Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G2876 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.8e-54 215.7 108 100.0
FvH4_6g39550 Fragaria vesca HOM05D005235 ORTHO05D006938 8.7e-46 186.8 96 96.9
FAN05G2159 Fragaria x ananassa HOM05D005235 ORTHO05D006938 8.7e-46 186.8 98 93.9
FAN13G2026 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.6e-44 182.6 96 92.7
MD15G1428200 Malus domestica HOM05D005235 ORTHO05D006938 2.8e-44 181.8 104 84.6
RcHm_v2.0_Chr7g0221241 Rosa chinensis HOM05D005235 ORTHO05D006938 6.2e-44 180.6 96 91.7
FAN08G3020 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.4e-43 179.5 96 91.7
FvH4_5g28930 Fragaria vesca HOM05D005235 ORTHO05D006938 1.8e-43 179.1 96 90.6
FAN18G1214 Fragaria x ananassa HOM05D005235 ORTHO05D006938 9.0e-43 176.8 95 90.5
Prupe.1G572900 Prunus persica HOM05D005235 ORTHO05D006938 3.4e-42 174.9 96 87.5
MD08G1236200 Malus domestica HOM05D005235 ORTHO05D006938 4.5e-42 174.5 96 87.5
Ciclev10015023m.g Citrus clementina HOM05D005235 ORTHO05D006938 1.5e-37 159.5 96 79.2
Potri.014G140400 Populus trichocarpa HOM05D005235 ORTHO05D006938 3.3e-37 158.3 96 80.2
Gohir.A01G046600 Gossypium hirsutum HOM05D005235 ORTHO05D006938 5.7e-37 157.5 96 76.0
Gohir.D01G037300 Gossypium hirsutum HOM05D005235 ORTHO05D006938 5.7e-37 157.5 96 76.0
Sed0026739 Sechium edule HOM05D005235 ORTHO05D006938 5.7e-37 157.5 96 78.1
Duzib213G0463 Durio zibethinus HOM05D005235 ORTHO05D006938 7.4e-37 157.1 96 76.0
Sabra14G0105800 Salix brachista HOM05D005235 ORTHO05D006938 9.7e-37 156.8 96 79.2
COL.COLO4_17457 Corchorus olitorius HOM05D005235 ORTHO05D000503 2.2e-36 155.6 96 76.0
Rhsim08G0037300 Rhododendron simsii HOM05D005235 ORTHO05D006938 3.7e-36 154.8 96 72.9
CANSAT21G0039 Cannabis sativa HOM05D005235 ORTHO05D006938 4.8e-36 154.5 96 77.1
vmacro22930 Vaccinium macrocarpon HOM05D005235 ORTHO05D006938 6.3e-36 154.1 96 72.9
Glyma.14G202100 Glycine max HOM05D005235 ORTHO05D006938 8.2e-36 153.7 96 77.1
Manes.04G096400 Manihot esculenta HOM05D005235 ORTHO05D006938 8.2e-36 153.7 96 75.0
PGR142G4255 Punica granatum HOM05D005235 ORTHO05D006938 8.2e-36 153.7 96 77.1
VMungo0647G1084 Vigna mungo HOM05D005235 ORTHO05D006938 8.2e-36 153.7 96 77.1
Lalb_Chr15g0085971 Lupinus albus HOM05D005235 ORTHO05D006938 1.1e-35 153.3 96 76.0
Medtr4g121070 Medicago truncatula HOM05D005235 ORTHO05D006938 1.1e-35 153.3 96 77.1
Atru.BG.29.p Acer truncatum HOM05D005235 ORTHO05D006938 1.4e-35 152.9 96 78.1
Ca_15026_v3 Cicer arietinum L. HOM05D005235 ORTHO05D006938 1.4e-35 152.9 96 76.0
Gorai.002G045400 Gossypium raimondii HOM05D005235 ORTHO05D006938 1.4e-35 152.9 96 75.0
Thecc.07G135900 Theobroma cacao HOM05D005235 ORTHO05D006938 1.8e-35 152.5 95 73.7
