Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G0965 Fragaria x ananassa HOM05D000882 ORTHO05D035585 2.5e-89 332.0 164 100.0
FAN14G1256 Fragaria x ananassa HOM05D000882 ORTHO05D035585 2.6e-86 322.0 164 97.6
FAN09G0602 Fragaria x ananassa HOM05D000882 ORTHO05D029557 5.5e-52 208.0 134 79.9
FvH4_6g12031 Fragaria vesca HOM05D000882 ORTHO05D035585 5.4e-47 191.4 122 81.1
RcHm_v2.0_Chr3g0463881 Rosa chinensis HOM05D000882 ORTHO05D029557 1.3e-45 186.8 171 59.6
FAN02G3523 Fragaria x ananassa HOM05D000882 ORTHO05D208266 1.8e-42 176.4 119 79.0
FAN17G0306 Fragaria x ananassa HOM05D000882 ORTHO05D029557 9.8e-41 170.6 171 57.9
FvH4_4g02680 Fragaria vesca HOM05D000882 ORTHO05D029557 2.9e-40 169.1 171 57.3
RcHm_v2.0_Chr7g0189951 Rosa chinensis HOM05D000882 ORTHO05D001142 2.8e-19 99.4 187 36.4
RcHm_v2.0_Chr7g0189961 Rosa chinensis HOM05D000882 ORTHO05D001142 9.2e-15 84.3 162 34.6
FvH4_1g01060 Fragaria vesca HOM05D000882 ORTHO05D001142 1.1e-10 70.9 170 37.1
Sed0011489 Sechium edule HOM05D000882 ORTHO05D001142 1.1e-10 70.9 102 42.2
Lalb_Chr08g0234101 Lupinus albus HOM05D000882 ORTHO05D001142 1.8e-10 70.1 168 33.3
Prupe.7G261400 Prunus persica HOM05D000882 ORTHO05D001142 2.4e-10 69.7 172 36.0
RcHm_v2.0_Chr7g0189941 Rosa chinensis HOM05D000882 ORTHO05D001142 2.4e-10 69.7 153 33.3
Dinv42867 Davidia involucrata HOM05D000882 ORTHO05D001142 6.9e-10 68.2 172 35.5
Dinv43233 Davidia involucrata HOM05D000882 ORTHO05D001142 6.9e-10 68.2 172 35.5
FAN13G1030 Fragaria x ananassa HOM05D000882 ORTHO05D001142 9.0e-10 67.8 156 34.6
MD09G1131300 Malus domestica HOM05D000882 ORTHO05D001142 9.0e-10 67.8 102 40.2
Rhsim01G0035300 Rhododendron simsii HOM05D000882 ORTHO05D001142 9.0e-10 67.8 173 35.8
Cfa019391 Carpinus fangiana HOM05D000882 ORTHO05D001142 1.2e-09 67.4 102 43.1
Thecc.09G188000 Theobroma cacao HOM05D000882 ORTHO05D001142 1.2e-09 67.4 172 34.3
RcHm_v2.0_Chr2g0085821 Rosa chinensis HOM05D000882 ORTHO05D001142 1.5e-09 67.0 170 35.3
Sed0007584 Sechium edule HOM05D000882 ORTHO05D001142 1.5e-09 67.0 102 40.2
ClCG08G000930 Citrullus lanatus HOM05D000882 ORTHO05D001142 2.0e-09 66.6 102 40.2
Manes.08G068000 Manihot esculenta HOM05D000882 ORTHO05D001142 2.0e-09 66.6 172 33.1
FAN18G1701 Fragaria x ananassa HOM05D000882 ORTHO05D001142 3.4e-09 65.9 171 29.2
Carub.0008s1854 Capsella rubella HOM05D000882 ORTHO05D001142 4.4e-09 65.5 172 33.1
CiPaw.15G175300 Carya illinoinensis HOM05D000882 ORTHO05D001142 4.4e-09 65.5 103 39.8
CiPaw.16G114000 Carya illinoinensis HOM05D000882 ORTHO05D001142 5.8e-09 65.1 172 32.0
Hma1.2p1_0028F.1_g017460 Hydrangea macrophylla HOM05D000882 ORTHO05D001142 5.8e-09 65.1 102 44.1
