Gene: C09p07080
General Information
Structural Information
- Species Brassica napus
- Gene Identifier C09p07080
- Transcript Identifier C09p07080
- Gene Type Coding gene
- Location C09 : 4126655-4136651 : positive
Gene Family Information
- ID HOM05D000880
- #Genes/#Species 677/100
- Phylogenetic origin
- ID ORTHO05D008158
- #Genes/#Species 122/92
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid C09p07080.1_BnaDAR
- single_cell_id C09p07080.1-BnaDAR
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006400 | IEA | InterPro | tRNA modification | |
| GO:0006281 | IEA | InterPro | DNA repair | |
| GO:0000719 | ISO | PLAZA Integrative Orthology | photoreactive repair | AT5G24850 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008176 | IEA | InterPro | tRNA (guanine-N7-)-methyltransferase activity | |
| GO:0003913 | IEA | InterPro | DNA photolyase activity | |
| GO:0003677 | ISO | PLAZA Integrative Orthology | DNA binding | AT5G24850 |
| GO:0010181 | ISO | PLAZA Integrative Orthology | FMN binding | AT5G24850 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G24850 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G24850 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT5G24850 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036155 | Cryptochrome/photolyase, N-terminal domain superfamily |
| IPR005101 | Cryptochrome/DNA photolyase, FAD-binding domain |
| IPR002081 | Cryptochrome/DNA photolyase class 1 |
| IPR036134 | Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily |
| IPR003358 | tRNA (guanine-N-7) methyltransferase, Trmb type |
| IPR014133 | Cryptochrome DASH |
| IPR006050 | DNA photolyase, N-terminal |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold |
| IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase |
| Mapman id | Description |
|---|---|
| 16.5.7.3.1 | RNA processing.RNA modification.tRNA methylation.TRM8-TRM82 tRNA guanosine-methyltransferase complex.component TRM8 |
| 26.1.2.1.1 | External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.cryptochrome photoreceptor (CRY) |