Medtr3g466250 Medicago truncatula HOM05D005235 ORTHO05D006938 2.4e-35 152.1 96 77.1
Psat5g150600 Pisum sativum HOM05D005235 ORTHO05D006938 3.1e-35 151.8 96 76.0
Lj3g0002085 Lotus japonicus HOM05D005235 ORTHO05D006938 5.3e-35 151.0 96 76.0
Phvul.008G249300 Phaseolus vulgaris HOM05D005235 ORTHO05D006938 5.3e-35 151.0 96 74.0
TPR.G24949 Trifolium pratense HOM05D005235 ORTHO05D006938 5.3e-35 151.0 96 76.0
CsaV3_4G004390 Cucumis sativus L. HOM05D005235 ORTHO05D006938 6.9e-35 150.6 96 75.0
arahy.Tifrunner.gnm1.ann1.354T1Y Arachis hypogaea HOM05D005235 ORTHO05D006938 9.0e-35 150.2 96 75.0
Cfa002235 Carpinus fangiana HOM05D005235 ORTHO05D006938 9.0e-35 150.2 96 71.9
CiPaw.03G253600 Carya illinoinensis HOM05D005235 ORTHO05D006938 9.0e-35 150.2 96 72.9
ClCG07G017190 Citrullus lanatus HOM05D005235 ORTHO05D006938 9.0e-35 150.2 96 75.0
Lj6g0011193 Lotus japonicus HOM05D005235 ORTHO05D006938 9.0e-35 150.2 96 75.0
QL10p019537 Quercus lobata HOM05D005235 ORTHO05D006938 9.0e-35 150.2 96 72.9
AUR62028546 Chenopodium quinoa HOM05D005235 ORTHO05D006938 1.2e-34 149.8 96 71.9
AUR62033498 Chenopodium quinoa HOM05D005235 ORTHO05D006938 1.2e-34 149.8 96 71.9
arahy.Tifrunner.gnm1.ann1.0Z73T7 Arachis hypogaea HOM05D005235 ORTHO05D006938 1.5e-34 149.4 96 74.0
MELO3C017627.2 Cucumis melo HOM05D005235 ORTHO05D006938 1.5e-34 149.4 96 74.0
TWI32G1353 Tripterygium wilfordii HOM05D005235 ORTHO05D006938 1.5e-34 149.4 95 72.6
GSVIVG01023528001 Vitis vinifera HOM05D005235 ORTHO05D006938 2.6e-34 148.7 96 70.8
Haze_25416 Corylus avellana HOM05D005235 ORTHO05D006938 3.4e-34 148.3 96 70.8
Dinv25083 Davidia involucrata HOM05D005235 ORTHO05D006938 4.5e-34 147.9 96 71.9
HanXRQChr08g0226751 Helianthus annuus HOM05D005235 ORTHO05D006938 4.5e-34 147.9 96 71.9
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 7.6e-34 147.1 97 72.2
Glyma.02G234500 Glycine max HOM05D005235 ORTHO05D006938 1.0e-33 146.7 106 66.0
Oeu061455.1 Olea europaea HOM05D005235 ORTHO05D006938 1.0e-33 146.7 96 70.8
TAR633G2758 Trochodendron aralioides HOM05D005235 ORTHO05D006938 1.0e-33 146.7 96 72.9
Eucgr.I01565 Eucalyptus grandis HOM05D005235 ORTHO05D006938 1.3e-33 146.4 96 72.9
EL10Ac7g16931 Beta vulgaris HOM05D005235 ORTHO05D006938 1.7e-33 146.0 100 68.0
Cc03_g16140 Coffea canephora HOM05D005235 ORTHO05D006938 1.7e-33 146.0 96 72.9
Ah.08g210620 Amaranthus hybridus HOM05D005235 ORTHO05D006938 5.0e-33 144.4 96 69.8
CARHR076660 Cardamine hirsuta HOM05D005235 ORTHO05D006938 1.4e-32 142.9 96 67.7
Lsat_1_v5_gn_6_15261 Lactuca sativa HOM05D005235 ORTHO05D006938 1.4e-32 142.9 96 68.8
TAR626G0946 Trochodendron aralioides HOM05D005235 ORTHO05D006938 2.5e-32 142.1 96 71.9
AL3G12040 Arabidopsis lyrata HOM05D005235 ORTHO05D006938 4.2e-32 141.4 96 66.7
ECA233G3576 Erigeron canadensis HOM05D005235 ORTHO05D006938 4.2e-32 141.4 96 67.7
MBI04_g19169_MAGBIO Magnolia biondii HOM05D005235 ORTHO05D006938 4.2e-32 141.4 96 70.8
Sc01g0007490 Simmondsia chinensis HOM05D005235 ORTHO05D006938 5.5e-32 141.0 96 67.7
unitig_22.g5329 Utricularia gibba HOM05D005235 ORTHO05D006938 7.2e-32 140.6 96 69.8
Migut.N01688 Erythranthe guttata HOM05D005235 ORTHO05D006938 1.2e-31 139.8 96 68.8
Aa31LG5G13140 Aethionema arabicum HOM05D005235 ORTHO05D006938 1.6e-31 139.4 96 65.6
AT3G02660 Arabidopsis thaliana HOM05D005235 ORTHO05D006938 1.6e-31 139.4 96 65.6
Aqoxy1G00862 Aquilegia oxysepala HOM05D005235 ORTHO05D006938 2.1e-31 139.0 96 68.8
CDE05G2156 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 2.1e-31 139.0 98 65.3
Hund00893 Selenicereus undatus HOM05D005235 ORTHO05D006938 2.1e-31 139.0 96 68.8
Solyc07g008530.1 Solanum lycopersicum HOM05D005235 ORTHO05D006938 2.1e-31 139.0 97 69.1
Sopen07g004450 Solanum pennellii HOM05D005235 ORTHO05D006938 2.1e-31 139.0 97 69.1
Migut.O00424 Erythranthe guttata HOM05D005235 ORTHO05D006938 2.7e-31 138.7 96 67.7
FAN04G0607 Fragaria x ananassa HOM05D005235 ORTHO05D006938 2.7e-31 138.7 72 93.1
Thhalv10020578m.g Eutrema salsugineum HOM05D005235 ORTHO05D006938 3.6e-31 138.3 96 64.6
SalBow4G1042 Salvia bowleyana HOM05D005235 ORTHO05D006938 3.6e-31 138.3 96 69.8
BNapus_Darmor_BZH_scaffold_122p00160 Brassica napus HOM05D005235 ORTHO05D006938 4.6e-31 137.9 96 63.5
BNapus_Darmor_BZH_scaffold_99p00190 Brassica napus HOM05D005235 ORTHO05D006938 4.6e-31 137.9 96 63.5
BraA01t04625Z Brassica rapa HOM05D005235 ORTHO05D006938 4.6e-31 137.9 96 63.5
Nn6g33287 Nelumbo nucifera HOM05D005235 ORTHO05D006938 4.6e-31 137.9 96 68.8
A03p33070 Brassica napus HOM05D005235 ORTHO05D006938 6.1e-31 137.5 96 63.5
Sp3g01700 Schrenkiella parvula HOM05D005235 ORTHO05D006938 6.1e-31 137.5 96 63.5
Peaxi162Scf01038g00005 Petunia axillaris HOM05D005235 ORTHO05D006938 7.9e-31 137.1 97 64.9
BolC1t05885H Brassica oleracea HOM05D005235 ORTHO05D006938 1.0e-30 136.7 96 62.5
DCAR_005998 Daucus carota HOM05D005235 ORTHO05D006938 1.0e-30 136.7 96 67.7
CAN.G192.3 Capsicum annuum HOM05D005235 ORTHO05D006938 1.4e-30 136.3 97 68.0
Nitab4.5_0000949g0050 Nicotiana tabacum HOM05D005235 ORTHO05D006938 1.4e-30 136.3 99 65.7
BcaC01g04429 Brassica carinata HOM05D005235 ORTHO05D006938 1.8e-30 136.0 96 62.5
BolC3t16290H Brassica oleracea HOM05D005235 ORTHO05D006938 1.8e-30 136.0 96 62.5
CDE05G0570 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 1.8e-30 136.0 96 65.6
Nitab4.5_0004867g0070 Nicotiana tabacum HOM05D000907 ORTHO05D000753 1.8e-30 136.0 101 65.3