Rhsim01G0036300 Rhododendron simsii HOM05D000882 ORTHO05D001142 5.8e-09 65.1 152 37.5
AT5G58003 Arabidopsis thaliana HOM05D000882 ORTHO05D001142 7.6e-09 64.7 172 34.3
arahy.Tifrunner.gnm1.ann1.WR01F1 Arachis hypogaea HOM05D000882 ORTHO05D001142 7.6e-09 64.7 168 32.1
FvH4_5g08470 Fragaria vesca HOM05D000882 ORTHO05D001142 9.9e-09 64.3 171 28.7
SGA_v2.0_scaffold549G52858 Striga asiatica HOM05D000882 ORTHO05D001142 9.9e-09 64.3 172 32.6
Actinidia38334 Actinidia chinensis HOM05D000882 ORTHO05D001142 1.3e-08 63.9 172 34.3
arahy.Tifrunner.gnm1.ann1.SC0NT9 Arachis hypogaea HOM05D000882 ORTHO05D001142 1.3e-08 63.9 168 32.1
Migut.B00998 Erythranthe guttata HOM05D000882 ORTHO05D001142 1.3e-08 63.9 172 30.8
FvH4_7g08260 Fragaria vesca HOM05D000882 ORTHO05D001142 1.3e-08 63.9 169 33.7
FAN08G0259 Fragaria x ananassa HOM05D000882 ORTHO05D001142 1.3e-08 63.9 171 29.2
Manes.06G019000 Manihot esculenta HOM05D000882 ORTHO05D001142 1.3e-08 63.9 102 40.2
Peaxi162Scf00594g00525 Petunia axillaris HOM05D000882 ORTHO05D001142 1.3e-08 63.9 150 34.0
AL8G34090 Arabidopsis lyrata HOM05D000882 ORTHO05D001142 1.7e-08 63.5 172 34.3
arahy.Tifrunner.gnm1.ann1.IVS2PB Arachis hypogaea HOM05D000882 ORTHO05D001142 1.7e-08 63.5 168 31.5
Glyma.02G203000 Glycine max HOM05D000882 ORTHO05D001142 1.7e-08 63.5 168 32.7
Phvul.005G040600 Phaseolus vulgaris HOM05D000882 ORTHO05D001142 1.7e-08 63.5 168 32.1
RcHm_v2.0_Chr6g0257451 Rosa chinensis HOM05D000882 ORTHO05D001142 1.7e-08 63.5 175 34.3
Atru.chr7.97 Acer truncatum HOM05D000882 ORTHO05D001142 2.2e-08 63.2 170 32.9
PGR102G0086 Punica granatum HOM05D000882 ORTHO05D001142 2.9e-08 62.8 172 32.0
TWI32G1214 Tripterygium wilfordii HOM05D000882 ORTHO05D001142 2.9e-08 62.8 172 31.4
Haze_19222 Corylus avellana HOM05D000882 ORTHO05D001142 3.8e-08 62.4 110 40.0
RcHm_v2.0_Chr6g0256111 Rosa chinensis HOM05D000882 ORTHO05D001142 3.8e-08 62.4 174 33.3
GSVIVG01002283001 Vitis vinifera HOM05D005230 ORTHO05D006506 3.8e-08 62.4 102 40.2
Glyma.17G074700 Glycine max HOM05D000882 ORTHO05D001142 4.9e-08 62.0 168 31.5
RcHm_v2.0_Chr4g0392421 Rosa chinensis HOM05D000882 ORTHO05D001142 4.9e-08 62.0 174 33.9
RcHm_v2.0_Chr6g0254001 Rosa chinensis HOM05D000882 ORTHO05D001142 4.9e-08 62.0 170 30.6
THA.LOC104816771 Tarenaya hassleriana HOM05D000882 ORTHO05D001142 4.9e-08 62.0 172 32.6
GSVIVG01006782001 Vitis vinifera HOM05D000882 ORTHO05D001142 4.9e-08 62.0 172 32.0
Actinidia04291 Actinidia chinensis HOM05D000882 ORTHO05D001142 6.4e-08 61.6 172 33.1
CsaV3_5G040120 Cucumis sativus L. HOM05D000882 ORTHO05D001142 6.4e-08 61.6 102 38.2
TWI63G1431 Tripterygium wilfordii HOM05D000882 ORTHO05D001142 6.4e-08 61.6 173 30.1
CAN.G1424.9 Capsicum annuum HOM05D000882 ORTHO05D001142 8.4e-08 61.2 102 40.2
