Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G0186 Fragaria x ananassa HOM05D004901 ORTHO05D005592 7.8e-86 320.5 166 100.0
FAN01G2229 Fragaria x ananassa HOM05D004901 ORTHO05D005592 1.9e-23 113.2 142 52.8
FAN03G3444 Fragaria x ananassa HOM05D004901 ORTHO05D005592 3.2e-23 112.5 143 51.7
FAN06G0910 Fragaria x ananassa HOM05D004901 ORTHO05D005592 7.1e-23 111.3 144 51.4
FvH4_7g03750 Fragaria vesca HOM05D004901 ORTHO05D005592 1.0e-21 107.5 137 52.6
RcHm_v2.0_Chr7g0228881 Rosa chinensis HOM05D004901 ORTHO05D005592 2.2e-19 99.8 97 59.8
Nn5g27609 Nelumbo nucifera HOM05D004901 ORTHO05D005592 4.8e-19 98.6 154 44.8
Phvul.011G000500 Phaseolus vulgaris HOM05D004901 ORTHO05D005592 8.2e-19 97.8 134 49.3
ClCG11G008690 Citrullus lanatus HOM05D004901 ORTHO05D005592 3.1e-18 95.9 161 44.1
MD15G1404400 Malus domestica HOM05D004901 ORTHO05D005592 4.1e-18 95.5 163 41.1
arahy.Tifrunner.gnm1.ann1.CA6GZM Arachis hypogaea HOM05D004901 ORTHO05D005592 6.9e-18 94.7 144 45.1
Oeu021225.1 Olea europaea HOM05D004901 ORTHO05D005592 6.9e-18 94.7 154 42.9
arahy.Tifrunner.gnm1.ann1.0Z9JWZ Arachis hypogaea HOM05D004901 ORTHO05D005592 9.0e-18 94.4 147 44.9
Cpa.g.sc66.25 Carica papaya HOM05D004901 ORTHO05D005592 1.2e-17 94.0 159 44.0
DCAR_011526 Daucus carota HOM05D004901 ORTHO05D005592 1.5e-17 93.6 141 44.7
Gohir.D13G124700 Gossypium hirsutum HOM05D004901 ORTHO05D005592 1.5e-17 93.6 143 45.5
CANSAT56G0037 Cannabis sativa HOM05D004901 ORTHO05D005592 2.0e-17 93.2 155 41.3
CiPaw.03G019200 Carya illinoinensis HOM05D004901 ORTHO05D005592 2.0e-17 93.2 156 44.2
Ciclev10000033m.g Citrus clementina HOM05D004901 ORTHO05D005592 2.0e-17 93.2 144 44.4
Thhalv10002370m.g Eutrema salsugineum HOM05D004901 ORTHO05D005592 2.0e-17 93.2 154 43.5
Gorai.013G139300 Gossypium raimondii HOM05D004901 ORTHO05D005592 2.0e-17 93.2 144 45.1
SHI09022 Sapria himalayana HOM05D004901 ORTHO05D005592 2.0e-17 93.2 155 43.9
VMungo1127G0411 Vigna mungo HOM05D004901 ORTHO05D005592 2.6e-17 92.8 119 51.3
GSVIVG01034779001 Vitis vinifera HOM05D004901 ORTHO05D005592 2.6e-17 92.8 140 50.0
Haze_13904 Corylus avellana HOM05D004901 ORTHO05D005592 4.5e-17 92.0 157 44.6
Prupe.1G551100 Prunus persica HOM05D004901 ORTHO05D005592 4.5e-17 92.0 159 42.1
Duzib177G1004 Durio zibethinus HOM05D004901 ORTHO05D005592 7.7e-17 91.3 142 46.5
Glyma.08G238200 Glycine max HOM05D004901 ORTHO05D005592 7.7e-17 91.3 131 46.6
Sc23g0001380 Simmondsia chinensis HOM05D004901 ORTHO05D005592 1.0e-16 90.9 151 46.4
Thecc.08G186400 Theobroma cacao HOM05D004901 ORTHO05D005592 1.0e-16 90.9 154 44.8
CSS0009856 Camellia sinensis var. sinensis HOM05D004901 ORTHO05D005592 1.7e-16 90.1 169 41.4
Cfa008133 Carpinus fangiana HOM05D004901 ORTHO05D005592 1.7e-16 90.1 161 43.5
CsaV3_2G033030 Cucumis sativus L. HOM05D004901 ORTHO05D005592 1.7e-16 90.1 166 42.8
Peaxi162Scf00391g00530 Petunia axillaris HOM05D004901 ORTHO05D005592 1.7e-16 90.1 159 39.6
