Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G3958 Fragaria x ananassa HOM05D003044 ORTHO05D001869 2.9e-120 435.3 224 100.0
FvH4_7g05440 Fragaria vesca HOM05D003044 ORTHO05D001869 1.2e-105 386.7 272 79.0
FAN10G1738 Fragaria x ananassa HOM05D003044 ORTHO05D001869 7.2e-95 350.9 201 92.5
FAN01G1587 Fragaria x ananassa HOM05D003044 ORTHO05D001869 3.6e-94 348.6 201 92.0
FAN03G0009 Fragaria x ananassa HOM05D003044 ORTHO05D001869 6.1e-94 347.8 198 93.4
FAN10G0351 Fragaria x ananassa HOM05D003044 ORTHO05D001869 4.0e-93 345.1 201 91.5
FAN03G0021 Fragaria x ananassa HOM05D003044 ORTHO05D001869 2.6e-92 342.4 201 90.5
FvH4_7g05480 Fragaria vesca HOM05D003044 ORTHO05D001869 1.1e-90 337.0 213 86.4
RcHm_v2.0_Chr1g0332241 Rosa chinensis HOM05D003044 ORTHO05D001869 5.0e-72 275.0 217 72.4
MD02G1257800 Malus domestica HOM05D003044 ORTHO05D001869 9.9e-52 207.6 171 69.0
Prupe.2G074800 Prunus persica HOM05D003044 ORTHO05D001869 9.3e-50 201.1 218 56.4
MD07G1063100 Malus domestica HOM05D003044 ORTHO05D001869 7.8e-49 198.0 219 56.6
FvH4_7g05430 Fragaria vesca HOM05D003044 ORTHO05D001869 3.2e-42 176.0 184 59.8
CiPaw.13G045500 Carya illinoinensis HOM05D003044 ORTHO05D001869 2.7e-41 172.9 167 58.1
Ciclev10014057m.g Citrus clementina HOM05D003044 ORTHO05D001869 1.2e-36 157.5 171 53.2
Cfa010501 Carpinus fangiana HOM05D003044 ORTHO05D001869 1.5e-36 157.1 172 54.1
Manes.10G059500 Manihot esculenta HOM05D003044 ORTHO05D001869 5.8e-36 155.2 170 56.5
Gohir.A05G396100 Gossypium hirsutum HOM05D003044 ORTHO05D001869 1.3e-35 154.1 197 49.7
Dinv03806 Davidia involucrata HOM05D003044 ORTHO05D001869 2.9e-35 152.9 177 52.0
QL04p048819 Quercus lobata HOM05D003044 ORTHO05D001869 2.9e-35 152.9 170 53.5
QL04p049165 Quercus lobata HOM05D003044 ORTHO05D001869 2.9e-35 152.9 170 53.5
CiPaw.14G036200 Carya illinoinensis HOM05D003044 ORTHO05D001869 3.8e-35 152.5 170 52.4
Thecc.10G119700 Theobroma cacao HOM05D003044 ORTHO05D001869 8.4e-35 151.4 170 54.1
Haze_03430 Corylus avellana HOM05D003044 ORTHO05D001869 1.1e-34 151.0 172 52.9
Gohir.D04G018900 Gossypium hirsutum HOM05D003044 ORTHO05D001869 1.4e-34 150.6 170 52.4
Duzib114G0797 Durio zibethinus HOM05D003044 ORTHO05D001869 9.3e-34 147.9 167 55.1
Duzib106G0590 Durio zibethinus HOM05D003044 ORTHO05D001869 2.1e-33 146.7 174 53.4
Duzib128G0650 Durio zibethinus HOM05D003044 ORTHO05D001869 3.5e-33 146.0 169 52.1
Gorai.012G022500 Gossypium raimondii HOM05D003044 ORTHO05D001869 3.5e-33 146.0 170 52.9
Gohir.A05G396000 Gossypium hirsutum HOM05D003044 ORTHO05D001869 4.6e-33 145.6 170 53.5
Lalb_Chr21g0312741 Lupinus albus HOM05D003044 ORTHO05D001869 6.0e-33 145.2 173 49.7
