Gene: Solyc12g017420.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g017420.2
  • Transcript Identifier Solyc12g017420.2.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 6720859-6730192 : positive

Gene Family Information

  • ID HOM05D000936
  • #Genes/#Species 645/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g017420.2.1
  • uniprot A0A3Q7J6E4
  • gene_id Solyc12g017420

Descriptions

  • Description ABC transporter-like (AHRD V3.3 *** A0A200R0Y3_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006221
ISO
PLAZA Homology (enrichment)pyrimidine nucleotide biosynthetic process HOM05D000936
GO:0006241
ISO
PLAZA Homology (enrichment)CTP biosynthetic process HOM05D000936
GO:0015910
IBA
GOA Databaselong-chain fatty acid import into peroxisome
GO:0007031
IBA
GOA Databaseperoxisome organization
GO:0006635
IBA
GOA Databasefatty acid beta-oxidation
GO:0042760
IBA
GOA Databasevery long-chain fatty acid catabolic process
GO:0055085
IEA
GOA Databasetransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003883
ISO
PLAZA Homology (enrichment)CTP synthase activity HOM05D000936
GO:0005324
IBA
GOA Databaselong-chain fatty acid transporter activity
GO:0005524
IBA
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0042626
IBA
GOA DatabaseATPase-coupled transmembrane transporter activity
GO:0140359
IEA
GOA DatabaseABC-type transporter activity
GO:0140359
IEA
InterProABC-type transporter activity
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005778
IBA
GOA Databaseperoxisomal membrane
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G54350
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011527 ABC transporter type 1, transmembrane domain
IPR036640 ABC transporter type 1, transmembrane domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003593 AAA+ ATPase domain
IPR003439 ABC transporter-like, ATP-binding domain
Mapman id Description
24.1.3.1.3 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter