Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G0145 Fragaria x ananassa HOM05D005074 ORTHO05D006853 5.4e-159 564.3 291 100.0
FAN09G1779 Fragaria x ananassa HOM05D005074 ORTHO05D006853 2.7e-142 508.8 268 98.1
FAN14G3962 Fragaria x ananassa HOM05D005074 ORTHO05D006853 2.0e-137 492.7 294 88.4
FvH4_6g11090 Fragaria vesca HOM05D005074 ORTHO05D006853 1.1e-135 486.9 294 87.4
FAN05G5223 Fragaria x ananassa HOM05D005074 ORTHO05D006853 3.0e-133 478.8 294 86.1
FAN02G3586 Fragaria x ananassa HOM05D005074 ORTHO05D006853 6.7e-125 451.1 294 81.0
FAN09G4669 Fragaria x ananassa HOM05D005074 ORTHO05D006853 2.5e-119 432.6 257 87.2
RcHm_v2.0_Chr3g0462521 Rosa chinensis HOM05D005074 ORTHO05D006853 7.1e-119 431.0 294 79.6
MD04G1160300 Malus domestica HOM05D005074 ORTHO05D006853 1.4e-111 406.8 267 79.4
Prupe.6G280900 Prunus persica HOM05D005074 ORTHO05D006853 1.1e-106 390.6 267 76.0
QL08p015889 Quercus lobata HOM05D005074 ORTHO05D006853 5.5e-95 351.7 297 65.0
Haze_21033 Corylus avellana HOM05D005074 ORTHO05D006853 9.7e-92 340.9 298 64.8
Ciclev10011130m.g Citrus clementina HOM05D005074 ORTHO05D006853 4.1e-90 335.5 297 62.3
CiPaw.10G158300 Carya illinoinensis HOM05D005074 ORTHO05D006853 7.0e-90 334.7 298 63.1
Sabra16G0116100 Salix brachista HOM05D005074 ORTHO05D006853 7.0e-90 334.7 297 62.3
Potri.016G120200 Populus trichocarpa HOM05D005074 ORTHO05D006853 9.1e-90 334.3 297 62.3
Cfa017171 Carpinus fangiana HOM05D005074 ORTHO05D006853 1.2e-89 334.0 298 64.4
TWI74G0571 Tripterygium wilfordii HOM05D005074 ORTHO05D006853 1.6e-89 333.6 299 61.2
Atru.chr8.2282 Acer truncatum HOM05D005074 ORTHO05D006853 2.6e-89 332.8 270 68.1
Lj2C71T3 Lonicera japonica HOM05D005074 ORTHO05D006853 1.3e-88 330.5 294 62.9
arahy.Tifrunner.gnm1.ann1.N71AR0 Arachis hypogaea HOM05D005074 ORTHO05D006853 1.7e-88 330.1 273 65.9
CSS0046053 Camellia sinensis var. sinensis HOM05D005074 ORTHO05D006853 1.7e-88 330.1 294 62.2
CSS0047541 Camellia sinensis var. sinensis HOM05D005074 ORTHO05D006853 1.7e-88 330.1 294 62.2
Dinv13134 Davidia involucrata HOM05D005074 ORTHO05D006853 2.9e-88 329.3 266 66.5
Actinidia29087 Actinidia chinensis HOM05D005074 ORTHO05D006853 5.0e-88 328.6 267 65.5
Glyma.01G117800 Glycine max HOM05D005074 ORTHO05D006853 1.9e-87 326.6 272 64.3
Lalb_Chr07g0191391 Lupinus albus HOM05D005074 ORTHO05D006853 4.2e-87 325.5 269 63.6
vmacro20302 Vaccinium macrocarpon HOM05D005074 ORTHO05D006853 9.4e-87 324.3 267 65.2
VMungo0331G1905 Vigna mungo HOM05D005074 ORTHO05D006853 2.7e-86 322.8 272 62.5
TAR633G0154 Trochodendron aralioides HOM05D005074 ORTHO05D006853 2.3e-85 319.7 297 62.3