CSS0000006 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 2.3e-30 135.6 96 66.7
CSS0008907 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 2.3e-30 135.6 96 66.7
Nitab4.5_0000491g0060 Nicotiana tabacum HOM05D005235 ORTHO05D006938 3.0e-30 135.2 97 67.0
PGSC0003DMG400022992 Solanum tuberosum HOM05D005235 ORTHO05D006938 3.0e-30 135.2 97 67.0
SGA_v2.0_scaffold68G22803 Striga asiatica HOM05D005235 ORTHO05D006938 5.1e-30 134.4 97 66.0
Actinidia19541 Actinidia chinensis HOM05D005235 ORTHO05D006938 6.7e-30 134.0 97 68.0
Actinidia37705 Actinidia chinensis HOM05D005235 ORTHO05D006938 6.7e-30 134.0 92 71.7
BraA03t12477Z Brassica rapa HOM05D005235 ORTHO05D006938 1.1e-29 133.3 96 61.5
THA.LOC104820931 Tarenaya hassleriana HOM05D005235 ORTHO05D006938 1.5e-29 132.9 96 60.4
BcaB04g19392 Brassica carinata HOM05D005235 ORTHO05D006938 2.5e-29 132.1 96 61.5
Os01g0500900 Oryza sativa ssp. japonica HOM05D005235 ORTHO05D006938 2.8e-28 128.6 96 65.6
PSO173G0108 Papaver somniferum HOM05D005235 ORTHO05D006938 4.8e-28 127.9 96 62.5
PSO566G0178 Papaver somniferum HOM05D005235 ORTHO05D006938 1.1e-27 126.7 96 61.5
ATR0021G047 Amborella trichopoda HOM05D005235 ORTHO05D006938 1.8e-27 125.9 103 58.3
Zm00001eb080850 Zea mays HOM05D005235 ORTHO05D006938 3.1e-27 125.2 96 61.5
HPP92_015557 Vanilla planifolia HOM05D005235 ORTHO05D006938 9.1e-27 123.6 96 62.5
SEGI_38902 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 2.6e-26 122.1 96 60.4
AagrBONN_evm.TU.Sc2ySwM_368.429 Anthoceros agrestis HOM05D005235 ORTHO05D006938 2.1e-23 112.5 96 57.3
SMO200G0177 Selaginella moellendorffii HOM05D005235 ORTHO05D006938 6.1e-23 110.9 101 53.5
Mapoly0163s0012 Marchantia polymorpha HOM05D005235 ORTHO05D006938 1.4e-22 109.8 100 54.0
Pp3c3_3070 Physcomitrium patens HOM05D005235 ORTHO05D006938 1.1e-21 106.7 96 54.2
arahy.Tifrunner.gnm1.ann1.8HX8KM Arachis hypogaea HOM05D005235 ORTHO05D006938 7.4e-21 104.0 72 68.1
PRCOL_00003633 Prasinoderma coloniale HOM05D005235 ORTHO05D006938 1.1e-19 100.1 101 46.5
Cre13.g606050 Chlamydomonas reinhardtii HOM05D005235 ORTHO05D006938 7.7e-18 94.0 96 46.9
Lj8A333T11 Lonicera japonica HOM05D005235 ORTHO05D006938 5.0e-17 91.3 96 52.1
BolC1t05886H Brassica oleracea HOM05D005235 ORTHO05D006938 1.4e-16 89.7 66 65.2
MCO13G625 Micromonas commoda HOM05D005235 ORTHO05D006938 2.5e-16 89.0 96 43.8
CBR_g10848 Chara braunii HOM05D005235 ORTHO05D006938 2.8e-12 75.5 91 44.0
Oeu046079.2 Olea europaea HOM05D002040 ORTHO05D002502 5.3e-11 71.2 60 56.7
BolC1t05887H Brassica oleracea HOM05D005235 ORTHO05D014124 7.0e-11 70.9 67 62.7


User provided reference genes

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