Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN20G0200 Fragaria x ananassa HOM05D002037 ORTHO05D005261 9.3e-249 863.2 478 100.0
FAN24G1054 Fragaria x ananassa HOM05D002037 ORTHO05D005261 3.3e-238 828.2 479 95.2
FvH4_2g30560 Fragaria vesca HOM05D002037 ORTHO05D005261 2.0e-235 818.9 479 94.8
FAN27G2203 Fragaria x ananassa HOM05D002037 ORTHO05D005261 1.6e-232 809.3 479 93.9
RcHm_v2.0_Chr6g0312521 Rosa chinensis HOM05D002037 ORTHO05D005261 1.8e-207 726.1 497 81.9
FAN20G1121 Fragaria x ananassa HOM05D002037 ORTHO05D005261 2.1e-184 649.4 476 81.5
Prupe.1G463700 Prunus persica HOM05D002037 ORTHO05D005261 2.0e-182 642.9 484 76.9
MD08G1132100 Malus domestica HOM05D002037 ORTHO05D005261 1.0e-167 594.0 505 69.3
MD15G1113300 Malus domestica HOM05D002037 ORTHO05D005261 6.4e-157 558.1 450 67.3
Haze_21662 Corylus avellana HOM05D002037 ORTHO05D005261 5.6e-145 518.5 501 60.9
Atru.chr7.2709 Acer truncatum HOM05D002037 ORTHO05D005261 1.4e-143 513.8 447 62.6
Dinv09451 Davidia involucrata HOM05D002037 ORTHO05D005261 3.1e-143 512.7 471 60.1
TWI32G0793 Tripterygium wilfordii HOM05D002037 ORTHO05D005261 5.4e-140 501.9 505 57.8
Thecc.09G001100 Theobroma cacao HOM05D002037 ORTHO05D005261 7.1e-140 501.5 458 60.5
Dinv37481 Davidia involucrata HOM05D002037 ORTHO05D005261 1.0e-138 497.7 469 59.1
TWI63G1280 Tripterygium wilfordii HOM05D002037 ORTHO05D005261 2.5e-137 493.0 506 56.9
TAR628G0359 Trochodendron aralioides HOM05D002037 ORTHO05D005261 5.6e-137 491.9 475 57.9
Manes.16G138600 Manihot esculenta HOM05D002037 ORTHO05D005261 1.2e-136 490.7 485 57.5
CSS0033264 Camellia sinensis var. sinensis HOM05D002037 ORTHO05D005261 1.6e-136 490.3 464 59.1
CiPaw.08G017100 Carya illinoinensis HOM05D002037 ORTHO05D005261 1.1e-135 487.6 501 56.5
Medtr3g108470 Medicago truncatula HOM05D002037 ORTHO05D005261 8.9e-135 484.6 456 56.4
Gohir.A08G253200 Gossypium hirsutum HOM05D002037 ORTHO05D005261 1.2e-134 484.2 455 60.2
CiPaw.07G216200 Carya illinoinensis HOM05D002037 ORTHO05D005261 1.5e-134 483.8 501 57.9
TPR.G12447 Trifolium pratense HOM05D002037 ORTHO05D005261 7.6e-134 481.5 447 56.8
Gorai.004G293400 Gossypium raimondii HOM05D002037 ORTHO05D005261 1.7e-133 480.3 455 59.8
Psat5g026040 Pisum sativum HOM05D002037 ORTHO05D005261 2.2e-133 479.9 457 57.8
Duzib187G1591 Durio zibethinus HOM05D002037 ORTHO05D005261 4.9e-133 478.8 458 58.7
Ciclev10007230m.g Citrus clementina HOM05D002037 ORTHO05D005261 6.4e-133 478.4 439 59.5
Gohir.D08G274900 Gossypium hirsutum HOM05D002037 ORTHO05D005261 4.2e-132 475.7 450 60.4
COL.COLO4_18641 Corchorus olitorius HOM05D002037 ORTHO05D005261 7.1e-132 474.9 451 58.5
Lj7A751T36 Lonicera japonica HOM05D002037 ORTHO05D005261 1.2e-131 474.2 468 57.7
QL12p030895 Quercus lobata HOM05D002037 ORTHO05D005261 2.7e-131 473.0 460 60.2
VMungo1309G2917 Vigna mungo HOM05D002037 ORTHO05D005261 7.8e-131 471.5 456 56.1