Lj5g0028092 Lotus japonicus HOM05D005074 ORTHO05D006853 3.0e-85 319.3 273 63.4
Phvul.010G073200 Phaseolus vulgaris HOM05D005074 ORTHO05D006853 3.0e-85 319.3 271 62.4
Hma1.2p1_0501F.1_g167650 Hydrangea macrophylla HOM05D005074 ORTHO05D006853 1.5e-84 317.0 296 61.1
PSO339G4313 Papaver somniferum HOM05D005074 ORTHO05D006853 4.4e-84 315.5 271 64.2
Hund10968 Selenicereus undatus HOM05D005074 ORTHO05D006853 5.7e-84 315.1 304 61.5
MD12G1172800 Malus domestica HOM05D005074 ORTHO05D006853 1.3e-83 313.9 232 71.1
MELO3C009144.2 Cucumis melo HOM05D005074 ORTHO05D006853 2.2e-83 313.2 298 60.1
PSO384G2802 Papaver somniferum HOM05D005074 ORTHO05D006853 2.8e-83 312.8 294 59.5
Medtr1g024820 Medicago truncatula HOM05D005074 ORTHO05D006853 6.3e-83 311.6 300 57.7
TPR.G34365 Trifolium pratense HOM05D005074 ORTHO05D006853 1.8e-82 310.1 300 57.3
ClCG10G022350 Citrullus lanatus HOM05D005074 ORTHO05D006853 2.4e-82 309.7 298 58.7
Psat6g003720 Pisum sativum HOM05D005074 ORTHO05D006853 2.4e-82 309.7 300 58.0
CsaV3_3G033540 Cucumis sativus L. HOM05D005074 ORTHO05D006853 4.1e-82 308.9 298 59.1
Ca_13410_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 9.1e-82 307.8 302 56.0
Ca_13419_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 9.1e-82 307.8 302 56.0
Nn2g10923 Nelumbo nucifera HOM05D005074 ORTHO05D006853 9.1e-82 307.8 294 60.2
Gorai.012G116900 Gossypium raimondii HOM05D005074 ORTHO05D006853 2.0e-81 306.6 295 59.7
THA.LOC104816650 Tarenaya hassleriana HOM05D005074 ORTHO05D006853 2.7e-81 306.2 270 63.0
Gohir.A04G093700 Gossypium hirsutum HOM05D005074 ORTHO05D006853 3.5e-81 305.8 292 59.2
Gohir.D04G133000 Gossypium hirsutum HOM05D005074 ORTHO05D006853 3.5e-81 305.8 295 60.0
Duzib128G0037 Durio zibethinus HOM05D005074 ORTHO05D006853 7.7e-81 304.7 298 60.1
Nitab4.5_0000195g0210 Nicotiana tabacum HOM05D005074 ORTHO05D006853 7.7e-81 304.7 294 57.8
EL10Ac5g12524 Beta vulgaris HOM05D005074 ORTHO05D006853 1.7e-80 303.5 277 62.8
Nitab4.5_0012964g0020 Nicotiana tabacum HOM05D005074 ORTHO05D006853 1.7e-80 303.5 294 58.2
Rhsim05G0219800 Rhododendron simsii HOM05D005074 ORTHO05D006853 1.7e-80 303.5 301 59.1
Aqoxy4G02460 Aquilegia oxysepala HOM05D005074 ORTHO05D006853 2.2e-80 303.1 298 60.4
COL.COLO4_14500 Corchorus olitorius HOM05D005074 ORTHO05D006853 5.0e-80 302.0 295 59.3
Thecc.05G011500 Theobroma cacao HOM05D005074 ORTHO05D006853 5.0e-80 302.0 295 60.0
MBI03_g18944_MAGBIO Magnolia biondii HOM05D005074 ORTHO05D006853 8.5e-80 301.2 301 58.8
Cc06_g01060 Coffea canephora HOM05D005074 ORTHO05D006853 1.5e-79 300.4 297 58.2
