Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G0079 Fragaria x ananassa HOM05D005396 ORTHO05D006400 6.0e-180 634.0 316 100.0
FvH4_3g30540 Fragaria vesca HOM05D005396 ORTHO05D006400 2.5e-178 628.6 316 99.4
FAN16G3367 Fragaria x ananassa HOM05D005396 ORTHO05D006400 1.9e-173 612.5 316 96.8
FAN25G1745 Fragaria x ananassa HOM05D005396 ORTHO05D006400 8.7e-171 603.6 305 98.0
RcHm_v2.0_Chr5g0056531 Rosa chinensis HOM05D005396 ORTHO05D006400 3.0e-163 578.6 314 93.0
Prupe.6G153500 Prunus persica HOM05D005396 ORTHO05D006400 9.8e-130 467.2 319 75.9
MD11G1180700 Malus domestica HOM05D005396 ORTHO05D006400 7.7e-127 457.6 316 73.7
Cfa013848 Carpinus fangiana HOM05D005396 ORTHO05D006400 3.4e-114 415.6 314 65.9
FAN21G3982 Fragaria x ananassa HOM05D005396 ORTHO05D006400 2.2e-113 412.9 211 97.6
QL93p0267_0015 Quercus lobata HOM05D005396 ORTHO05D006400 4.9e-113 411.8 318 65.7
Hma1.2p1_0143F.1_g064480 Hydrangea macrophylla HOM05D005396 ORTHO05D006400 1.2e-103 380.6 315 62.2
TAR623G1186 Trochodendron aralioides HOM05D005396 ORTHO05D006400 2.1e-103 379.8 315 61.6
Actinidia06861 Actinidia chinensis HOM05D005396 ORTHO05D006400 3.5e-103 379.0 317 60.3
RhsimUnG0154800 Rhododendron simsii HOM05D005396 ORTHO05D006400 3.5e-103 379.0 318 61.3
Rhsim13G0228100 Rhododendron simsii HOM05D005396 ORTHO05D006400 3.0e-102 375.9 318 60.7
Thecc.09G337500 Theobroma cacao HOM05D005396 ORTHO05D006400 1.1e-101 374.0 325 60.6
Nn4g25074 Nelumbo nucifera HOM05D005396 ORTHO05D006400 1.5e-101 373.6 320 60.3
GSVIVG01037451001 Vitis vinifera HOM05D005396 ORTHO05D006400 1.2e-100 370.5 317 61.2
TWI31G0083 Tripterygium wilfordii HOM05D005396 ORTHO05D006400 2.1e-100 369.8 325 60.0
Atru.chr3.1131 Acer truncatum HOM05D005396 ORTHO05D006400 4.7e-100 368.6 327 59.6
Atru.chr3.1122 Acer truncatum HOM05D005396 ORTHO05D006400 8.1e-100 367.9 327 59.6
Sopen01g002210 Solanum pennellii HOM05D005396 ORTHO05D006400 2.3e-99 366.3 313 62.3
Haze_22522 Corylus avellana HOM05D005396 ORTHO05D006400 3.1e-99 365.9 314 60.8
Hund20984 Selenicereus undatus HOM05D005396 ORTHO05D006400 3.1e-99 365.9 316 60.8
PGSC0003DMG400032195 Solanum tuberosum HOM05D005396 ORTHO05D006400 3.1e-99 365.9 313 62.0
Sc12g0000550 Simmondsia chinensis HOM05D005396 ORTHO05D006400 4.0e-99 365.5 317 60.9
Manes.04G053800 Manihot esculenta HOM05D005396 ORTHO05D006400 6.8e-99 364.8 319 58.9
COL.COLO4_18366 Corchorus olitorius HOM05D005396 ORTHO05D006338 1.5e-98 363.6 318 59.7
CANSAT54G2052 Cannabis sativa HOM05D005396 ORTHO05D006400 2.0e-98 363.2 271 67.5
CAN.G140.42 Capsicum annuum HOM05D005396 ORTHO05D006400 1.3e-97 360.5 313 60.7
Eucgr.J00626 Eucalyptus grandis HOM05D005396 ORTHO05D006400 1.3e-97 360.5 316 57.6
TWI79G1618 Tripterygium wilfordii HOM05D005396 ORTHO05D006400 1.3e-97 360.5 328 59.1
Solyc01g006210.4 Solanum lycopersicum HOM05D005396 ORTHO05D006400 2.2e-97 359.8 312 61.5
Aqoxy5G02307 Aquilegia oxysepala HOM05D005396 ORTHO05D006400 6.4e-97 358.2 319 59.9
PGR119G0906 Punica granatum HOM05D005396 ORTHO05D006400 6.4e-97 358.2 306 58.8