COL.COLO4_28864 Corchorus olitorius HOM05D000882 ORTHO05D001142 8.4e-08 61.2 170 32.4
Gohir.A02G012100 Gossypium hirsutum HOM05D000882 ORTHO05D001142 8.4e-08 61.2 172 32.6
Nitab4.5_0006527g0010 Nicotiana tabacum HOM05D000882 ORTHO05D001142 8.4e-08 61.2 172 32.0
MELO3C022188.2 Cucumis melo HOM05D000882 ORTHO05D001142 1.1e-07 60.8 102 38.2
FvH4_7g07841 Fragaria vesca HOM05D000882 ORTHO05D001142 1.1e-07 60.8 169 33.7
Lsat_1_v5_gn_4_18440 Lactuca sativa HOM05D000882 ORTHO05D001142 1.1e-07 60.8 149 36.9
TAR626G1907 Trochodendron aralioides HOM05D000882 ORTHO05D001142 1.1e-07 60.8 170 33.5
EL10Ac2g02952 Beta vulgaris HOM05D000882 ORTHO05D001142 1.4e-07 60.5 152 34.9
Solyc07g005450.3 Solanum lycopersicum HOM05D000882 ORTHO05D001142 1.4e-07 60.5 102 40.2
Solyc07g005460.4 Solanum lycopersicum HOM05D000882 ORTHO05D001142 1.4e-07 60.5 102 40.2
Sopen07g001340 Solanum pennellii HOM05D000882 ORTHO05D001142 1.4e-07 60.5 102 40.2
VMungo1080G1773 Vigna mungo HOM05D000882 ORTHO05D001142 1.4e-07 60.5 147 34.0
VMungo1215G1818 Vigna mungo HOM05D000882 ORTHO05D001142 1.9e-07 60.1 169 31.4
CSS0011921 Camellia sinensis var. sinensis HOM05D000882 ORTHO05D001142 2.4e-07 59.7 172 33.7
ECA234G2782 Erigeron canadensis HOM05D000882 ORTHO05D001142 2.4e-07 59.7 173 32.9
Migut.M00493 Erythranthe guttata HOM05D000882 ORTHO05D001142 2.4e-07 59.7 150 32.7
Lj4g0027533 Lotus japonicus HOM05D000882 ORTHO05D001142 2.4e-07 59.7 168 32.1
THA.LOC104816865 Tarenaya hassleriana HOM05D000882 ORTHO05D001142 2.4e-07 59.7 172 32.0
Duzib150G0034 Durio zibethinus HOM05D000882 ORTHO05D001142 3.2e-07 59.3 102 37.3
Lj8A601G12 Lonicera japonica HOM05D000882 ORTHO05D001142 3.2e-07 59.3 148 35.8
RcHm_v2.0_Chr6g0276921 Rosa chinensis HOM05D000882 ORTHO05D001142 3.2e-07 59.3 175 32.6
Sopen07g001330 Solanum pennellii HOM05D000882 ORTHO05D001142 3.2e-07 59.3 102 39.2
Aa31LG3G13800 Aethionema arabicum HOM05D000882 ORTHO05D001142 4.2e-07 58.9 172 30.8
BraA03t10560Z Brassica rapa HOM05D000882 ORTHO05D001142 4.2e-07 58.9 172 32.6
Cpa.g.sc26.260 Carica papaya HOM05D000882 ORTHO05D001142 4.2e-07 58.9 85 40.0
AUR62042619 Chenopodium quinoa HOM05D000882 ORTHO05D001142 4.2e-07 58.9 172 32.6
Gohir.A02G012000 Gossypium hirsutum HOM05D000882 ORTHO05D001142 4.2e-07 58.9 102 39.2
Phvul.003G156800 Phaseolus vulgaris HOM05D000882 ORTHO05D001142 4.2e-07 58.9 168 31.0
RcHm_v2.0_Chr6g0256301 Rosa chinensis HOM05D000882 ORTHO05D001142 4.2e-07 58.9 174 32.8
Ca_21118_v3 Cicer arietinum L. HOM05D000882 ORTHO05D001142 5.4e-07 58.5 168 31.5
Gorai.005G016300 Gossypium raimondii HOM05D000882 ORTHO05D001142 5.4e-07 58.5 172 31.4
Potri.018G108300 Populus trichocarpa HOM05D000882 ORTHO05D001142 5.4e-07 58.5 102 38.2
TPR.G39212 Trifolium pratense HOM05D000882 ORTHO05D001142 5.4e-07 58.5 168 32.7
MSTRG.26284 Avicennia marina HOM05D000882 ORTHO05D001142 7.1e-07 58.2 102 39.2
AUR62016253 Chenopodium quinoa HOM05D000882 ORTHO05D001142 7.1e-07 58.2 172 30.8
Lj8C602G10 Lonicera japonica HOM05D000882 ORTHO05D001142 9.3e-07 57.8 97 41.2
SHI02814 Sapria himalayana HOM05D000882 ORTHO05D001142 9.3e-07 57.8 151 33.1
BcaNung07255 Brassica carinata HOM05D000882 ORTHO05D001142 1.2e-06 57.4 130 36.9
A03p12450 Brassica napus HOM05D000882 ORTHO05D001142 1.2e-06 57.4 172 32.0
C03p14660 Brassica napus HOM05D000882 ORTHO05D001142 1.2e-06 57.4 172 32.0
Medtr4g121140 Medicago truncatula HOM05D000882 ORTHO05D001142 1.2e-06 57.4 168 32.1
RcHm_v2.0_Chr1g0324741 Rosa chinensis HOM05D000882 ORTHO05D001142 1.2e-06 57.4 175 32.6
AUR62014762 Chenopodium quinoa HOM05D000882 ORTHO05D001142 1.6e-06 57.0 146 32.9
Lalb_Chr13g0300911 Lupinus albus HOM05D000882 ORTHO05D001142 1.6e-06 57.0 147 32.0
Nn2g12339 Nelumbo nucifera HOM05D000882 ORTHO05D001142 1.6e-06 57.0 102 38.2
GSVIVG01031985001 Vitis vinifera HOM05D000882 ORTHO05D001142 1.6e-06 57.0 101 37.6
CARHR271800 Cardamine hirsuta HOM05D000882 ORTHO05D001142 2.1e-06 56.6 173 31.8
Dinv41388 Davidia involucrata HOM05D000882 ORTHO05D001142 2.1e-06 56.6 84 42.9
BolC3t13907H Brassica oleracea HOM05D000882 ORTHO05D001142 2.7e-06 56.2 172 31.4
COL.COLO4_27950 Corchorus olitorius HOM05D000882 ORTHO05D001142 2.7e-06 56.2 172 33.1
Duzib151G0910 Durio zibethinus HOM05D000882 ORTHO05D001142 2.7e-06 56.2 102 36.3
RcHm_v2.0_Chr6g0267911 Rosa chinensis HOM05D000882 ORTHO05D001142 2.7e-06 56.2 173 31.2
Hund22296 Selenicereus undatus HOM05D000882 ORTHO05D001142 2.7e-06 56.2 102 39.2
BcaB01g04470 Brassica carinata HOM05D000882 ORTHO05D001142 3.5e-06 55.8 172 31.4
Gohir.D02G012800 Gossypium hirsutum HOM05D000882 ORTHO05D001142 3.5e-06 55.8 85 38.8
Sp6g19670 Schrenkiella parvula HOM05D000882 ORTHO05D001142 3.5e-06 55.8 172 32.0
Sc02g0006320 Simmondsia chinensis HOM05D000882 ORTHO05D001142 3.5e-06 55.8 172 31.4
arahy.Tifrunner.gnm1.ann1.GHMM2H Arachis hypogaea HOM05D000882 ORTHO05D001142 6.0e-06 55.1 84 38.1
Psat4g009280 Pisum sativum HOM05D000882 ORTHO05D001142 6.0e-06 55.1 168 30.4
Hund22135 Selenicereus undatus HOM05D000882 ORTHO05D001142 6.0e-06 55.1 102 38.2
Eucgr.C02587 Eucalyptus grandis HOM05D000882 ORTHO05D001142 7.8e-06 54.7 169 30.2
Thhalv10013455m.g Eutrema salsugineum HOM05D000882 ORTHO05D001142 7.8e-06 54.7 85 38.8
FvH4_2g05941 Fragaria vesca HOM05D000882 ORTHO05D001142 7.8e-06 54.7 184 31.0


User provided reference genes

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