Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN03G1187 Fragaria x ananassa HOM05D002650 ORTHO05D002924 9.5e-144 513.5 252 100.0
FAN06G5007 Fragaria x ananassa HOM05D002650 ORTHO05D002924 1.0e-60 237.7 125 95.2
FvH4_6g26790 Fragaria vesca HOM05D002650 ORTHO05D002924 4.5e-53 212.2 125 88.0
FAN14G0746 Fragaria x ananassa HOM05D002650 ORTHO05D002924 4.5e-53 212.2 125 88.0
RcHm_v2.0_Chr2g0168661 Rosa chinensis HOM05D002650 ORTHO05D002924 2.2e-52 209.9 125 84.8
FAN05G0367 Fragaria x ananassa HOM05D002650 ORTHO05D002924 1.9e-51 206.8 121 86.8
FAN02G3124 Fragaria x ananassa HOM05D002650 ORTHO05D002924 2.1e-50 203.4 125 84.8
FvH4_7g07700 Fragaria vesca HOM05D002650 ORTHO05D002924 1.2e-45 187.6 97 95.9
Prupe.3G268500 Prunus persica HOM05D002650 ORTHO05D002924 5.9e-45 185.3 127 77.2
TAR629G3266 Trochodendron aralioides HOM05D002650 ORTHO05D002924 7.7e-45 184.9 127 74.0
QL11p025200 Quercus lobata HOM05D002650 ORTHO05D002924 2.5e-43 179.9 127 73.2
CiPaw.04G017900 Carya illinoinensis HOM05D002650 ORTHO05D002924 2.1e-42 176.8 130 70.8
QL01p016137 Quercus lobata HOM05D002650 ORTHO05D002924 3.6e-42 176.0 122 74.6
MD17G1050500 Malus domestica HOM05D002650 ORTHO05D002924 4.7e-42 175.6 136 66.2
Cfa007541 Carpinus fangiana HOM05D002650 ORTHO05D002924 6.1e-42 175.3 127 70.9
Haze_14545 Corylus avellana HOM05D002650 ORTHO05D002924 6.1e-42 175.3 127 70.9
Ciclev10011090m.g Citrus clementina HOM05D002650 ORTHO05D002924 3.0e-41 172.9 129 69.8
CANSAT64G1048 Cannabis sativa HOM05D002650 ORTHO05D002924 4.0e-41 172.6 127 68.5
Dinv19048 Davidia involucrata HOM05D002650 ORTHO05D002924 4.0e-41 172.6 119 73.1
Sc07g0004540 Simmondsia chinensis HOM05D002650 ORTHO05D002924 4.0e-41 172.6 127 68.5
Sc07g0004550 Simmondsia chinensis HOM05D002650 ORTHO05D002924 4.0e-41 172.6 127 68.5
TAR629G2089 Trochodendron aralioides HOM05D002650 ORTHO05D002924 5.2e-41 172.2 113 77.9
Actinidia06482 Actinidia chinensis HOM05D002650 ORTHO05D002924 2.0e-40 170.2 119 75.6
Gorai.006G017900 Gossypium raimondii HOM05D002650 ORTHO05D002924 2.6e-40 169.9 127 66.9
Actinidia26587 Actinidia chinensis HOM05D002650 ORTHO05D002924 3.4e-40 169.5 119 75.6
Thecc.04G080400 Theobroma cacao HOM05D002650 ORTHO05D002924 4.4e-40 169.1 115 73.9
Gohir.D09G015700 Gossypium hirsutum HOM05D002650 ORTHO05D002924 9.8e-40 167.9 125 67.2
ECA238G2441 Erigeron canadensis HOM05D002650 ORTHO05D002924 1.7e-39 167.2 120 69.2
Eucgr.E04299 Eucalyptus grandis HOM05D002650 ORTHO05D002924 3.7e-39 166.0 131 66.4
