Gene: COL.COLO4_27950

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_27950
  • Transcript Identifier COL.rna26673
  • Gene Type Coding gene
  • Location AWUE01019716.1 : 148801-150096 : positive

Gene Family Information

  • ID HOM05D000882
  • #Genes/#Species 677/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna26673
  • GenBank OMO71922.1
  • id gene27922
  • gene_name COLO4_27950
  • uniprot A0A1R3HNR8

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070940
IEA
GOA Databasedephosphorylation of RNA polymerase II C-terminal domain
GO:0070940
IEA
InterProdephosphorylation of RNA polymerase II C-terminal domain

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008420
IEA
GOA DatabaseRNA polymerase II CTD heptapeptide repeat phosphatase activity
GO:0008420
IEA
InterProRNA polymerase II CTD heptapeptide repeat phosphatase activity
GO:0106306
IEA
GOA Databaseprotein serine phosphatase activity
GO:0106307
IEA
GOA Databaseprotein threonine phosphatase activity
GO:0004722
IEA
GOA Databaseprotein serine/threonine phosphatase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004721
IEA
GOA Databasephosphoprotein phosphatase activity
GO:0004721
IEA
InterProphosphoprotein phosphatase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001357 BRCT domain
IPR036420 BRCT domain superfamily
IPR039189 CTD phosphatase Fcp1
IPR004274 FCP1 homology domain
IPR011947 FCP1-like phosphatase, phosphatase domain
IPR023214 HAD superfamily
IPR036412 HAD-like superfamily
Mapman id Description
15.3.2.3 RNA biosynthesis.RNA polymerase II-dependent transcription.RNA polymerase-II phosphorylation/dephosphorylation.group-II phosphatase
18.4.26.1.6 Protein modification.phosphorylation.protein aspartate phosphatase superfamily.FCP phosphatase families.subcluster H/CPL3-4 phosphatase