Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G3169 Fragaria x ananassa HOM05D005494 ORTHO05D006689 1.9e-110 402.5 201 100.0
FAN04G1682 Fragaria x ananassa HOM05D005494 ORTHO05D006689 7.2e-102 374.0 190 97.9
FAN18G0952 Fragaria x ananassa HOM05D005494 ORTHO05D006689 4.3e-99 364.8 190 95.8
FAN13G0712 Fragaria x ananassa HOM05D005494 ORTHO05D006689 3.7e-98 361.7 208 89.4
RcHm_v2.0_Chr7g0180051 Rosa chinensis HOM05D005494 ORTHO05D006689 9.1e-97 357.1 190 93.7
Prupe.5G182300 Prunus persica HOM05D005494 ORTHO05D006689 7.0e-89 330.9 190 84.7
MD14G1189700 Malus domestica HOM05D005494 ORTHO05D006689 1.6e-85 319.7 190 81.6
Haze_07413 Corylus avellana HOM05D005494 ORTHO05D006689 1.0e-84 317.0 190 81.1
MD06G1183600 Malus domestica HOM05D005494 ORTHO05D006689 1.0e-84 317.0 190 81.6
MD14G1057100 Malus domestica HOM05D005494 ORTHO05D006689 1.0e-84 317.0 190 81.6
Cfa019036 Carpinus fangiana HOM05D005494 ORTHO05D006689 4.4e-83 311.6 190 80.0
QL10p014050 Quercus lobata HOM05D005494 ORTHO05D006689 4.5e-80 301.6 190 78.4
Phvul.004G010600 Phaseolus vulgaris HOM05D005494 ORTHO05D006689 1.7e-79 299.7 190 74.7
COL.COLO4_07634 Corchorus olitorius HOM05D005494 ORTHO05D006689 2.9e-79 298.9 190 77.9
Gohir.D12G177100 Gossypium hirsutum HOM05D005494 ORTHO05D006689 2.9e-79 298.9 190 76.8
VMungo0464G1007 Vigna mungo HOM05D005494 ORTHO05D006689 2.9e-79 298.9 190 75.8
CiPaw.11G034500 Carya illinoinensis HOM05D005494 ORTHO05D006689 3.8e-79 298.5 190 77.4
Gorai.008G189500 Gossypium raimondii HOM05D005494 ORTHO05D006689 3.8e-79 298.5 190 76.8
Glyma.05G004700 Glycine max HOM05D005494 ORTHO05D006689 2.5e-78 295.8 190 74.2
Duzib084G0032 Durio zibethinus HOM05D005494 ORTHO05D006689 5.5e-78 294.7 192 77.6
CANSAT80G2452 Cannabis sativa HOM05D005494 ORTHO05D006689 7.2e-78 294.3 190 76.8
Gohir.A12G174400 Gossypium hirsutum HOM05D005494 ORTHO05D006689 1.6e-77 293.1 190 75.8
vmacro19338 Vaccinium macrocarpon HOM05D005494 ORTHO05D006689 1.6e-77 293.1 190 76.8
Dinv07986 Davidia involucrata HOM05D005494 ORTHO05D006689 2.1e-77 292.7 191 77.5
FvH4_5g16020 Fragaria vesca HOM05D005494 ORTHO05D006689 2.1e-77 292.7 147 97.3
Thecc.10G120900 Theobroma cacao HOM05D005494 ORTHO05D006689 2.1e-77 292.7 190 77.9
Glyma.04G177200 Glycine max HOM05D005494 ORTHO05D006689 2.7e-77 292.4 190 73.2
Lalb_Chr08g0236101 Lupinus albus HOM05D005494 ORTHO05D006689 3.6e-77 292.0 190 74.2
Lj4g0024662 Lotus japonicus HOM05D005494 ORTHO05D006689 8.0e-77 290.8 190 73.7
Dinv13115 Davidia involucrata HOM05D005494 ORTHO05D006689 1.0e-76 290.4 190 76.8
Eucgr.B00382 Eucalyptus grandis HOM05D005494 ORTHO05D006689 1.0e-76 290.4 189 76.7
Sabra12G0052300 Salix brachista HOM05D005494 ORTHO05D006689 2.3e-76 289.3 189 74.1
Potri.012G073500 Populus trichocarpa HOM05D005494 ORTHO05D006689 3.0e-76 288.9 190 73.2
