Gene: COL.COLO4_32277

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_32277
  • Transcript Identifier COL.rna30990
  • Gene Type Coding gene
  • Location AWUE01021090.1 : 5508-9832 : positive

Gene Family Information

  • ID HOM05D000936
  • #Genes/#Species 645/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna30990
  • GenBank OMO63630.1
  • id gene32249
  • gene_name COLO4_32277
  • uniprot A0A1R3H059

Descriptions

  • Description ABC transporter-like protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055085
IEA
GOA Databasetransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0006241
ISO
PLAZA Homology (enrichment)CTP biosynthetic process HOM05D000936
GO:0006221
ISO
PLAZA Homology (enrichment)pyrimidine nucleotide biosynthetic process HOM05D000936

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0140359
IEA
GOA DatabaseABC-type transporter activity
GO:0140359
IEA
InterProABC-type transporter activity
GO:0003883
ISO
PLAZA Homology (enrichment)CTP synthase activity HOM05D000936

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G54350

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003593 AAA+ ATPase domain
IPR011527 ABC transporter type 1, transmembrane domain
IPR036640 ABC transporter type 1, transmembrane domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003439 ABC transporter-like, ATP-binding domain
Mapman id Description
24.1.3.1.3 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter