Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G3244 Fragaria x ananassa HOM05D000936 ORTHO05D005107 1.2e-61 240.0 152 100.0
FAN25G3358 Fragaria x ananassa HOM05D000936 ORTHO05D005107 5.9e-56 221.1 147 78.9
FAN11G0860 Fragaria x ananassa HOM05D000936 ORTHO05D005107 3.0e-52 208.8 143 93.0
FvH4_3g13622 Fragaria vesca HOM05D000936 ORTHO05D005107 1.5e-51 206.5 143 93.0
RcHm_v2.0_Chr5g0022531 Rosa chinensis HOM05D000936 ORTHO05D005107 5.5e-38 161.4 153 79.1
FAN11G1021 Fragaria x ananassa HOM05D000936 ORTHO05D005107 4.7e-29 131.7 67 94.0
FAN11G3698 Fragaria x ananassa HOM05D000071 ORTHO05D000029 8.8e-28 127.5 65 95.4
SEGI_28941 Sequoiadendron giganteum HOM05D000936 ORTHO05D005107 2.4e-25 119.4 67 82.1
AagrBONN_evm.TU.Sc2ySwM_344.1171 Anthoceros agrestis HOM05D000936 ORTHO05D005107 7.0e-25 117.9 67 82.1
ATR1136G108 Amborella trichopoda HOM05D000936 ORTHO05D005107 3.5e-24 115.5 67 79.1
Medtr2g062790 Medicago truncatula HOM05D000936 ORTHO05D005107 4.5e-24 115.2 67 82.1
MD10G1220200 Malus domestica HOM05D000936 ORTHO05D005107 1.3e-23 113.6 68 80.9
Manes.03G076150 Manihot esculenta HOM05D000936 ORTHO05D005107 2.2e-23 112.8 65 81.5
CANSAT56G3090 Cannabis sativa HOM05D000936 ORTHO05D005107 2.9e-23 112.5 67 79.1
vmacro09758 Vaccinium macrocarpon HOM05D000936 ORTHO05D005107 2.9e-23 112.5 74 75.7
Psat1g131040 Pisum sativum HOM05D000936 ORTHO05D005107 5.0e-23 111.7 63 82.5
TPR.G3637 Trifolium pratense HOM05D000936 ORTHO05D005107 5.0e-23 111.7 65 81.5
Hma1.2p1_1417F.1_g282200 Hydrangea macrophylla HOM05D000936 ORTHO05D005107 6.5e-23 111.3 67 77.6
Rhsim04G0003900 Rhododendron simsii HOM05D000936 ORTHO05D005107 6.5e-23 111.3 67 77.6
Ca_03315_v3 Cicer arietinum L. HOM05D000936 ORTHO05D005107 8.5e-23 110.9 63 81.0
Lalb_Chr25g0284041 Lupinus albus HOM05D000936 ORTHO05D005107 8.5e-23 110.9 60 86.7
Nn7g38429 Nelumbo nucifera HOM05D000936 ORTHO05D005107 1.1e-22 110.5 65 80.0
Pp3c6_11470 Physcomitrium patens HOM05D000936 ORTHO05D005107 1.1e-22 110.5 67 77.6
ClCG02G018890 Citrullus lanatus HOM05D000936 ORTHO05D005107 1.5e-22 110.2 67 77.6
Lj3g0022291 Lotus japonicus HOM05D000936 ORTHO05D005107 1.5e-22 110.2 63 81.0
PSO541G4061 Papaver somniferum HOM05D000936 ORTHO05D005107 1.9e-22 109.8 65 76.9
PSO675G2338 Papaver somniferum HOM05D000936 ORTHO05D005107 1.9e-22 109.8 65 76.9
TAR624G0750 Trochodendron aralioides HOM05D000936 ORTHO05D005107 1.9e-22 109.8 65 80.0
Peaxi162Scf00006g02411 Petunia axillaris HOM05D000936 ORTHO05D005107 2.5e-22 109.4 66 75.8