MELO3C008073.2 Cucumis melo HOM05D004901 ORTHO05D005592 2.2e-16 89.7 166 42.2
Carub.0001s3315 Capsella rubella HOM05D004901 ORTHO05D005592 2.9e-16 89.4 144 45.8
vmacro00754 Vaccinium macrocarpon HOM05D004901 ORTHO05D005592 2.9e-16 89.4 151 41.1
Dinv02587 Davidia involucrata HOM05D004901 ORTHO05D005592 3.8e-16 89.0 164 41.5
Psat0s1585g0040 Pisum sativum HOM05D004901 ORTHO05D005592 3.8e-16 89.0 139 45.3
Atru.chr13.2409 Acer truncatum HOM05D004901 ORTHO05D005592 5.0e-16 88.6 161 40.4
BraA05t21240Z Brassica rapa HOM05D004901 ORTHO05D005592 5.0e-16 88.6 143 45.5
Manes.18G103400 Manihot esculenta HOM05D004901 ORTHO05D005592 5.0e-16 88.6 165 40.0
Rhsim11G0056200 Rhododendron simsii HOM05D004901 ORTHO05D005592 6.5e-16 88.2 145 42.8
Aa31LG6G8790 Aethionema arabicum HOM05D004901 ORTHO05D005592 8.5e-16 87.8 169 40.2
BcaC05g27729 Brassica carinata HOM05D004901 ORTHO05D005592 8.5e-16 87.8 139 45.3
BolC5t32466H Brassica oleracea HOM05D004901 ORTHO05D005592 8.5e-16 87.8 139 45.3
PGR042G2824 Punica granatum HOM05D004901 ORTHO05D005592 8.5e-16 87.8 162 40.7
Sopen11g010870 Solanum pennellii HOM05D004901 ORTHO05D005592 1.1e-15 87.4 167 37.7
Lsat_1_v5_gn_8_141780 Lactuca sativa HOM05D004901 ORTHO05D005592 1.4e-15 87.0 162 40.1
MBI17_g38773_MAGBIO Magnolia biondii HOM05D004901 ORTHO05D005592 1.4e-15 87.0 167 39.5
Sabra13G0094500 Salix brachista HOM05D004901 ORTHO05D005592 1.4e-15 87.0 158 39.9
TAR628G1246 Trochodendron aralioides HOM05D004901 ORTHO05D005592 1.4e-15 87.0 166 41.0
A05p23720 Brassica napus HOM05D004901 ORTHO05D005592 1.9e-15 86.7 140 45.7
Potri.013G110200 Populus trichocarpa HOM05D004901 ORTHO05D005592 1.9e-15 86.7 168 38.1
C05p37130 Brassica napus HOM05D004901 ORTHO05D005592 3.2e-15 85.9 136 45.6
COL.COLO4_12801 Corchorus olitorius HOM05D004901 ORTHO05D005592 3.2e-15 85.9 159 40.9
Eucgr.F02585 Eucalyptus grandis HOM05D004901 ORTHO05D005592 4.2e-15 85.5 157 42.0
Ah.04g162840 Amaranthus hybridus HOM05D004901 ORTHO05D005592 7.2e-15 84.7 150 41.3
SalBow7G4726 Salvia bowleyana HOM05D004901 ORTHO05D005592 7.2e-15 84.7 178 38.2
Lj3g0009157 Lotus japonicus HOM05D004901 ORTHO05D005592 9.4e-15 84.3 141 42.6
Sp1g30300 Schrenkiella parvula HOM05D004901 ORTHO05D005592 9.4e-15 84.3 158 41.1
AUR62004624 Chenopodium quinoa HOM05D004901 ORTHO05D005592 1.2e-14 84.0 162 37.7
Nitab4.5_0003010g0050 Nicotiana tabacum HOM05D004901 ORTHO05D005592 1.6e-14 83.6 164 37.8
THA.LOC104816395 Tarenaya hassleriana HOM05D004901 ORTHO05D005592 1.6e-14 83.6 175 37.1
unitig_747.g21475 Utricularia gibba HOM05D004901 ORTHO05D005592 1.6e-14 83.6 142 43.7
BcaB03g13661 Brassica carinata HOM05D004901 ORTHO05D005592 2.1e-14 83.2 145 42.1
AL1G50380 Arabidopsis lyrata HOM05D004901 ORTHO05D005592 6.1e-14 81.6 162 40.1
Migut.C01287 Erythranthe guttata HOM05D004901 ORTHO05D005592 7.9e-14 81.3 182 36.8
AT1G35530 Arabidopsis thaliana HOM05D004901 ORTHO05D005592 1.4e-13 80.5 150 40.0
