Gene: Carub.0008s1854

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s1854
  • Transcript Identifier Carub.0008s1854.1
  • Gene Type Coding gene
  • Location scaffold_8 : 9658609-9660589 : positive

Gene Family Information

  • ID HOM05D000882
  • #Genes/#Species 677/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s1854.v1.1
  • pacid 39252753
  • synonym Carubv10026559m.g

Descriptions

  • Description PF00533//PF03031 - BRCA1 C Terminus (BRCT) domain (BRCT) // NLI interacting factor-like phosphatase (NIF)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070940
IEA
InterProdephosphorylation of RNA polymerase II C-terminal domain
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT5G58003

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004721
IEA
InterProphosphoprotein phosphatase activity
GO:0008420
IEA
InterProRNA polymerase II CTD heptapeptide repeat phosphatase activity
GO:0008022
ISO
PLAZA Integrative Orthologyprotein C-terminus binding AT5G58003

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036420 BRCT domain superfamily
IPR004274 FCP1 homology domain
IPR023214 HAD superfamily
IPR001357 BRCT domain
IPR011947 FCP1-like phosphatase, phosphatase domain
IPR039189 CTD phosphatase Fcp1
IPR036412 HAD-like superfamily
Mapman id Description
15.3.2.3 RNA biosynthesis.RNA polymerase II-dependent transcription.RNA polymerase-II phosphorylation/dephosphorylation.group-II phosphatase
18.4.26.1.6 Protein modification.phosphorylation.protein aspartate phosphatase superfamily.FCP phosphatase families.subcluster H/CPL3-4 phosphatase