Gohir.A01G023000 Gossypium hirsutum HOM05D000936 ORTHO05D005107 3.2e-22 109.0 66 77.3
Gohir.D01G021000 Gossypium hirsutum HOM05D000936 ORTHO05D005107 3.2e-22 109.0 66 77.3
Gorai.002G023500 Gossypium raimondii HOM05D000936 ORTHO05D005107 3.2e-22 109.0 66 77.3
Phvul.005G044400 Phaseolus vulgaris HOM05D000936 ORTHO05D005107 3.2e-22 109.0 65 78.5
Pp3c5_21800 Physcomitrium patens HOM05D000936 ORTHO05D005107 3.2e-22 109.0 67 77.6
Thecc.07G192500 Theobroma cacao HOM05D000936 ORTHO05D005107 3.2e-22 109.0 66 77.3
DCAR_016855 Daucus carota HOM05D000936 ORTHO05D005107 4.2e-22 108.6 68 76.5
Nitab4.5_0000388g0010 Nicotiana tabacum HOM05D000936 ORTHO05D005107 4.2e-22 108.6 67 74.6
Nitab4.5_0001995g0030 Nicotiana tabacum HOM05D000936 ORTHO05D005107 4.2e-22 108.6 67 74.6
Sed0019803 Sechium edule HOM05D000936 ORTHO05D005107 4.2e-22 108.6 67 77.6
PGSC0003DMG401009662 Solanum tuberosum HOM05D000936 ORTHO05D005107 4.2e-22 108.6 66 75.8
Lj8A190G37 Lonicera japonica HOM05D000936 ORTHO05D005107 5.5e-22 108.2 64 78.1
CAN.G67.4 Capsicum annuum HOM05D000936 ORTHO05D005107 7.2e-22 107.8 67 73.1
Glyma.08G160900 Glycine max HOM05D000936 ORTHO05D005107 1.2e-21 107.1 65 76.9
CSS0044630 Camellia sinensis var. sinensis HOM05D000936 ORTHO05D005107 1.6e-21 106.7 67 73.1
CsaV3_6G013300 Cucumis sativus L. HOM05D000936 ORTHO05D005107 1.6e-21 106.7 67 76.1
Aqoxy1G01341 Aquilegia oxysepala HOM05D000936 ORTHO05D005107 2.1e-21 106.3 69 76.8
Mapoly0094s0070 Marchantia polymorpha HOM05D000936 ORTHO05D005107 2.1e-21 106.3 67 73.1
Solyc12g017420.2 Solanum lycopersicum HOM05D000936 ORTHO05D005107 2.1e-21 106.3 64 76.6
Actinidia03634 Actinidia chinensis HOM05D000936 ORTHO05D005107 2.8e-21 105.9 67 73.1
GSVIVG01036685001 Vitis vinifera HOM05D000936 ORTHO05D005107 2.8e-21 105.9 65 75.4
Duzib251G0327 Durio zibethinus HOM05D000936 ORTHO05D005107 3.6e-21 105.5 66 75.8
Os01g0218700 Oryza sativa ssp. japonica HOM05D000936 ORTHO05D005107 3.6e-21 105.5 67 74.6
ECA236G1665 Erigeron canadensis HOM05D000936 ORTHO05D005107 4.7e-21 105.1 64 78.1
HanXRQChr11g0335891 Helianthus annuus HOM05D000936 ORTHO05D005107 4.7e-21 105.1 64 78.1
QL04p096609 Quercus lobata HOM05D000936 ORTHO05D005107 6.1e-21 104.8 65 78.5
CDE04G1459 Ceratophyllum demersum HOM05D000936 ORTHO05D005107 8.0e-21 104.4 67 68.7
Lsat_1_v5_gn_7_111041 Lactuca sativa HOM05D000936 ORTHO05D005107 1.0e-20 104.0 64 76.6
Psat3g106000 Pisum sativum HOM05D000936 ORTHO05D005107 1.0e-20 104.0 61 82.0
Cfa017781 Carpinus fangiana HOM05D000936 ORTHO05D005107 1.8e-20 103.2 64 79.7