CAN.G259.2 Capsicum annuum HOM05D004901 ORTHO05D005592 1.4e-13 80.5 163 36.2
Thhalv10001810m.g Eutrema salsugineum HOM05D004901 ORTHO05D005592 1.4e-13 80.5 51 82.4
Medtr1g103260 Medicago truncatula HOM05D004901 ORTHO05D005592 1.8e-13 80.1 135 43.7
PSO170G4536 Papaver somniferum HOM05D004901 ORTHO05D005592 2.3e-13 79.7 176 36.9
Lalb_Chr01g0000031 Lupinus albus HOM05D004901 ORTHO05D005592 3.0e-13 79.3 116 45.7
EL10Ac1g00109 Beta vulgaris HOM05D004901 ORTHO05D005592 3.9e-13 79.0 167 37.7
Nitab4.5_0000167g0300 Nicotiana tabacum HOM05D004901 ORTHO05D005592 5.1e-13 78.6 109 48.6
PSO782G5557 Papaver somniferum HOM05D004901 ORTHO05D005592 6.7e-13 78.2 171 37.4
SGA_v2.0_scaffold24G10583 Striga asiatica HOM05D004901 ORTHO05D005592 6.7e-13 78.2 51 78.4
Gohir.A13G120700 Gossypium hirsutum HOM05D004901 ORTHO05D005592 8.8e-13 77.8 51 78.4
HPP92_004437 Vanilla planifolia HOM05D004901 ORTHO05D005592 1.1e-12 77.4 159 39.6
Aqoxy6G00145 Aquilegia oxysepala HOM05D004901 ORTHO05D005592 2.0e-12 76.6 189 33.3
AL1G60360 Arabidopsis lyrata HOM05D004901 ORTHO05D005592 2.0e-12 76.6 157 39.5
Pp3c20_9530 Physcomitrium patens HOM05D004901 ORTHO05D005592 2.0e-12 76.6 119 44.5
QL09p004928 Quercus lobata HOM05D004901 ORTHO05D005592 2.0e-12 76.6 174 37.4
TPR.G26106 Trifolium pratense HOM05D004901 ORTHO05D005592 2.0e-12 76.6 142 40.1
Hund16786 Selenicereus undatus HOM05D004901 ORTHO05D005592 3.3e-12 75.9 164 39.6
GSVIVG01012489001 Vitis vinifera HOM05D004901 ORTHO05D005592 4.3e-12 75.5 132 43.9
Sed0000511 Sechium edule HOM05D004901 ORTHO05D005592 9.7e-12 74.3 164 37.8
AagrBONN_evm.TU.Sc2ySwM_228.534 Anthoceros agrestis HOM05D004901 ORTHO05D005592 2.2e-11 73.2 146 37.0
Cc00_g06540 Coffea canephora HOM05D004901 ORTHO05D005592 2.2e-11 73.2 132 41.7
ECA233G3640 Erigeron canadensis HOM05D004901 ORTHO05D000001 2.8e-11 72.8 163 38.0
ATR0749G100 Amborella trichopoda HOM05D004901 ORTHO05D005592 6.3e-11 71.6 49 75.5
HanXRQChr17g0559191 Helianthus annuus HOM05D004901 ORTHO05D005592 8.2e-11 71.2 140 40.7
Mapoly0001s0472 Marchantia polymorpha HOM05D004901 ORTHO05D005592 6.9e-10 68.2 49 73.5
MBI17_g46833_MAGBIO Magnolia biondii HOM05D004901 ORTHO05D005592 2.6e-09 66.2 38 86.8
Zm00001eb384980 Zea mays HOM05D004901 ORTHO05D005592 4.5e-09 65.5 51 62.7
Os11g0180600 Oryza sativa ssp. japonica HOM05D004901 ORTHO05D005592 1.7e-08 63.5 51 64.7
Zm00001eb201140 Zea mays HOM05D004901 ORTHO05D005592 2.9e-08 62.8 51 62.7
CDE04G3479 Ceratophyllum demersum HOM05D004901 ORTHO05D005592 3.8e-08 62.4 37 81.1
Haze_26138 Corylus avellana HOM05D004901 ORTHO05D005592 1.4e-07 60.5 41 68.3
Cre03.g208833 Chlamydomonas reinhardtii HOM05D004901 ORTHO05D005592 3.2e-07 59.3 43 62.8
MCO11G659 Micromonas commoda HOM05D004901 ORTHO05D005592 4.2e-07 58.9 78 43.6
PRCOL_00002915 Prasinoderma coloniale HOM05D004901 ORTHO05D005592 1.6e-06 57.0 45 53.3


User provided reference genes

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