MELO3C014703.2 Cucumis melo HOM05D005396 ORTHO05D006400 1.4e-96 357.1 318 60.1
arahy.Tifrunner.gnm1.ann1.MJD0TM Arachis hypogaea HOM05D005396 ORTHO05D006400 4.1e-96 355.5 298 60.1
Carub.0006s1945 Capsella rubella HOM05D005396 ORTHO05D006400 7.1e-96 354.8 314 60.2
Oeu058539.1 Olea europaea HOM05D005396 ORTHO05D006400 9.2e-96 354.4 317 57.1
Peaxi162Scf00441g00618 Petunia axillaris HOM05D005396 ORTHO05D006400 1.2e-95 354.0 317 60.3
Cpa.g.sc103.64 Carica papaya HOM05D005396 ORTHO05D006400 1.6e-95 353.6 271 63.5
HanXRQChr01g0021191 Helianthus annuus HOM05D005396 ORTHO05D006400 1.6e-95 353.6 311 57.9
A10p18950 Brassica napus HOM05D005396 ORTHO05D006400 2.1e-95 353.2 319 61.1
BraA10t43972Z Brassica rapa HOM05D005396 ORTHO05D006400 2.1e-95 353.2 319 61.1
Glyma.20G050900 Glycine max HOM05D005396 ORTHO05D006400 2.1e-95 353.2 295 59.7
Ciclev10017900m.g Citrus clementina HOM05D005396 ORTHO05D006400 3.5e-95 352.4 316 57.9
Lj6g0008952 Lotus japonicus HOM05D005396 ORTHO05D006400 3.5e-95 352.4 264 65.5
vmacro04253 Vaccinium macrocarpon HOM05D005396 ORTHO05D006400 1.7e-94 350.1 373 50.7
Phvul.L001837 Phaseolus vulgaris HOM05D005396 ORTHO05D006400 2.3e-94 349.7 304 58.9
ClCG02G024200 Citrullus lanatus HOM05D005396 ORTHO05D006400 3.9e-94 349.0 315 59.0
TPR.G28402 Trifolium pratense HOM05D005396 ORTHO05D006400 3.9e-94 349.0 300 59.3
AL6G32750 Arabidopsis lyrata HOM05D005396 ORTHO05D006400 6.6e-94 348.2 315 59.7
Medtr3g078850 Medicago truncatula HOM05D005396 ORTHO05D006400 6.6e-94 348.2 293 59.7
VMungo0540G2152 Vigna mungo HOM05D005396 ORTHO05D006400 8.6e-94 347.8 304 58.2
MSTRG.17554 Avicennia marina HOM05D005396 ORTHO05D006400 1.1e-93 347.4 317 57.1
AUR62001615 Chenopodium quinoa HOM05D005396 ORTHO05D006400 1.9e-93 346.7 315 57.8
Nitab4.5_0001568g0090 Nicotiana tabacum HOM05D005396 ORTHO05D006400 1.9e-93 346.7 292 61.6
Gohir.A03G035066 Gossypium hirsutum HOM05D005396 ORTHO05D006400 2.5e-93 346.3 323 56.0
Gorai.003G140300 Gossypium raimondii HOM05D005396 ORTHO05D006400 2.5e-93 346.3 321 56.7
ECA248G0004 Erigeron canadensis HOM05D005396 ORTHO05D006400 4.3e-93 345.5 310 58.7
Gohir.D03G133200 Gossypium hirsutum HOM05D005396 ORTHO05D006400 5.6e-93 345.1 321 56.7
Ca_16226_v3 Cicer arietinum L. HOM05D005396 ORTHO05D006400 9.6e-93 344.4 348 54.0
Ca_30133_v3 Cicer arietinum L. HOM05D005396 ORTHO05D006400 9.6e-93 344.4 348 54.0
Sp6g23380 Schrenkiella parvula HOM05D005396 ORTHO05D006400 1.2e-92 344.0 275 65.5
CDE02G2011 Ceratophyllum demersum HOM05D005396 ORTHO05D006400 1.6e-92 343.6 330 53.6
Lalb_Chr19g0127081 Lupinus albus HOM05D005396 ORTHO05D006400 1.6e-92 343.6 287 58.9
MBI13_g02393_MAGBIO Magnolia biondii HOM05D005396 ORTHO05D006400 1.6e-92 343.6 331 55.3
BcaC04g19522 Brassica carinata HOM05D005396 ORTHO05D006400 8.1e-92 341.3 319 59.6
Thhalv10013965m.g Eutrema salsugineum HOM05D005396 ORTHO05D006400 8.1e-92 341.3 260 67.3
BolC9t58356H Brassica oleracea HOM05D005396 ORTHO05D006400 1.4e-91 340.5 316 59.5
Migut.N02270 Erythranthe guttata HOM05D005396 ORTHO05D006400 1.4e-91 340.5 314 58.9