Cc07_g13230 Coffea canephora HOM05D002650 ORTHO05D002924 8.3e-39 164.9 127 67.7
Duzib147G0083 Durio zibethinus HOM05D002650 ORTHO05D002924 8.3e-39 164.9 127 66.1
Sed0002537 Sechium edule HOM05D002650 ORTHO05D002924 8.3e-39 164.9 112 74.1
HanXRQChr16g0529961 Helianthus annuus HOM05D002650 ORTHO05D002924 4.1e-38 162.5 121 68.6
HanXRQChr07g0191751 Helianthus annuus HOM05D002650 ORTHO05D002924 9.1e-38 161.4 121 67.8
Lj4P259T23 Lonicera japonica HOM05D002650 ORTHO05D002924 2.0e-37 160.2 113 73.5
Rhsim10G0180200 Rhododendron simsii HOM05D002650 ORTHO05D002924 2.0e-37 160.2 127 67.7
Migut.D02453 Erythranthe guttata HOM05D002650 ORTHO05D002924 3.5e-37 159.5 127 65.4
Atru.chr8.143 Acer truncatum HOM05D002650 ORTHO05D002924 5.9e-37 158.7 128 65.6
Lsat_1_v5_gn_2_68300 Lactuca sativa HOM05D002650 ORTHO05D002924 5.9e-37 158.7 127 64.6
Migut.D02508 Erythranthe guttata HOM05D002650 ORTHO05D002924 7.7e-37 158.3 127 64.6
MELO3C021203.2 Cucumis melo HOM05D002650 ORTHO05D002924 1.0e-36 157.9 114 71.9
PGR142G0615 Punica granatum HOM05D002650 ORTHO05D002924 1.0e-36 157.9 136 62.5
QL12p000968 Quercus lobata HOM05D002650 ORTHO05D002924 1.3e-36 157.5 93 79.6
CsaV3_6G000630 Cucumis sativus L. HOM05D002650 ORTHO05D002924 2.3e-36 156.8 96 78.1
TPR.G21390 Trifolium pratense HOM05D002650 ORTHO05D002924 2.9e-36 156.4 125 62.4
Gohir.A09G017050 Gossypium hirsutum HOM05D002650 ORTHO05D002924 3.8e-36 156.0 127 63.0
MBI06_g06491_MAGBIO Magnolia biondii HOM05D002650 ORTHO05D002924 3.8e-36 156.0 116 68.1
COL.COLO4_33292 Corchorus olitorius HOM05D002650 ORTHO05D002924 5.0e-36 155.6 113 68.1
Aqoxy3G03365 Aquilegia oxysepala HOM05D002650 ORTHO05D002924 6.6e-36 155.2 126 63.5
PSO832G1866 Papaver somniferum HOM05D002650 ORTHO05D002924 1.5e-35 154.1 113 67.3
MBI05_g08280_MAGBIO Magnolia biondii HOM05D002650 ORTHO05D002924 3.3e-35 152.9 113 67.3
Glyma.13G063500 Glycine max HOM05D002650 ORTHO05D002924 1.2e-34 151.0 144 56.2
Nitab4.5_0011135g0030 Nicotiana tabacum HOM05D002650 ORTHO05D002924 1.6e-34 150.6 109 69.7
Oeu005234.1 Olea europaea HOM05D002650 ORTHO05D002924 2.1e-34 150.2 113 66.4
Hund15391 Selenicereus undatus HOM05D002650 ORTHO05D002924 2.1e-34 150.2 113 69.9
Peaxi162Scf00464g00317 Petunia axillaris HOM05D002650 ORTHO05D002924 2.8e-34 149.8 104 72.1
Nitab4.5_0006562g0040 Nicotiana tabacum HOM05D002650 ORTHO05D002924 3.6e-34 149.4 109 69.7
Lalb_Chr02g0159671 Lupinus albus HOM05D002650 ORTHO05D002924 1.8e-33 147.1 138 57.2