Gorai.012G022400 Gossypium raimondii HOM05D003044 ORTHO05D001869 1.0e-32 144.4 170 50.6
Cpa.g.sc33.124 Carica papaya HOM05D003044 ORTHO05D001869 1.3e-32 144.1 157 51.6
CSS0000792 Camellia sinensis var. sinensis HOM05D003044 ORTHO05D001869 1.5e-31 140.6 209 44.5
Medtr1g090340 Medicago truncatula HOM05D003044 ORTHO05D001869 1.9e-31 140.2 171 49.7
Gohir.D04G019000 Gossypium hirsutum HOM05D003044 ORTHO05D001869 3.3e-31 139.4 159 54.1
Manes.07G084000 Manihot esculenta HOM05D003044 ORTHO05D001869 3.3e-31 139.4 174 52.3
Psat6g171360 Pisum sativum HOM05D003044 ORTHO05D001869 3.3e-31 139.4 174 50.6
PGR044G1498 Punica granatum HOM05D003044 ORTHO05D001869 3.3e-31 139.4 172 50.6
TWI63G0823 Tripterygium wilfordii HOM05D003044 ORTHO05D001869 7.4e-31 138.3 170 48.8
Lj6g0024518 Lotus japonicus HOM05D003044 ORTHO05D001869 1.3e-30 137.5 168 52.4
Ca_18140_v3 Cicer arietinum L. HOM05D003044 ORTHO05D001869 1.6e-30 137.1 171 46.8
TWI15G1087 Tripterygium wilfordii HOM05D003044 ORTHO05D001869 1.6e-30 137.1 173 48.0
FAN16G1535 Fragaria x ananassa HOM05D003044 ORTHO05D001869 2.1e-30 136.7 76 93.4
VMungo0720G1731 Vigna mungo HOM05D003044 ORTHO05D001869 6.2e-30 135.2 196 47.4
Ca_10372_v3 Cicer arietinum L. HOM05D003044 ORTHO05D001869 8.1e-30 134.8 168 48.8
Psat6g049400 Pisum sativum HOM05D003044 ORTHO05D001869 8.1e-30 134.8 169 44.4
Actinidia34738 Actinidia chinensis HOM05D003044 ORTHO05D001869 1.1e-29 134.4 181 43.6
Ca_10422_v3 Cicer arietinum L. HOM05D003044 ORTHO05D001869 1.8e-29 133.7 192 45.8
THA.LOC104823155 Tarenaya hassleriana HOM05D003044 ORTHO05D001869 1.8e-29 133.7 192 46.9
Lj2A36T50 Lonicera japonica HOM05D003044 ORTHO05D001869 5.3e-29 132.1 168 47.6
Sabra08G0009300 Salix brachista HOM05D003044 ORTHO05D001869 6.9e-29 131.7 170 49.4
GSVIVG01034601001 Vitis vinifera HOM05D003044 ORTHO05D001869 6.9e-29 131.7 200 44.5
Actinidia31115 Actinidia chinensis HOM05D003044 ORTHO05D001869 9.0e-29 131.3 173 46.8
TPR.G13387 Trifolium pratense HOM05D003044 ORTHO05D001869 1.2e-28 131.0 170 47.6
Hma1.2p1_0098F.1_g048320 Hydrangea macrophylla HOM05D003044 ORTHO05D001869 1.5e-28 130.6 173 48.0
Glyma.20G195200 Glycine max HOM05D003044 ORTHO05D001869 2.6e-28 129.8 170 45.9
Potri.008G014800 Populus trichocarpa HOM05D003044 ORTHO05D001869 2.6e-28 129.8 170 49.4
Lj5g0009221 Lotus japonicus HOM05D003044 ORTHO05D001869 5.8e-28 128.6 168 47.0
Phvul.007G233800 Phaseolus vulgaris HOM05D003044 ORTHO05D001869 7.6e-28 128.3 166 50.0
Lalb_Chr02g0150891 Lupinus albus HOM05D003044 ORTHO05D001869 1.0e-27 127.9 171 46.2
THA.LOC104816476 Tarenaya hassleriana HOM05D003044 ORTHO05D001869 1.3e-27 127.5 188 45.2