Zm00001eb405340 Zea mays HOM05D005396 ORTHO05D006400 1.8e-91 340.1 335 52.2
SGA_v2.0_scaffold3G01566 Striga asiatica HOM05D005396 ORTHO05D006400 5.2e-91 338.6 317 54.6
AT5G21140 Arabidopsis thaliana HOM05D005396 ORTHO05D006400 6.8e-91 338.2 315 58.7
C09p54930 Brassica napus HOM05D005396 ORTHO05D006400 8.9e-91 337.8 268 65.7
Cc01_g01860 Coffea canephora HOM05D005396 ORTHO05D006400 2.6e-90 336.3 318 57.2
Ah.15g099430 Amaranthus hybridus HOM05D005396 ORTHO05D006400 3.4e-90 335.9 312 57.7
DCAR_024368 Daucus carota HOM05D005396 ORTHO05D006400 5.8e-90 335.1 263 62.4
BcaB08g36475 Brassica carinata HOM05D005396 ORTHO05D006400 7.6e-90 334.7 260 66.2
BcaC03g13834 Brassica carinata HOM05D005396 ORTHO05D006400 9.9e-90 334.3 318 57.9
BolC2t07100H Brassica oleracea HOM05D005396 ORTHO05D006400 9.9e-90 334.3 318 57.9
BNapus_Darmor_BZH_scaffold_38p01120 Brassica napus HOM05D005396 ORTHO05D006400 1.3e-89 334.0 322 59.0
BraA02t05619Z Brassica rapa HOM05D005396 ORTHO05D006400 1.3e-89 334.0 322 59.0
SalBow2G1218 Salvia bowleyana HOM05D005396 ORTHO05D006400 1.7e-89 333.6 321 56.1
ATR0307G059 Amborella trichopoda HOM05D005396 ORTHO05D006400 3.8e-89 332.4 312 57.4
Aa31LG1G13640 Aethionema arabicum HOM05D005396 ORTHO05D006400 4.9e-89 332.0 316 55.1
CARHR191730 Cardamine hirsuta HOM05D005396 ORTHO05D006400 8.4e-89 331.3 269 64.3
Duzib170G1145 Durio zibethinus HOM05D005396 ORTHO05D006400 1.4e-88 330.5 321 55.8
BcaB05g22770 Brassica carinata HOM05D005396 ORTHO05D006400 2.4e-88 329.7 316 57.6
Sed0007754 Sechium edule HOM05D005396 ORTHO05D006400 3.2e-88 329.3 261 63.2
THA.LOC104799054 Tarenaya hassleriana HOM05D005396 ORTHO05D006400 4.2e-88 328.9 318 54.1
Potri.004G195600 Populus trichocarpa HOM05D005396 ORTHO05D006400 9.3e-88 327.8 316 55.7
PSO384G1109 Papaver somniferum HOM05D005396 ORTHO05D006400 1.7e-86 323.6 315 54.3
Dinv09746 Davidia involucrata HOM05D005396 ORTHO05D006400 3.0e-86 322.8 237 66.7
Lsat_1_v5_gn_1_68341 Lactuca sativa HOM05D005396 ORTHO05D006400 3.0e-86 322.8 309 55.7
EL10Ac7g16216 Beta vulgaris HOM05D005396 ORTHO05D006400 6.6e-86 321.6 361 51.5
Os11g0130300 Oryza sativa ssp. japonica HOM05D005396 ORTHO05D006400 4.3e-85 318.9 313 52.4
CsaV3_4G017330 Cucumis sativus L. HOM05D005396 ORTHO05D006400 5.6e-85 318.5 342 52.0
arahy.Tifrunner.gnm1.ann1.MU94NL Arachis hypogaea HOM05D005396 ORTHO05D006400 8.1e-84 314.7 358 49.7
Os12g0127100 Oryza sativa ssp. japonica HOM05D005396 ORTHO05D006400 1.8e-83 313.5 313 52.4
Sabra04G0132800 Salix brachista HOM05D005396 ORTHO05D006400 5.8e-82 308.5 373 47.5
Dinv36333 Davidia involucrata HOM05D005396 ORTHO05D006400 1.1e-80 304.3 207 72.0
Nitab4.5_0005132g0020 Nicotiana tabacum HOM05D005396 ORTHO05D006400 1.1e-80 304.3 239 65.7
HPP92_018982 Vanilla planifolia HOM05D005396 ORTHO05D006400 2.7e-79 299.7 316 50.9
PSO339G5547 Papaver somniferum HOM05D005396 ORTHO05D006400 8.1e-76 288.1 235 60.0
Lj2A553G20 Lonicera japonica HOM05D005396 ORTHO05D006400 3.4e-74 282.7 205 68.3
