Gene: Sopen07g001340

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g001340
  • Transcript Identifier Sopen07g001340.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 347452-354772 : positive

Gene Family Information

  • ID HOM05D000882
  • #Genes/#Species 677/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g001340.1

Descriptions

  • Description Encodes a polypeptide that contains FCPH and BRCT domains. RNAi suppression mutant lines were generated, which displayed a range of phenotypic abnormalities, including: incomplete to no cotyledon expansion, slow growth, epinastic leaves or small inflorescences. | C-terminal domain phosphatase-like 4 (CPL4) | FUNCTIONS IN: phosphoprotein phosphatase activity | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: FCP1-like phosphatase, phosphatase domain , NLI interacting factor , BRCT | BEST Arabidopsis thaliana protein match is: C-terminal domain phosphatase-like 3
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070940
IEA
InterProdephosphorylation of RNA polymerase II C-terminal domain
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G19600
GO:1902074
ISO
PLAZA Integrative Orthologyresponse to salt AT3G19600
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT3G19600
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT5G58003
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT3G19600

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004721
IEA
InterProphosphoprotein phosphatase activity
GO:0008420
IEA
InterProRNA polymerase II CTD heptapeptide repeat phosphatase activity
GO:0008022
ISO
PLAZA Integrative Orthologyprotein C-terminus binding AT5G58003

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036420 BRCT domain superfamily
IPR011947 FCP1-like phosphatase, phosphatase domain
IPR036412 HAD-like superfamily
IPR001357 BRCT domain
IPR023214 HAD superfamily
IPR039189 CTD phosphatase Fcp1
IPR004274 FCP1 homology domain
Mapman id Description
15.3.2.3 RNA biosynthesis.RNA polymerase II-dependent transcription.RNA polymerase-II phosphorylation/dephosphorylation.group-II phosphatase
18.4.26.1.6 Protein modification.phosphorylation.protein aspartate phosphatase superfamily.FCP phosphatase families.subcluster H/CPL3-4 phosphatase