Sed0022379 Sechium edule HOM05D005074 ORTHO05D006853 1.5e-79 300.4 298 57.7
Sopen09g001080 Solanum pennellii HOM05D005074 ORTHO05D006853 2.5e-79 299.7 294 58.8
PGSC0003DMG400006257 Solanum tuberosum HOM05D005074 ORTHO05D006853 3.2e-79 299.3 294 58.2
Solyc09g005100.4 Solanum lycopersicum HOM05D005074 ORTHO05D006853 5.5e-79 298.5 294 58.5
CANSAT35G1267 Cannabis sativa HOM05D005074 ORTHO05D006853 3.6e-78 295.8 297 55.2
CAN.G41.5 Capsicum annuum HOM05D005074 ORTHO05D006853 8.0e-78 294.7 293 57.3
PGR031G0257 Punica granatum HOM05D005074 ORTHO05D006853 8.0e-78 294.7 295 58.3
AUR62030501 Chenopodium quinoa HOM05D005074 ORTHO05D006853 1.0e-77 294.3 276 60.9
Carub.0006s0050 Capsella rubella HOM05D005074 ORTHO05D006853 1.4e-77 293.9 294 57.5
Sp6g40630 Schrenkiella parvula HOM05D005074 ORTHO05D006853 2.3e-77 293.1 294 57.5
Thhalv10012562m.g Eutrema salsugineum HOM05D005074 ORTHO05D006853 6.8e-77 291.6 294 57.5
Peaxi162Scf01132g00134 Petunia axillaris HOM05D005074 ORTHO05D006853 6.8e-77 291.6 294 56.8
GSVIVG01003941001 Vitis vinifera HOM05D005074 ORTHO05D006853 8.8e-77 291.2 294 56.5
SGA_v2.0_scaffold85G26714 Striga asiatica HOM05D005074 ORTHO05D006853 3.4e-76 289.3 297 54.5
Sc22g0002590 Simmondsia chinensis HOM05D005074 ORTHO05D006853 4.4e-76 288.9 295 55.9
CARHR211670 Cardamine hirsuta HOM05D005074 ORTHO05D006853 9.8e-76 287.7 294 56.8
AUR62030792 Chenopodium quinoa HOM05D005074 ORTHO05D006853 1.7e-75 287.0 276 59.8
AL6G10830 Arabidopsis lyrata HOM05D005074 ORTHO05D006853 5.4e-74 282.0 294 55.4
C09p74610 Brassica napus HOM05D005074 ORTHO05D006853 9.1e-74 281.2 296 55.7
BraA10t45403Z Brassica rapa HOM05D005074 ORTHO05D006853 9.1e-74 281.2 294 55.4
BolC9t60195H Brassica oleracea HOM05D005074 ORTHO05D006853 1.6e-73 280.4 296 55.7
AT5G01310 Arabidopsis thaliana HOM05D005074 ORTHO05D006853 2.7e-73 279.6 294 55.4
A10p33710 Brassica napus HOM05D005074 ORTHO05D006853 2.7e-73 279.6 294 55.1
Ah.02g115540 Amaranthus hybridus HOM05D005074 ORTHO05D006853 3.5e-73 279.3 281 56.9
MSTRG.18991 Avicennia marina HOM05D005074 ORTHO05D006853 3.5e-73 279.3 297 54.2
HanXRQChr12g0383191 Helianthus annuus HOM05D005074 ORTHO05D006853 1.7e-72 276.9 294 54.4
Aa31LG1G22940 Aethionema arabicum HOM05D005074 ORTHO05D006853 8.6e-72 274.6 295 55.3
Lsat_1_v5_gn_8_100780 Lactuca sativa HOM05D005074 ORTHO05D006853 1.1e-71 274.2 284 53.5
DCAR_006624 Daucus carota HOM05D005074 ORTHO05D006853 6.1e-70 268.5 337 48.7
RcHm_v2.0_Chr3g0462501 Rosa chinensis HOM05D005074 ORTHO05D006853 8.0e-70 268.1 272 59.9
Eucgr.A00552 Eucalyptus grandis HOM05D005074 ORTHO05D006853 1.0e-69 267.7 248 60.9