TAR633G1492 Trochodendron aralioides HOM05D003044 ORTHO05D001869 1.3e-27 127.5 183 45.9
Glyma.10G194700 Glycine max HOM05D003044 ORTHO05D001869 2.2e-27 126.7 170 47.1
Glyma.20G070600 Glycine max HOM05D003044 ORTHO05D001869 2.2e-27 126.7 177 45.8
Potri.010G244700 Populus trichocarpa HOM05D003044 ORTHO05D001869 8.4e-27 124.8 170 48.2
Sp3g08960 Schrenkiella parvula HOM05D003044 ORTHO05D001869 1.1e-26 124.4 172 48.3
CANSAT56G3871 Cannabis sativa HOM05D003044 ORTHO05D001869 1.9e-26 123.6 187 45.5
Lalb_Chr01g0010681 Lupinus albus HOM05D003044 ORTHO05D001869 2.5e-26 123.2 190 45.3
Nitab4.5_0011494g0020 Nicotiana tabacum HOM05D003044 ORTHO05D001869 3.2e-26 122.9 192 43.2
CSS0029861 Camellia sinensis var. sinensis HOM05D003044 ORTHO05D001869 4.2e-26 122.5 173 45.1
TPR.G19799 Trifolium pratense HOM05D003044 ORTHO05D001869 4.2e-26 122.5 173 42.8
Peaxi162Scf00120g00721 Petunia axillaris HOM05D003044 ORTHO05D001869 7.1e-26 121.7 161 46.6
arahy.Tifrunner.gnm1.ann1.JKR5UJ Arachis hypogaea HOM05D003044 ORTHO05D001869 1.2e-25 120.9 170 47.1
arahy.Tifrunner.gnm1.ann1.Y6HWEI Arachis hypogaea HOM05D003044 ORTHO05D001869 1.2e-25 120.9 170 47.1
Medtr1g040610 Medicago truncatula HOM05D003044 ORTHO05D001869 1.6e-25 120.6 171 44.4
Cc02_g09260 Coffea canephora HOM05D003044 ORTHO05D001869 2.1e-25 120.2 173 46.2
Dinv04420 Davidia involucrata HOM05D003044 ORTHO05D001869 2.1e-25 120.2 161 47.2
FAN18G2861 Fragaria x ananassa HOM05D003044 ORTHO05D001869 2.1e-25 120.2 165 50.3
Glyma.10G120200 Glycine max HOM05D003044 ORTHO05D001869 2.7e-25 119.8 177 44.6
VMungo0720G0604 Vigna mungo HOM05D003044 ORTHO05D001869 2.7e-25 119.8 167 44.3
Nitab4.5_0001781g0070 Nicotiana tabacum HOM05D003044 ORTHO05D001869 3.5e-25 119.4 171 45.6
Thhalv10019905m.g Eutrema salsugineum HOM05D003044 ORTHO05D001869 6.0e-25 118.6 172 48.3
Phvul.007G136500 Phaseolus vulgaris HOM05D003044 ORTHO05D001869 6.0e-25 118.6 158 43.7
Lalb_Chr19g0128991 Lupinus albus HOM05D003044 ORTHO05D001869 1.0e-24 117.9 162 48.8
Aa31LG3G3500 Aethionema arabicum HOM05D003044 ORTHO05D001869 1.3e-24 117.5 171 48.0
Eucgr.J00304 Eucalyptus grandis HOM05D003044 ORTHO05D001869 1.3e-24 117.5 160 48.1
CSS0031943 Camellia sinensis var. sinensis HOM05D003044 ORTHO05D001869 3.0e-24 116.3 170 45.3
CARHR085230 Cardamine hirsuta HOM05D003044 ORTHO05D001869 3.0e-24 116.3 172 46.5
AL3G22120 Arabidopsis lyrata HOM05D003044 ORTHO05D001869 1.5e-23 114.0 172 47.7
EL10Ac8g19444 Beta vulgaris HOM05D003044 ORTHO05D001869 1.5e-23 114.0 224 39.3
C03p44310 Brassica napus HOM05D003044 ORTHO05D001869 2.5e-23 113.2 163 45.4
BolC3t16701H Brassica oleracea HOM05D003044 ORTHO05D001869 2.5e-23 113.2 168 44.6
