008158 1.1e-29 133.7 142 52.1
unitig_748.g8176 Utricularia gibba HOM05D002718 ORTHO05D003269 1.1e-29 133.7 142 52.1
BraA06t26486Z Brassica rapa HOM05D000880 ORTHO05D008158 1.4e-29 133.3 135 54.8
Cc00_g04770 Coffea canephora HOM05D000880 ORTHO05D008158 1.4e-29 133.3 121 57.0
Os06g0661800 Oryza sativa ssp. japonica HOM05D000880 ORTHO05D008158 1.4e-29 133.3 116 57.8
C07p42930 Brassica napus HOM05D005859 ORTHO05D008158 1.8e-29 132.9 135 54.1
C09p07120 Brassica napus HOM05D000880 ORTHO05D008158 1.8e-29 132.9 135 54.1
BolC7t44822H Brassica oleracea HOM05D005859 ORTHO05D008158 1.8e-29 132.9 135 54.1
BolC9t53624H Brassica oleracea HOM05D000880 ORTHO05D008158 1.8e-29 132.9 135 54.1
AT5G24850 Arabidopsis thaliana HOM05D000880 ORTHO05D008158 2.4e-29 132.5 142 51.4
CDE02G2617 Ceratophyllum demersum HOM05D000880 ORTHO05D008158 2.4e-29 132.5 132 54.5
Gohir.D06G109200 Gossypium hirsutum HOM05D000880 ORTHO05D008158 2.4e-29 132.5 141 49.6
Gorai.010G124000 Gossypium raimondii HOM05D000880 ORTHO05D008158 2.4e-29 132.5 141 49.6
BcaC04g23563 Brassica carinata HOM05D000880 ORTHO05D008158 4.1e-29 131.7 134 53.0
A06p35620 Brassica napus HOM05D000880 ORTHO05D008158 4.1e-29 131.7 135 54.1
A09p06390 Brassica napus HOM05D000880 ORTHO05D008158 4.1e-29 131.7 135 54.1
BraA09t36284Z Brassica rapa HOM05D000880 ORTHO05D008158 4.1e-29 131.7 135 54.1
Nitab4.5_0000970g0030 Nicotiana tabacum HOM05D000880 ORTHO05D008158 4.1e-29 131.7 132 52.3
Hund06650 Selenicereus undatus HOM05D000880 ORTHO05D008158 4.1e-29 131.7 144 50.0
Peaxi162Scf00213g01024 Petunia axillaris HOM05D000880 ORTHO05D008158 5.3e-29 131.3 134 51.5
Gohir.A06G107000 Gossypium hirsutum HOM05D000880 ORTHO05D008158 1.2e-28 130.2 139 48.2
Nitab4.5_0000919g0070 Nicotiana tabacum HOM05D000880 ORTHO05D008158 1.2e-28 130.2 132 51.5
BcaB04g19802 Brassica carinata HOM05D000880 ORTHO05D008158 1.5e-28 129.8 133 54.1
C09p07080 Brassica napus HOM05D000880 ORTHO05D008158 2.6e-28 129.0 148 49.3
CAN.G195.2 Capsicum annuum HOM05D000880 ORTHO05D008158 2.6e-28 129.0 132 51.5
Lj8C467G5 Lonicera japonica HOM05D000880 ORTHO05D008158 2.6e-28 129.0 119 57.1
Sp2g22600 Schrenkiella parvula HOM05D000880 ORTHO05D008158 2.6e-28 129.0 138 52.2
CARHR188600 Cardamine hirsuta HOM05D000880 ORTHO05D008158 3.4e-28 128.6 121 57.0
Sopen08g022920 Solanum pennellii HOM05D000880 ORTHO05D008158 3.4e-28 128.6 138 50.7
PGSC0003DMG400029591 Solanum tuberosum HOM05D000880 ORTHO05D008158 3.4e-28 128.6 138 50.7
Aa31LG11G4060 Aethionema arabicum HOM05D000880 ORTHO05D008158 4.5e-28 128.3 134 53.0
AagrBONN_evm.TU.Sc2ySwM_368.3176 Anthoceros agrestis HOM05D000880 ORTHO05D008158 5.9e-28 127.9 125 53.6
DCAR_030962 Daucus carota HOM05D005064 ORTHO05D008158 7.7e-28 127.5 150 47.3
Solyc08g074270.4 Solanum lycopersicum HOM05D000880 ORTHO05D008158 7.7e-28 127.5 138 50.0
AL6G36510 Arabidopsis lyrata HOM05D000880 ORTHO05D008158 1.7e-27 126.3 142 50.7
Lj8C437G0 Lonicera japonica HOM05D000880 ORTHO05D008158 1.7e-27 126.3 119 54.6
Cfa013251 Carpinus fangiana HOM05D000880 ORTHO05D008158 2.2e-27 125.9 112 57.1
vmacro05105 Vaccinium macrocarpon HOM05D000880 ORTHO05D008158 3.8e-27 125.2 138 50.7
HPP92_021891 Vanilla planifolia HOM05D000880 ORTHO05D008158 6.5e-27 124.4 118 53.4
Pp3c21_7810 Physcomitrium patens HOM05D000880 ORTHO05D008158 1.9e-26 122.9 142 47.9
Haze_21695 Corylus avellana HOM05D000880 ORTHO05D008158 4.2e-26 121.7 161 43.5
Mapoly0002s0311 Marchantia polymorpha HOM05D000880 ORTHO05D008158 4.2e-26 121.7 133 49.6
SMO172G0045 Selaginella moellendorffii HOM05D000880 ORTHO05D008158 1.6e-25 119.8 121 48.8
SEGI_03504 Sequoiadendron giganteum HOM05D000880 ORTHO05D008158 1.6e-25 119.8 108 57.4
COL.COLO4_18614 Corchorus olitorius HOM05D000880 ORTHO05D008158 2.6e-23 112.5 64 78.1
Lj8C437G2 Lonicera japonica HOM05D000880 ORTHO05D008158 2.4e-21 105.9 90 57.8
CBR_g905 Chara braunii HOM05D000880 ORTHO05D008158 3.1e-21 105.5 166 41.0
vmacro05104 Vaccinium macrocarpon HOM05D000880 ORTHO05D008158 1.5e-20 103.2 94 56.4
ATR0626G237 Amborella trichopoda HOM05D000880 ORTHO05D008158 2.0e-20 102.8 103 52.4
Nitab4.5_0006693g0060 Nicotiana tabacum HOM05D000880 ORTHO05D283879 2.6e-15 85.9 103 43.7
MCO04G162 Micromonas commoda HOM05D000880 ORTHO05D008158 3.0e-08 62.4 107 35.5
Cre02.g078939 Chlamydomonas reinhardtii HOM05D000880 ORTHO05D008158 1.7e-06 56.6 149 28.9


User provided reference genes

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