Zm00001eb013510 Zea mays HOM05D005074 ORTHO05D006853 2.3e-69 266.5 304 52.6
HPP92_025102 Vanilla planifolia HOM05D005074 ORTHO05D006853 6.8e-69 265.0 294 53.1
Migut.J00131 Erythranthe guttata HOM05D005074 ORTHO05D006853 3.7e-67 259.2 267 52.8
SHI12858 Sapria himalayana HOM05D005074 ORTHO05D006853 1.1e-66 257.7 295 52.2
SalBow5G0276 Salvia bowleyana HOM05D005074 ORTHO05D006853 4.1e-66 255.8 296 50.7
SalBow5G3519 Salvia bowleyana HOM05D005074 ORTHO05D006853 4.1e-66 255.8 296 51.0
unitig_27.g24848 Utricularia gibba HOM05D005074 ORTHO05D006853 3.9e-64 249.2 294 49.3
Manes.09G106200 Manihot esculenta HOM05D005074 ORTHO05D006853 1.2e-60 237.7 211 62.6
ATR0716G066 Amborella trichopoda HOM05D005074 ORTHO05D006853 5.4e-58 228.8 353 42.8
FAN09G0802 Fragaria x ananassa HOM05D005074 ORTHO05D006853 6.6e-56 221.9 148 82.4
Aa31LG1G22960 Aethionema arabicum HOM05D005074 ORTHO05D006853 7.5e-52 208.4 267 46.4
CDE08G0259 Ceratophyllum demersum HOM05D005074 ORTHO05D006853 7.5e-52 208.4 296 43.9
BcaC06g31973 Brassica carinata HOM05D005074 ORTHO05D006853 2.9e-51 206.5 295 46.4
Oeu033574.2 Olea europaea HOM05D005074 ORTHO05D006853 3.9e-48 196.1 253 49.4
MD05G1095500 Malus domestica HOM05D005074 ORTHO05D006853 2.5e-47 193.4 118 75.4
Cpa.g.sc120.24 Carica papaya HOM05D005074 ORTHO05D006853 4.3e-47 192.6 189 55.6
Aa31LG1G22950 Aethionema arabicum HOM05D005074 ORTHO05D006853 6.8e-45 185.3 269 43.9
Aa31LG8G1910 Aethionema arabicum HOM05D005074 ORTHO05D006853 2.6e-44 183.3 267 43.8
Mapoly0120s0055 Marchantia polymorpha HOM05D005074 ORTHO05D006853 9.6e-39 164.9 300 37.7
AagrBONN_evm.TU.Sc2ySwM_362.194 Anthoceros agrestis HOM05D005074 ORTHO05D006853 3.6e-38 162.9 296 35.8
Oeu063389.1 Olea europaea HOM05D005074 ORTHO05D006853 6.2e-38 162.2 137 61.3
Pp3c11_18160 Physcomitrium patens HOM05D005074 ORTHO05D006853 2.4e-37 160.2 298 36.2
SMO119G0484 Selaginella moellendorffii HOM05D005074 ORTHO05D006853 9.9e-36 154.8 268 36.2
ECA236G3605 Erigeron canadensis HOM05D005074 ORTHO05D006853 7.3e-31 138.7 208 43.8
Aa31sc2673G10 Aethionema arabicum HOM05D005074 ORTHO05D006853 2.9e-27 126.7 247 33.6
Hma1.2p1_0501F.1_g167660 Hydrangea macrophylla HOM05D005074 ORTHO05D006853 1.9e-26 124.0 107 64.5
Glyma.U000501 Glycine max HOM05D005074 ORTHO05D006853 1.2e-25 121.3 153 52.3
Medtr1g024155 Medicago truncatula HOM05D005074 ORTHO05D006853 2.9e-19 100.1 82 67.1
Rhsim05G0219600 Rhododendron simsii HOM05D005074 ORTHO05D006853 2.1e-17 94.0 267 34.8
CBR_g45475 Chara braunii HOM05D005074 ORTHO05D006853 8.7e-16 88.6 172 32.0


User provided reference genes

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