Ciclev10020622m.g Citrus clementina HOM05D005494 ORTHO05D006689 4.0e-76 288.5 191 76.4
Lj1g0011553 Lotus japonicus HOM05D005494 ORTHO05D006689 4.0e-76 288.5 190 72.6
ClCG01G014230 Citrullus lanatus HOM05D005494 ORTHO05D006689 5.2e-76 288.1 191 74.3
CSS0010415 Camellia sinensis var. sinensis HOM05D005494 ORTHO05D006689 2.6e-75 285.8 192 75.5
CSS0047784 Camellia sinensis var. sinensis HOM05D005494 ORTHO05D006689 2.6e-75 285.8 192 75.5
Sed0009281 Sechium edule HOM05D005494 ORTHO05D006689 2.6e-75 285.8 191 72.8
GSVIVG01008098001 Vitis vinifera HOM05D005494 ORTHO05D006689 2.6e-75 285.8 190 74.7
TAR629G2056 Trochodendron aralioides HOM05D005494 ORTHO05D006689 3.3e-75 285.4 194 72.7
Rhsim08G0163400 Rhododendron simsii HOM05D005494 ORTHO05D006689 5.7e-75 284.6 191 73.3
CsaV3_1G008090 Cucumis sativus L. HOM05D005494 ORTHO05D006689 4.8e-74 281.6 191 72.8
Ca_18065_v3 Cicer arietinum L. HOM05D005494 ORTHO05D006689 6.3e-74 281.2 190 71.1
Hma1.2p1_0572F.1_g181100 Hydrangea macrophylla HOM05D005494 ORTHO05D006689 8.2e-74 280.8 190 72.1
Atru.chr9.2369 Acer truncatum HOM05D005494 ORTHO05D006689 2.4e-73 279.3 190 73.2
Psat7g041440 Pisum sativum HOM05D005494 ORTHO05D006689 2.4e-73 279.3 190 71.1
Actinidia04945 Actinidia chinensis HOM05D005494 ORTHO05D006689 3.1e-73 278.9 190 73.2
Manes.14G072100 Manihot esculenta HOM05D005494 ORTHO05D006689 4.1e-73 278.5 190 73.7
Lalb_Chr07g0182421 Lupinus albus HOM05D005494 ORTHO05D006689 9.1e-73 277.3 190 71.6
TWI09G1329 Tripterygium wilfordii HOM05D005494 ORTHO05D006689 9.1e-73 277.3 190 70.0
arahy.Tifrunner.gnm1.ann1.QI1X69 Arachis hypogaea HOM05D005494 ORTHO05D006689 1.2e-72 276.9 189 70.9
arahy.Tifrunner.gnm1.ann1.Y2W2NU Arachis hypogaea HOM05D005494 ORTHO05D006689 2.0e-72 276.2 190 70.5
Nitab4.5_0000642g0180 Nicotiana tabacum HOM05D005494 ORTHO05D006689 7.7e-72 274.2 191 69.1
Hund09389 Selenicereus undatus HOM05D005494 ORTHO05D006689 2.2e-71 272.7 190 70.0
DCAR_026093 Daucus carota HOM05D005494 ORTHO05D006689 5.0e-71 271.6 190 71.6
Cc04_g16070 Coffea canephora HOM05D005494 ORTHO05D006689 6.5e-71 271.2 190 71.1
Nitab4.5_0009486g0030 Nicotiana tabacum HOM05D005494 ORTHO05D006689 6.5e-71 271.2 189 69.8
Oeu038310.1 Olea europaea HOM05D005494 ORTHO05D006689 1.9e-70 269.6 189 70.4
Cpa.g.sc30.67 Carica papaya HOM05D005494 ORTHO05D006689 3.2e-70 268.9 190 70.5
Nn3g17064 Nelumbo nucifera HOM05D005494 ORTHO05D006689 2.7e-69 265.8 194 66.5
Oeu039559.2 Olea europaea HOM05D005494 ORTHO05D006689 2.7e-69 265.8 190 70.0
MSTRG.9655 Avicennia marina HOM05D005494 ORTHO05D006689 6.1e-69 264.6 190 70.5
PGSC0003DMG400024571 Solanum tuberosum HOM05D005494 ORTHO05D006689 6.1e-69 264.6 190 67.4
SGA_v2.0_scaffold7G04099 Striga asiatica HOM05D005494 ORTHO05D006689 8.0e-69 264.2 190 70.5