CANSAT25G0165 Cannabis sativa HOM05D002037 ORTHO05D005261 1.0e-130 471.1 444 59.9
Glyma.06G075000 Glycine max HOM05D002037 ORTHO05D005261 2.3e-130 469.9 440 56.8
Phvul.009G099700 Phaseolus vulgaris HOM05D002037 ORTHO05D005261 2.3e-130 469.9 455 55.6
Glyma.04G073900 Glycine max HOM05D002037 ORTHO05D005261 2.8e-128 463.0 471 55.0
CsaV3_3G046860 Cucumis sativus L. HOM05D002037 ORTHO05D005261 4.8e-128 462.2 459 58.0
arahy.Tifrunner.gnm1.ann1.8Q3S3N Arachis hypogaea HOM05D002037 ORTHO05D005261 4.0e-127 459.1 451 54.3
Cfa013233 Carpinus fangiana HOM05D002037 ORTHO05D005261 5.3e-127 458.8 410 62.2
ClCG05G017350 Citrullus lanatus HOM05D002037 ORTHO05D005261 5.3e-127 458.8 459 57.1
Actinidia25728 Actinidia chinensis HOM05D002037 ORTHO05D005261 2.6e-126 456.4 472 56.8
arahy.Tifrunner.gnm1.ann1.WQ4U6A Arachis hypogaea HOM05D002037 ORTHO05D005261 2.6e-126 456.4 450 54.2
Ca_15684_v3 Cicer arietinum L. HOM05D002037 ORTHO05D005261 9.9e-126 454.5 451 56.5
Lalb_Chr08g0243691 Lupinus albus HOM05D002037 ORTHO05D005261 9.9e-126 454.5 451 56.1
Potri.006G280200 Populus trichocarpa HOM05D002037 ORTHO05D005261 2.9e-125 453.0 441 57.8
Lalb_Chr11g0064041 Lupinus albus HOM05D002037 ORTHO05D005261 2.1e-123 446.8 453 54.3
Sed0009824 Sechium edule HOM05D002037 ORTHO05D005261 8.7e-122 441.4 498 55.8
Hund19377 Selenicereus undatus HOM05D002037 ORTHO05D005261 2.1e-120 436.8 467 54.4
Sed0015816 Sechium edule HOM05D002037 ORTHO05D005261 2.4e-119 433.3 460 54.6
HanXRQChr03g0082961 Helianthus annuus HOM05D002037 ORTHO05D005261 3.1e-119 433.0 439 56.3
GSVIVG01035587001 Vitis vinifera HOM05D002037 ORTHO05D005261 5.3e-119 432.2 430 57.2
Cc00_g09840 Coffea canephora HOM05D002037 ORTHO05D005261 4.5e-118 429.1 444 54.1
MELO3C003650.2 Cucumis melo HOM05D002037 ORTHO05D005261 1.3e-117 427.6 484 52.7
Lj1g0006019 Lotus japonicus HOM05D002037 ORTHO05D005261 8.4e-117 424.9 455 52.7
PGR044G2064 Punica granatum HOM05D002037 ORTHO05D005261 1.4e-116 424.1 436 55.5
Lj5g0025434 Lotus japonicus HOM05D002037 ORTHO05D005261 3.2e-116 422.9 458 52.2
Aqoxy6G00128 Aquilegia oxysepala HOM05D002037 ORTHO05D005261 2.7e-115 419.9 462 53.7
PGR044G2421 Punica granatum HOM05D002037 ORTHO05D005261 6.7e-114 415.2 436 54.8
Eucgr.C03980 Eucalyptus grandis HOM05D002037 ORTHO05D005261 1.1e-113 414.5 423 56.3
Actinidia03327 Actinidia chinensis HOM05D002037 ORTHO05D005261 9.6e-113 411.4 431 54.5
Sopen08g023030 Solanum pennellii HOM05D002037 ORTHO05D005261 2.8e-112 409.8 465 51.2
CAN.G195.8 Capsicum annuum HOM05D002037 ORTHO05D005261 2.4e-111 406.8 457 51.9
EL10Ac2g03672 Beta vulgaris HOM05D002037 ORTHO05D005261 5.3e-111 405.6 468 51.5
Migut.A00462 Erythranthe guttata HOM05D002037 ORTHO05D005261 6.9e-111 405.2 438 52.5
SGA_v2.0_scaffold193G40648 Striga asiatica HOM05D002037 ORTHO05D005261 2.0e-110 403.7 460 51.3
Lsat_1_v5_gn_5_59360 Lactuca sativa HOM05D002037 ORTHO05D005261 5.8e-110 402.1 438 54.1