AT3G10650 Arabidopsis thaliana HOM05D003044 ORTHO05D001869 4.3e-23 112.5 201 43.3
A03p36670 Brassica napus HOM05D003044 ORTHO05D001869 4.3e-23 112.5 169 45.6
BraA03t12831Z Brassica rapa HOM05D003044 ORTHO05D001869 4.3e-23 112.5 169 45.6
Rhsim09G0140200 Rhododendron simsii HOM05D003044 ORTHO05D001869 4.3e-23 112.5 187 41.2
Solyc11g006390.2 Solanum lycopersicum HOM05D003044 ORTHO05D001869 4.3e-23 112.5 160 45.6
Sopen11g002290 Solanum pennellii HOM05D003044 ORTHO05D001869 4.3e-23 112.5 160 45.6
Hma1.2p1_0153F.1_g067850 Hydrangea macrophylla HOM05D003044 ORTHO05D001869 7.4e-23 111.7 175 41.7
Carub.0003s0988 Capsella rubella HOM05D003044 ORTHO05D001869 9.6e-23 111.3 170 47.1
Rhsim03G0094000 Rhododendron simsii HOM05D003044 ORTHO05D001869 9.6e-23 111.3 165 43.0
MBI05_g36784_MAGBIO Magnolia biondii HOM05D003044 ORTHO05D001869 4.8e-22 109.0 176 41.5
Peaxi162Scf00519g00028 Petunia axillaris HOM05D003044 ORTHO05D001869 4.8e-22 109.0 166 44.6
DCAR_018987 Daucus carota HOM05D003044 ORTHO05D001869 6.3e-22 108.6 198 41.9
ClCG08G008450 Citrullus lanatus HOM05D003044 ORTHO05D001869 4.1e-21 105.9 159 44.0
PSO339G5639 Papaver somniferum HOM05D003044 ORTHO05D001869 4.1e-21 105.9 172 41.9
SGA_v2.0_scaffold90G27707 Striga asiatica HOM05D003044 ORTHO05D001869 4.1e-21 105.9 171 40.4
Migut.F00829 Erythranthe guttata HOM05D003044 ORTHO05D001869 5.3e-21 105.5 174 41.4
Sed0023754 Sechium edule HOM05D003044 ORTHO05D001869 5.3e-21 105.5 164 45.7
TAR636G1345 Trochodendron aralioides HOM05D003044 ORTHO05D001869 5.3e-21 105.5 168 41.1
Nitab4.5_0005247g0010 Nicotiana tabacum HOM05D003044 ORTHO05D001869 9.0e-21 104.8 161 41.0
Nitab4.5_0000687g0150 Nicotiana tabacum HOM05D003044 ORTHO05D001869 1.2e-20 104.4 161 40.4
CAN.G143.56 Capsicum annuum HOM05D003044 ORTHO05D001869 2.0e-20 103.6 173 39.9
CsaV3_6G004440 Cucumis sativus L. HOM05D003044 ORTHO05D001869 2.0e-20 103.6 167 41.9
SGA_v2.0_scaffold13G06427 Striga asiatica HOM05D003044 ORTHO05D001869 2.0e-20 103.6 189 38.6
vmacro10333 Vaccinium macrocarpon HOM05D003044 ORTHO05D001869 2.6e-20 103.2 160 41.9
MSTRG.27548 Avicennia marina HOM05D003044 ORTHO05D001869 5.9e-20 102.1 168 42.9
Nn2g14384 Nelumbo nucifera HOM05D003044 ORTHO05D001869 5.9e-20 102.1 180 41.1
Sed0010208 Sechium edule HOM05D003044 ORTHO05D001869 7.6e-20 101.7 166 43.4
Ah.09g231710 Amaranthus hybridus HOM05D003044 ORTHO05D001869 2.9e-19 99.8 216 36.6
MBI11_g01313_MAGBIO Magnolia biondii HOM05D003044 ORTHO05D001869 2.9e-19 99.8 177 41.8
PSO384G0573 Papaver somniferum HOM05D003044 ORTHO05D001869 2.9e-19 99.8 171 40.4
A01p41560 Brassica napus HOM05D003044 ORTHO05D001869 5.0e-19 99.0 163 44.8