TAR622G0530 Trochodendron aralioides HOM05D005494 ORTHO05D006689 8.0e-69 264.2 183 70.5
Solyc03g113610.4 Solanum lycopersicum HOM05D005494 ORTHO05D006689 1.0e-68 263.8 190 67.4
Oeu038311.1 Olea europaea HOM05D005494 ORTHO05D006689 1.4e-68 263.5 190 68.4
Peaxi162Scf00017g02118 Petunia axillaris HOM05D005494 ORTHO05D006689 1.4e-68 263.5 190 67.9
Sopen03g032650 Solanum pennellii HOM05D005494 ORTHO05D006689 1.4e-68 263.5 190 67.4
Psat7g079600 Pisum sativum HOM05D005494 ORTHO05D006689 6.8e-68 261.2 190 67.4
AUR62008313 Chenopodium quinoa HOM05D005494 ORTHO05D006689 3.4e-67 258.8 190 67.9
AUR62021784 Chenopodium quinoa HOM05D005494 ORTHO05D006689 9.8e-67 257.3 190 67.9
EL10Ac5g10874 Beta vulgaris HOM05D005494 ORTHO05D006689 1.7e-66 256.5 189 66.7
CAN.G999.3 Capsicum annuum HOM05D005494 ORTHO05D006689 6.3e-66 254.6 181 68.0
Thhalv10000203m.g Eutrema salsugineum HOM05D005494 ORTHO05D006689 9.1e-65 250.8 190 64.7
Sp6g32480 Schrenkiella parvula HOM05D005494 ORTHO05D006689 1.6e-64 250.0 189 65.1
AUR62022932 Chenopodium quinoa HOM05D005494 ORTHO05D006689 2.0e-64 249.6 190 66.3
Aa31LG3G16120 Aethionema arabicum HOM05D005494 ORTHO05D006689 2.7e-64 249.2 190 63.2
AT5G11010 Arabidopsis thaliana HOM05D005494 ORTHO05D006689 3.5e-64 248.8 190 63.2
Aqoxy3G03184 Aquilegia oxysepala HOM05D005494 ORTHO05D006689 4.5e-64 248.4 196 64.3
AL6G21610 Arabidopsis lyrata HOM05D005494 ORTHO05D006689 5.9e-64 248.1 190 62.6
Carub.0006s0951 Capsella rubella HOM05D005494 ORTHO05D006689 1.3e-63 246.9 190 63.2
HanXRQChr02g0045331 Helianthus annuus HOM05D005494 ORTHO05D006689 1.3e-63 246.9 190 63.7
THA.LOC104814121 Tarenaya hassleriana HOM05D005494 ORTHO05D006689 5.0e-63 245.0 190 63.2
CARHR202280 Cardamine hirsuta HOM05D005494 ORTHO05D006689 6.6e-63 244.6 192 65.1
PSO591G0251 Papaver somniferum HOM05D005494 ORTHO05D006689 1.5e-62 243.4 194 59.3
ATR0051G026 Amborella trichopoda HOM05D004526 ORTHO05D005548 4.2e-62 241.9 190 64.7
MELO3C002226.2 Cucumis melo HOM05D005494 ORTHO05D006689 4.2e-62 241.9 192 66.1
PSO832G2211 Papaver somniferum HOM05D005494 ORTHO05D006689 5.5e-62 241.5 194 59.8
Duzib205G0238 Durio zibethinus HOM05D005494 ORTHO05D006689 4.7e-61 238.4 191 66.0
THA.LOC104818279 Tarenaya hassleriana HOM05D005494 ORTHO05D006689 4.7e-61 238.4 190 61.6
HanXRQChr16g0516751 Helianthus annuus HOM05D005494 ORTHO05D006689 6.1e-61 238.0 191 62.3
unitig_8.g3614 Utricularia gibba HOM05D005494 ORTHO05D006689 1.8e-60 236.5 190 63.7
GSVIVG01008100001 Vitis vinifera HOM05D005494 ORTHO05D006689 2.3e-60 236.1 154 74.7
Medtr8g080140 Medicago truncatula HOM05D005494 ORTHO05D006689 4.0e-60 235.3 192 63.0
TPR.G17080 Trifolium pratense HOM05D005494 ORTHO05D006689 4.0e-60 235.3 193 62.7