TWI59G0187 Tripterygium wilfordii HOM05D000936 ORTHO05D005107 1.8e-20 103.2 65 72.3
unitig_32.g11069 Utricularia gibba HOM05D000936 ORTHO05D005107 1.8e-20 103.2 64 75.0
Ciclev10004357m.g Citrus clementina HOM05D000936 ORTHO05D005107 2.3e-20 102.8 60 80.0
Haze_18446 Corylus avellana HOM05D000936 ORTHO05D005107 2.3e-20 102.8 64 79.7
Zm00001eb338660 Zea mays HOM05D000936 ORTHO05D005107 2.3e-20 102.8 67 70.1
Migut.H01645 Erythranthe guttata HOM05D000936 ORTHO05D005107 4.0e-20 102.1 67 71.6
Psat3g193720 Pisum sativum HOM05D000936 ORTHO05D005107 4.0e-20 102.1 61 80.3
Hund03214 Selenicereus undatus HOM05D000936 ORTHO05D005107 4.0e-20 102.1 64 75.0
Lalb_Chr01g0015671 Lupinus albus HOM05D000936 ORTHO05D005107 5.2e-20 101.7 60 78.3
MD10G1220300 Malus domestica HOM05D000936 ORTHO05D005107 5.2e-20 101.7 67 73.1
SMO117G0099 Selaginella moellendorffii HOM05D000936 ORTHO05D005107 6.8e-20 101.3 61 82.0
BcaC09g50320 Brassica carinata HOM05D000936 ORTHO05D005107 3.4e-19 99.0 63 71.4
BolC1t02608H Brassica oleracea HOM05D000936 ORTHO05D005107 3.4e-19 99.0 63 71.4
Potri.010G176400 Populus trichocarpa HOM05D000936 ORTHO05D005107 3.4e-19 99.0 65 72.3
SalBow8G2375 Salvia bowleyana HOM05D000936 ORTHO05D005107 4.4e-19 98.6 67 68.7
HanXRQChr07g0190671 Helianthus annuus HOM05D000936 ORTHO05D005107 5.7e-19 98.2 64 71.9
Aa31sc115G70 Aethionema arabicum HOM05D000936 ORTHO05D005107 7.5e-19 97.8 63 69.8
Cc00_g09060 Coffea canephora HOM05D000936 ORTHO05D005107 7.5e-19 97.8 60 81.7
Eucgr.F04488 Eucalyptus grandis HOM05D000936 ORTHO05D005107 7.5e-19 97.8 67 68.7
Sc02g0002940 Simmondsia chinensis HOM05D000936 ORTHO05D005107 7.5e-19 97.8 67 65.7
Oeu017915.1 Olea europaea HOM05D000936 ORTHO05D005107 9.8e-19 97.4 66 69.7
THA.LOC104815715 Tarenaya hassleriana HOM05D000936 ORTHO05D005107 9.8e-19 97.4 58 75.9
EL10Ac2g03607 Beta vulgaris HOM05D000936 ORTHO05D005107 1.3e-18 97.1 64 71.9
PGR042G2500 Punica granatum HOM05D000936 ORTHO05D005107 1.3e-18 97.1 67 67.2
Sabra10G0135700 Salix brachista HOM05D000936 ORTHO05D001411 1.3e-18 97.1 65 70.8
A01p21320 Brassica napus HOM05D000936 ORTHO05D005107 1.7e-18 96.7 63 69.8
C01p26670 Brassica napus HOM05D000936 ORTHO05D005107 1.7e-18 96.7 63 69.8
BraA01t02039Z Brassica rapa HOM05D000936 ORTHO05D005107 1.7e-18 96.7 63 69.8
BcaB07g33040 Brassica carinata HOM05D000936 ORTHO05D005107 2.2e-18 96.3 63 69.8
Thhalv10011270m.g Eutrema salsugineum HOM05D000936 ORTHO05D005107 2.2e-18 96.3 63 69.8