EL10Ac1g01677 Beta vulgaris HOM05D005396 ORTHO05D006400 7.6e-74 281.6 321 51.4
EL10Ac7g16212 Beta vulgaris HOM05D005396 ORTHO05D006400 9.9e-74 281.2 322 51.6
Psat0s646g0040 Pisum sativum HOM05D005396 ORTHO05D006400 1.3e-73 280.8 328 50.6
RcHm_v2.0_Chr5g0056151 Rosa chinensis HOM05D005396 ORTHO05D006400 8.7e-70 268.1 160 83.8
CiPaw.07G159800 Carya illinoinensis HOM05D005396 ORTHO05D006400 4.5e-66 255.8 215 60.0
Pp3c20_10070 Physcomitrium patens HOM05D005396 ORTHO05D006400 3.1e-59 233.0 264 46.6
BolC2t07101H Brassica oleracea HOM05D005396 ORTHO05D006400 2.6e-58 229.9 272 50.0
AUR62020162 Chenopodium quinoa HOM05D005396 ORTHO05D006400 7.6e-58 228.4 260 49.6
BcaC03g13835 Brassica carinata HOM05D005396 ORTHO05D006400 1.7e-57 227.3 272 49.6
BraA02t05620Z Brassica rapa HOM05D005396 ORTHO05D006400 3.8e-57 226.1 273 49.8
SEGI_19301 Sequoiadendron giganteum HOM05D005396 ORTHO05D006400 2.5e-56 223.4 218 51.4
SMO239G0090 Selaginella moellendorffii HOM05D005396 ORTHO05D006400 5.1e-54 215.7 230 47.8
BNapus_Darmor_BZH_scaffold_38p01110 Brassica napus HOM05D005396 ORTHO05D006400 6.7e-54 215.3 276 48.2
SHI25366 Sapria himalayana HOM05D005396 ORTHO05D000023 6.7e-54 215.3 366 37.7
RcHm_v2.0_Chr6g0256561 Rosa chinensis HOM05D005396 ORTHO05D006400 7.7e-50 201.8 113 86.7
EL10Ac7g16203 Beta vulgaris HOM05D005396 ORTHO05D006400 1.9e-48 197.2 206 54.4
unitig_60.g25792 Utricularia gibba HOM05D005396 ORTHO05D006400 2.3e-46 190.3 317 37.9
vmacro22428 Vaccinium macrocarpon HOM05D005396 ORTHO05D006400 3.3e-45 186.4 214 48.6
CSS0010626 Camellia sinensis var. sinensis HOM05D005396 ORTHO05D006400 5.3e-43 179.1 189 50.8
EL10Ac7g16205 Beta vulgaris HOM05D005396 ORTHO05D006400 3.2e-40 169.9 398 34.7
AagrBONN_evm.TU.Sc2ySwM_368.35 Anthoceros agrestis HOM05D005396 ORTHO05D006400 2.7e-39 166.8 198 43.4
CBR_g4478 Chara braunii HOM05D005396 ORTHO05D000048 3.9e-38 162.9 266 32.7
EL10Ac7g16214 Beta vulgaris HOM05D005396 ORTHO05D006400 5.1e-38 162.5 248 45.6
EL10Ac7g16209 Beta vulgaris HOM05D005396 ORTHO05D006400 1.7e-36 157.5 189 49.7
DCAR_024367 Daucus carota HOM05D005396 ORTHO05D006400 2.4e-35 153.7 262 38.2
Zm00001eb199750 Zea mays HOM05D005396 ORTHO05D006400 7.0e-35 152.1 204 44.6
Psat5g030400 Pisum sativum HOM05D001137 ORTHO05D006400 1.7e-33 147.5 122 57.4
CSS0025534 Camellia sinensis var. sinensis HOM05D005396 ORTHO05D006400 1.4e-30 137.9 111 64.9
Mapoly0185s0017 Marchantia polymorpha HOM05D005396 ORTHO05D006400 2.9e-25 120.2 261 32.6
MCO07G491 Micromonas commoda HOM05D005396 ORTHO05D006400 1.2e-18 98.2 196 30.1
Actinidia16276 Actinidia chinensis HOM05D005396 ORTHO05D006400 8.5e-17 92.0 107 49.5
PRCOL_00005415 Prasinoderma coloniale HOM05D005396 ORTHO05D006400 3.6e-15 86.7 188 28.7
Cfa026181 Carpinus fangiana HOM05D002398 ORTHO05D000038 4.1e-11 73.2 275 20.7
HanXRQChr08g0223711 Helianthus annuus HOM05D005396 ORTHO05D006400 5.9e-10 69.3 43 65.1
Cre03.g181650 Chlamydomonas reinhardtii HOM05D005396 ORTHO05D006400 2.8e-07 60.5 151 23.8


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