Solyc08g074370.4 Solanum lycopersicum HOM05D002037 ORTHO05D005261 2.2e-109 400.2 453 51.4
Hma1.2p1_0214F.1_g090640 Hydrangea macrophylla HOM05D002037 ORTHO05D005261 8.4e-109 398.3 419 56.1
AUR62020667 Chenopodium quinoa HOM05D002037 ORTHO05D005261 2.5e-108 396.7 458 51.3
Sabra06G0217200 Salix brachista HOM05D002037 ORTHO05D005261 1.2e-107 394.4 398 57.3
Sc09g0007440 Simmondsia chinensis HOM05D002037 ORTHO05D005261 7.9e-107 391.7 459 51.4
Nn1g08375 Nelumbo nucifera HOM05D002037 ORTHO05D005261 1.0e-106 391.3 423 54.4
SalBow4G1905 Salvia bowleyana HOM05D002037 ORTHO05D005261 1.1e-105 387.9 471 48.8
ECA240G1370 Erigeron canadensis HOM05D002037 ORTHO05D005261 2.5e-105 386.7 433 52.2
MBI09_g01931_MAGBIO Magnolia biondii HOM05D002037 ORTHO05D005261 2.5e-105 386.7 524 48.7
AUR62028065 Chenopodium quinoa HOM05D002037 ORTHO05D005261 1.6e-104 384.0 458 50.4
MSTRG.25765 Avicennia marina HOM05D002037 ORTHO05D005261 1.4e-103 380.9 467 48.4
DCAR_002179 Daucus carota HOM05D002037 ORTHO05D005261 2.4e-103 380.2 464 48.9
MBI09_g40924_MAGBIO Magnolia biondii HOM05D002037 ORTHO05D005261 1.7e-101 374.0 521 47.4
SGA_v2.0_scaffold27G11691 Striga asiatica HOM05D002037 ORTHO05D005261 3.0e-98 363.2 483 46.6
vmacro05091 Vaccinium macrocarpon HOM05D002037 ORTHO05D005261 2.5e-97 360.1 406 53.9
Peaxi162Scf00213g01313 Petunia axillaris HOM05D002037 ORTHO05D005261 1.3e-96 357.8 421 53.0
HPP92_025041 Vanilla planifolia HOM05D002037 ORTHO05D005261 2.2e-96 357.1 463 47.5
THA.LOC104803581 Tarenaya hassleriana HOM05D002037 ORTHO05D005261 6.9e-95 352.1 434 49.5
THA.LOC104803889 Tarenaya hassleriana HOM05D002037 ORTHO05D005261 3.4e-94 349.7 434 47.7
PSO063G0181 Papaver somniferum HOM05D002037 ORTHO05D005261 1.7e-93 347.4 481 45.7
Rhsim07G0173400 Rhododendron simsii HOM05D002037 ORTHO05D005261 3.8e-93 346.3 394 51.0
Cpa.g.sc148.12 Carica papaya HOM05D002037 ORTHO05D005261 9.4e-92 341.7 306 60.5
PSO017G1653 Papaver somniferum HOM05D002037 ORTHO05D005261 1.6e-91 340.9 484 45.5
Lj1g0010809 Lotus japonicus HOM05D002037 ORTHO05D005261 6.1e-91 339.0 421 50.4
Thhalv10024189m.g Eutrema salsugineum HOM05D002037 ORTHO05D005261 2.0e-89 334.0 431 47.6
A03p60560 Brassica napus HOM05D002037 ORTHO05D005261 2.2e-88 330.5 434 45.9
BraA03t15097Z Brassica rapa HOM05D002037 ORTHO05D005261 3.7e-88 329.7 430 46.5
AL7G20910 Arabidopsis lyrata HOM05D002037 ORTHO05D005261 3.1e-87 326.6 420 48.8
C07p58470 Brassica napus HOM05D002037 ORTHO05D005261 4.1e-87 326.2 431 45.9
BolC7t46302H Brassica oleracea HOM05D002037 ORTHO05D005261 1.2e-86 324.7 432 45.8
BcaNung01541 Brassica carinata HOM05D002037 ORTHO05D005261 1.5e-86 324.3 420 46.9
Sp7g29040 Schrenkiella parvula HOM05D002037 ORTHO05D005261 1.7e-85 320.9 423 47.3
BolC3t21123H Brassica oleracea HOM05D002037 ORTHO05D005261 1.9e-84 317.4 437 45.8
BcaB03g12684 Brassica carinata HOM05D002037 ORTHO05D005261 2.5e-84 317.0 431 46.4
ATR0584G173 Amborella trichopoda HOM05D002037 ORTHO05D005261 4.2e-84 316.2 438 45.2