BraA01t04231Z Brassica rapa HOM05D003044 ORTHO05D001869 5.0e-19 99.0 163 44.8
Sabra10G0191200 Salix brachista HOM05D003044 ORTHO05D001869 1.1e-18 97.8 218 36.7
MELO3C019915.2 Cucumis melo HOM05D003044 ORTHO05D001869 1.9e-18 97.1 178 39.9
FAN16G3025 Fragaria x ananassa HOM05D005598 ORTHO05D006587 3.2e-18 96.3 112 55.4
Lj3A920T29 Lonicera japonica HOM05D003044 ORTHO05D001869 3.2e-18 96.3 164 41.5
Nn6g34609 Nelumbo nucifera HOM05D003044 ORTHO05D001869 3.2e-18 96.3 190 43.2
Nn6g34615 Nelumbo nucifera HOM05D003044 ORTHO05D001869 4.2e-18 95.9 184 42.9
BolC1t05369H Brassica oleracea HOM05D003044 ORTHO05D001869 5.5e-18 95.5 172 41.9
Migut.F01554 Erythranthe guttata HOM05D003044 ORTHO05D001869 5.5e-18 95.5 157 42.7
Aqoxy1G00609 Aquilegia oxysepala HOM05D003044 ORTHO05D001869 9.3e-18 94.7 199 40.2
AUR62033063 Chenopodium quinoa HOM05D003044 ORTHO05D001869 9.3e-18 94.7 195 40.5
Oeu040012.1 Olea europaea HOM05D003044 ORTHO05D001869 2.1e-17 93.6 173 37.0
Ah.14g085720 Amaranthus hybridus HOM05D003044 ORTHO05D001869 3.6e-17 92.8 173 40.5
Hund22391 Selenicereus undatus HOM05D003044 ORTHO05D001869 1.0e-16 91.3 174 39.1
Lsat_1_v5_gn_2_106321 Lactuca sativa HOM05D003044 ORTHO05D001869 1.8e-16 90.5 177 40.7
Sopen05g033570 Solanum pennellii HOM05D003044 ORTHO05D001869 1.8e-16 90.5 160 40.0
Sc12g0008100 Simmondsia chinensis HOM05D003044 ORTHO05D001869 2.3e-16 90.1 174 40.8
Atru.chr12.1091 Acer truncatum HOM05D003044 ORTHO05D001869 3.0e-16 89.7 99 55.6
CAN.G765.13 Capsicum annuum HOM05D003044 ORTHO05D001869 5.1e-16 89.0 163 39.3
AUR62042206 Chenopodium quinoa HOM05D003044 ORTHO05D001869 1.5e-15 87.4 171 40.9
ECA238G0186 Erigeron canadensis HOM05D003044 ORTHO05D001869 2.5e-15 86.7 178 37.1
Oeu025606.1 Olea europaea HOM05D003044 ORTHO05D001869 7.4e-15 85.1 172 36.6
CAN.G1433.1 Capsicum annuum HOM05D003044 ORTHO05D001869 1.6e-14 84.0 160 38.1
Lsat_1_v5_gn_8_21821 Lactuca sativa HOM05D003044 ORTHO05D001869 2.8e-14 83.2 164 36.6
vmacro07277 Vaccinium macrocarpon HOM05D003044 ORTHO05D001869 3.7e-14 82.8 149 36.9
ClCG05G022010 Citrullus lanatus HOM05D003044 ORTHO05D001869 9.0e-13 78.2 131 36.6
MELO3C012328.2 Cucumis melo HOM05D003044 ORTHO05D001869 5.9e-12 75.5 138 37.7
Sed0011841 Sechium edule HOM05D003044 ORTHO05D001869 7.7e-12 75.1 163 32.5
HanXRQChr07g0194411 Helianthus annuus HOM05D003044 ORTHO05D001869 1.0e-11 74.7 163 36.2
SalBow6G6809 Salvia bowleyana HOM05D003044 ORTHO05D001869 1.0e-11 74.7 158 37.3
CsaV3_5G035150 Cucumis sativus L. HOM05D003044 ORTHO05D001869 1.3e-11 74.3 116 37.1
ECA233G5261 Erigeron canadensis HOM05D003044 ORTHO05D001869 2.9e-11 73.2 177 34.5
