Gene: PGR044G0601
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR044G0601
- Transcript Identifier PGR044G0601.01
- Gene Type Coding gene
- Location NC_045134.1 : 4752601-4756727 : negative
Gene Family Information
- ID HOM05D000880
- #Genes/#Species 677/100
- Phylogenetic origin
- ID ORTHO05D008158
- #Genes/#Species 122/92
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- pid XP_031374590.1
- name LOC116189178
- name XM_031518730.1
- id gene-LOC116189178
- uniprot A0A6P8BWA3
Descriptions
- product cryptochrome DASH, chloroplastic/mitochondrial, transcript variant X2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006281 | IEA | GOA Database | DNA repair | |
| GO:0006281 | IEA | InterPro | DNA repair | |
| GO:0018298 | IEA | GOA Database | protein-chromophore linkage | |
| GO:0000719 | ISO | PLAZA Integrative Orthology | photoreactive repair | AT5G24850 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003913 | IEA | GOA Database | DNA photolyase activity | |
| GO:0003913 | IEA | InterPro | DNA photolyase activity | |
| GO:0003677 | ISO | PLAZA Integrative Orthology | DNA binding | AT5G24850 |
| GO:0010181 | ISO | PLAZA Integrative Orthology | FMN binding | AT5G24850 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G24850 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G24850 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT5G24850 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002081 | Cryptochrome/DNA photolyase class 1 |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold |
| IPR014133 | Cryptochrome DASH |
| IPR005101 | Cryptochrome/DNA photolyase, FAD-binding domain |
| IPR036155 | Cryptochrome/photolyase, N-terminal domain superfamily |
| IPR006050 | DNA photolyase, N-terminal |
| IPR036134 | Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily |
| Mapman id | Description |
|---|---|
| 26.1.2.1.1 | External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.cryptochrome photoreceptor (CRY) |