Migut.N01938 Erythranthe guttata HOM05D005494 ORTHO05D006689 1.2e-59 233.8 190 64.2
Lsat_1_v5_gn_1_11340 Lactuca sativa HOM05D005494 ORTHO05D006689 3.7e-58 228.8 195 61.0
SHI07761 Sapria himalayana HOM05D005494 ORTHO05D006689 4.9e-58 228.4 190 63.7
CDE02G1640 Ceratophyllum demersum HOM05D005494 ORTHO05D006689 8.3e-58 227.6 198 59.6
Sc12g0005890 Simmondsia chinensis HOM05D005494 ORTHO05D006689 8.3e-58 227.6 177 65.0
Sc12g0005880 Simmondsia chinensis HOM05D005494 ORTHO05D006689 1.4e-57 226.9 182 63.7
Medtr8g080150 Medicago truncatula HOM05D005494 ORTHO05D006689 1.8e-57 226.5 190 63.2
HPP92_008786 Vanilla planifolia HOM05D005494 ORTHO05D006689 1.6e-56 223.4 194 58.8
Lj5C118G23 Lonicera japonica HOM05D005494 ORTHO05D006689 5.9e-56 221.5 152 70.4
BcaC04g19267 Brassica carinata HOM05D005494 ORTHO05D006689 1.0e-55 220.7 190 58.9
A10p26670 Brassica napus HOM05D005494 ORTHO05D006689 2.9e-55 219.2 190 58.4
C09p65840 Brassica napus HOM05D005494 ORTHO05D006689 2.9e-55 219.2 190 58.4
Migut.D01889 Erythranthe guttata HOM05D005494 ORTHO05D006689 5.0e-55 218.4 189 60.8
Glyma.19G005300 Glycine max HOM05D005494 ORTHO05D006689 2.5e-54 216.1 137 75.9
Os01g0184000 Oryza sativa ssp. japonica HOM05D005494 ORTHO05D006689 2.5e-54 216.1 193 56.5
Zm00001eb121920 Zea mays HOM05D005494 ORTHO05D006689 2.8e-53 212.6 192 56.2
SEGI_00948 Sequoiadendron giganteum HOM05D005494 ORTHO05D006689 1.4e-52 210.3 194 54.6
ECA247G2071 Erigeron canadensis HOM05D005494 ORTHO05D006689 2.3e-52 209.5 190 57.9
Aa31LG10G14040 Aethionema arabicum HOM05D005494 ORTHO05D006689 1.4e-49 200.3 182 56.6
Phvul.009G054101 Phaseolus vulgaris HOM05D005494 ORTHO05D006689 1.7e-47 193.4 122 73.8
Lsat_1_v5_gn_5_17360 Lactuca sativa HOM05D005494 ORTHO05D006689 6.6e-47 191.4 190 51.1
AUR62012293 Chenopodium quinoa HOM05D005494 ORTHO05D006689 2.0e-43 179.9 190 53.7
BolC9t59405H Brassica oleracea HOM05D005494 ORTHO05D006689 9.8e-43 177.6 150 60.0
HPP92_006463 Vanilla planifolia HOM05D005494 ORTHO05D006689 2.3e-36 156.4 192 40.6
Os01g0354700 Oryza sativa ssp. japonica HOM05D005494 ORTHO05D006689 6.4e-34 148.3 196 37.8
Mapoly0002s0051 Marchantia polymorpha HOM05D005494 ORTHO05D006689 9.2e-33 144.4 200 41.0
Pp3c4_400 Physcomitrium patens HOM05D005494 ORTHO05D006689 1.5e-30 137.1 198 38.9
Thhalv10015920m.g Eutrema salsugineum HOM05D005494 ORTHO05D006689 7.8e-24 114.8 130 50.0
VMungo1309G1734 Vigna mungo HOM05D005494 ORTHO05D006689 1.9e-22 110.2 87 65.5
MBI06_g04707_MAGBIO Magnolia biondii HOM05D002360 ORTHO05D006689 6.9e-20 101.7 73 65.8
Lj5A118T79 Lonicera japonica HOM05D005494 ORTHO05D006689 1.2e-11 74.3 46 80.4
AagrBONN_evm.TU.Sc2ySwM_344.720 Anthoceros agrestis HOM05D005494 ORTHO05D006689 5.4e-09 65.5 127 33.1


User provided reference genes

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