Oeu015285.1 Olea europaea HOM05D003044 ORTHO05D001869 3.8e-11 72.8 88 46.6
ATR0697G055 Amborella trichopoda HOM05D003044 ORTHO05D001869 8.5e-11 71.6 172 39.0
CDE07G1072 Ceratophyllum demersum HOM05D003044 ORTHO05D001869 1.1e-10 71.2 167 34.7
Dinv36508 Davidia involucrata HOM05D006756 ORTHO05D001869 1.1e-10 71.2 185 33.5
unitig_46.g18649 Utricularia gibba HOM05D003044 ORTHO05D001869 3.2e-10 69.7 209 32.5
HanXRQChr11g0322911 Helianthus annuus HOM05D003044 ORTHO05D001869 7.9e-09 65.1 163 35.0
Aqoxy2G00627 Aquilegia oxysepala HOM05D003044 ORTHO05D001869 1.0e-08 64.7 180 36.1
THA.LOC104811027 Tarenaya hassleriana HOM05D006756 ORTHO05D001869 2.3e-08 63.5 207 33.3
Solyc05g055110.4 Solanum lycopersicum HOM05D003044 ORTHO05D001869 3.0e-08 63.2 79 45.6
TAR625G0109 Trochodendron aralioides HOM05D006756 ORTHO05D001869 3.0e-08 63.2 185 34.1
HPP92_026330 Vanilla planifolia HOM05D003044 ORTHO05D001869 3.0e-08 63.2 185 27.6
CDE04G3330 Ceratophyllum demersum HOM05D003044 ORTHO05D001869 6.7e-08 62.0 172 33.7
Potri.018G129900 Populus trichocarpa HOM05D006756 ORTHO05D001869 6.7e-08 62.0 108 38.9
arahy.Tifrunner.gnm1.ann1.BW9NFB Arachis hypogaea HOM05D006756 ORTHO05D001869 1.1e-07 61.2 172 33.1
HanXRQChr08g0217351 Helianthus annuus HOM05D003044 ORTHO05D001869 1.1e-07 61.2 159 32.1
unitig_736.g22522 Utricularia gibba HOM05D003044 ORTHO05D001869 1.5e-07 60.8 113 40.7
HanXRQChr02g0049311 Helianthus annuus HOM05D003044 ORTHO05D001869 2.6e-07 60.1 157 32.5
Hund09258 Selenicereus undatus HOM05D006756 ORTHO05D001869 2.6e-07 60.1 210 31.9
HPP92_019542 Vanilla planifolia HOM05D003044 ORTHO05D001869 2.6e-07 60.1 174 33.3
arahy.Tifrunner.gnm1.ann1.L57GI5 Arachis hypogaea HOM05D006756 ORTHO05D001869 3.3e-07 59.7 172 33.1
Cpa.g.sc46.13 Carica papaya HOM05D006756 ORTHO05D001869 3.3e-07 59.7 167 31.1
Aa31LG1G14420 Aethionema arabicum HOM05D006756 ORTHO05D001869 7.4e-07 58.5 176 33.0
CANSAT11G2071 Cannabis sativa HOM05D006756 ORTHO05D001869 7.4e-07 58.5 159 30.8
PSO017G1657 Papaver somniferum HOM05D006756 ORTHO05D001869 7.4e-07 58.5 195 30.8
HanXRQChr06g0180441 Helianthus annuus HOM05D006756 ORTHO05D001869 1.7e-06 57.4 166 30.7
PGR142G2180 Punica granatum HOM05D006756 ORTHO05D001869 1.7e-06 57.4 184 31.5
HanXRQChr07g0195171 Helianthus annuus HOM05D003044 ORTHO05D001869 3.7e-06 56.2 155 33.5
MD02G1029800 Malus domestica HOM05D006756 ORTHO05D001869 4.8e-06 55.8 183 27.3
GSVIVG01015553001 Vitis vinifera HOM05D006756 ORTHO05D001869 4.8e-06 55.8 166 30.7
VMungo1309G0147 Vigna mungo HOM05D006756 ORTHO05D001869 8.2e-06 55.1 162 30.9


User provided reference genes

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