BcaC01g01107 Brassica carinata HOM05D002037 ORTHO05D005261 4.2e-84 316.2 439 45.6
C03p88150 Brassica napus HOM05D002037 ORTHO05D005261 4.2e-84 316.2 439 45.6
Aa31LG2G19150 Aethionema arabicum HOM05D002037 ORTHO05D005261 7.2e-84 315.5 439 44.9
AT4G31160 Arabidopsis thaliana HOM05D002037 ORTHO05D005261 2.1e-83 313.9 416 47.4
A08p18770 Brassica napus HOM05D002037 ORTHO05D005261 7.9e-83 312.0 439 44.9
BraA08t33838Z Brassica rapa HOM05D002037 ORTHO05D005261 7.9e-83 312.0 439 44.9
CARHR239070 Cardamine hirsuta HOM05D002037 ORTHO05D005261 1.0e-82 311.6 420 46.9
DCAR_030972 Daucus carota HOM05D002037 ORTHO05D005261 1.8e-82 310.8 488 43.0
Carub.0007s0937 Capsella rubella HOM05D002037 ORTHO05D005261 5.3e-79 299.3 431 45.2
CDE02G1944 Ceratophyllum demersum HOM05D002037 ORTHO05D005261 3.2e-76 290.0 466 40.1
CDE08G1677 Ceratophyllum demersum HOM05D002037 ORTHO05D005261 1.8e-71 274.2 478 39.1
Duzib168G1462 Durio zibethinus HOM05D002037 ORTHO05D005261 3.8e-69 266.5 290 56.2
Zm00001eb434410 Zea mays HOM05D002037 ORTHO05D005261 4.8e-64 249.6 475 37.7
SEGI_07751 Sequoiadendron giganteum HOM05D002037 ORTHO05D005261 1.2e-62 245.0 393 41.2
Zm00001eb076460 Zea mays HOM05D002037 ORTHO05D005261 4.5e-62 243.0 470 36.8
unitig_26.g8827 Utricularia gibba HOM05D002037 ORTHO05D005261 1.6e-51 208.0 462 38.1
AagrBONN_evm.TU.Sc2ySwM_117.676 Anthoceros agrestis HOM05D002037 ORTHO05D005261 3.6e-51 206.8 478 34.5
Mapoly0062s0116 Marchantia polymorpha HOM05D002037 ORTHO05D005261 6.8e-50 202.6 501 33.9
Pp3c1_12700 Physcomitrium patens HOM05D002037 ORTHO05D005261 7.5e-49 199.1 471 35.2
Pp3c1_12703 Physcomitrium patens HOM05D002037 ORTHO05D005261 7.5e-49 199.1 471 35.2
Pp3c2_24840 Physcomitrium patens HOM05D002037 ORTHO05D005261 1.2e-41 175.3 447 35.6
Oeu057143.1 Olea europaea HOM05D002037 ORTHO05D005261 5.2e-34 149.8 474 32.3
Potri.006G280600 Populus trichocarpa HOM05D003201 ORTHO05D008914 3.4e-33 147.1 206 46.6
Migut.E01409 Erythranthe guttata HOM05D002037 ORTHO05D005261 3.3e-28 130.6 215 40.0
Dinv03356 Davidia involucrata HOM05D002037 ORTHO05D005261 2.5e-20 104.4 157 42.0
Migut.E01404 Erythranthe guttata HOM05D002037 ORTHO05D005261 1.9e-15 88.2 168 32.1
Nitab4.5_0000919g0010 Nicotiana tabacum HOM05D002037 ORTHO05D021575 6.0e-14 83.2 68 55.9
Dinv42062 Davidia involucrata HOM05D000142 ORTHO05D000124 6.6e-13 79.7 59 67.8
arahy.Tifrunner.gnm1.ann1.ME62WN Arachis hypogaea HOM05D002037 ORTHO05D005261 7.3e-12 76.3 83 49.4
QL12p030705 Quercus lobata HOM05D007909 ORTHO05D021575 4.0e-10 70.5 44 72.7
Nitab4.5_0026868g0020 Nicotiana tabacum HOM05D002037 ORTHO05D005261 9.9e-09 65.9 52 55.8
Cfa014748 Carpinus fangiana HOM05D000549 ORTHO05D021575 2.9e-08 64.3 84 57.1
SEGI_24212 Sequoiadendron giganteum HOM05D002037 ORTHO05D005261 2.1e-06 58.2 70 47.1


User provided reference genes

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