Sp1g41890 Schrenkiella parvula HOM05D000936 ORTHO05D005107 2.2e-18 96.3 63 69.8
CARHR046020 Cardamine hirsuta HOM05D000936 ORTHO05D005107 2.8e-18 95.9 63 68.3
COL.COLO4_32277 Corchorus olitorius HOM05D000936 ORTHO05D005107 3.7e-18 95.5 58 81.0
HPP92_026769 Vanilla planifolia HOM05D000936 ORTHO05D005107 1.4e-17 93.6 57 71.9
AL1G64570 Arabidopsis lyrata HOM05D000936 ORTHO05D005107 2.4e-17 92.8 63 66.7
AT1G54350 Arabidopsis thaliana HOM05D000936 ORTHO05D005107 2.4e-17 92.8 63 66.7
Carub.0001s4482 Capsella rubella HOM05D000936 ORTHO05D005107 2.4e-17 92.8 63 66.7
AUR62020749 Chenopodium quinoa HOM05D000936 ORTHO05D005107 2.4e-17 92.8 64 70.3
CBR_g26492 Chara braunii HOM05D000936 ORTHO05D005107 3.1e-17 92.4 67 64.2
SGA_v2.0_scaffold239G43992 Striga asiatica HOM05D000936 ORTHO05D005107 4.1e-17 92.0 64 65.6
ECA232G0034 Erigeron canadensis HOM05D000936 ORTHO05D005107 7.0e-17 91.3 57 78.9
AUR62027964 Chenopodium quinoa HOM05D000936 ORTHO05D005107 1.2e-16 90.5 64 68.8
CBR_g26493 Chara braunii HOM05D000936 ORTHO05D005107 1.1e-14 84.0 57 70.2
arahy.Tifrunner.gnm1.ann1.LF646F Arachis hypogaea HOM05D000936 ORTHO05D005107 2.1e-13 79.7 43 86.0
Mapoly0025s0137 Marchantia polymorpha HOM05D000936 ORTHO05D005107 4.0e-12 75.5 65 53.8
CiPaw.16G078800 Carya illinoinensis HOM05D000936 ORTHO05D005107 1.2e-11 73.9 51 74.5
SMO268G0012 Selaginella moellendorffii HOM05D000936 ORTHO05D005107 4.9e-10 68.6 63 55.6
FvH4_3g13563 Fragaria vesca HOM05D000936 ORTHO05D005107 8.3e-10 67.8 34 91.2
SMO174G0196 Selaginella moellendorffii HOM05D000936 ORTHO05D005107 1.1e-09 67.4 63 55.6
SMO296G0002 Selaginella moellendorffii HOM05D000936 ORTHO05D005107 1.1e-09 67.4 63 55.6
PRCOL_00001508 Prasinoderma coloniale HOM05D000936 ORTHO05D005107 1.4e-09 67.0 61 57.4
SMO268G0022 Selaginella moellendorffii HOM05D000936 ORTHO05D005107 1.8e-09 66.6 63 54.0
RcHm_v2.0_Chr5g0022571 Rosa chinensis HOM05D000936 ORTHO05D005107 7.0e-09 64.7 32 96.9
Cre10.g439000 Chlamydomonas reinhardtii HOM05D000936 ORTHO05D005107 2.7e-08 62.8 68 47.1
MD10G1219800 Malus domestica HOM05D000936 ORTHO05D005107 4.6e-08 62.0 34 82.4
Prupe.4G123900 Prunus persica HOM05D000936 ORTHO05D005107 1.0e-07 60.8 34 85.3
CSS0019150 Camellia sinensis var. sinensis HOM05D000936 ORTHO05D005107 5.0e-07 58.5 42 66.7
QL04p096516 Quercus lobata HOM05D000005 ORTHO05D000012 1.5e-06 57.0 48 58.3
MD10G1219900 Malus domestica HOM05D000936 ORTHO05D005107 1.9e-06 56.6 35 77.1


User provided reference genes

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