PSO675G8623 Papaver somniferum HOM05D002650 ORTHO05D002924 2.3e-33 146.7 113 64.6
arahy.Tifrunner.gnm1.ann1.J8Q99B Arachis hypogaea HOM05D002650 ORTHO05D002924 4.0e-33 146.0 143 54.5
vmacro20586 Vaccinium macrocarpon HOM05D002650 ORTHO05D002924 4.0e-33 146.0 109 69.7
ATR0564G515 Amborella trichopoda HOM05D002650 ORTHO05D002924 5.2e-33 145.6 109 67.9
DCAR_001980 Daucus carota HOM05D002650 ORTHO05D002924 5.2e-33 145.6 109 68.8
EL10Ac6g14001 Beta vulgaris HOM05D002650 ORTHO05D002924 8.9e-33 144.8 114 65.8
Aqoxy3G00648 Aquilegia oxysepala HOM05D002650 ORTHO05D002924 1.2e-32 144.4 124 58.1
AUR62032466 Chenopodium quinoa HOM05D002650 ORTHO05D002924 1.2e-32 144.4 113 66.4
AUR62044728 Chenopodium quinoa HOM05D002650 ORTHO05D002924 1.2e-32 144.4 109 67.9
Manes.01G090100 Manihot esculenta HOM05D002650 ORTHO05D002924 1.2e-32 144.4 111 65.8
Oeu064759.1 Olea europaea HOM05D002650 ORTHO05D002924 1.2e-32 144.4 112 65.2
BraA04t16915Z Brassica rapa HOM05D002650 ORTHO05D002924 2.0e-32 143.7 116 64.7
Thhalv10027648m.g Eutrema salsugineum HOM05D002650 ORTHO05D002924 2.0e-32 143.7 127 59.1
A04p12540 Brassica napus HOM05D002650 ORTHO05D002924 3.4e-32 142.9 116 64.7
C04p46280 Brassica napus HOM05D002650 ORTHO05D002924 3.4e-32 142.9 116 64.7
SHI06833 Sapria himalayana HOM05D002650 ORTHO05D002924 4.4e-32 142.5 115 63.5
BcaB06g27380 Brassica carinata HOM05D002650 ORTHO05D002924 5.7e-32 142.1 115 64.3
HPP92_004328 Vanilla planifolia HOM05D002650 ORTHO05D002924 5.7e-32 142.1 128 58.6
arahy.Tifrunner.gnm1.ann1.KZ49VN Arachis hypogaea HOM05D002650 ORTHO05D002924 7.5e-32 141.7 98 69.4
TWI60G0183 Tripterygium wilfordii HOM05D002650 ORTHO05D002924 7.5e-32 141.7 137 56.2
BolC4t26212H Brassica oleracea HOM05D002650 ORTHO05D002924 9.8e-32 141.4 116 63.8
Sp7g02220 Schrenkiella parvula HOM05D002650 ORTHO05D002924 1.3e-31 141.0 114 63.2
PGSC0003DMG400013241 Solanum tuberosum HOM05D002650 ORTHO05D002924 1.7e-31 140.6 94 73.4
Psat1g074520 Pisum sativum HOM05D002650 ORTHO05D002924 2.8e-31 139.8 144 52.1
Phvul.004G028100 Phaseolus vulgaris HOM05D002650 ORTHO05D002924 4.9e-31 139.0 141 53.2
Potri.017G081900 Populus trichocarpa HOM05D002650 ORTHO05D002924 4.9e-31 139.0 135 57.8
AT5G39840 Arabidopsis thaliana HOM05D002650 ORTHO05D002924 6.3e-31 138.7 121 62.0
Solyc11g011460.2 Solanum lycopersicum HOM05D002650 ORTHO05D002924 6.3e-31 138.7 87 78.2
Sopen11g006250 Solanum pennellii HOM05D002650 ORTHO05D002924 6.3e-31 138.7 87 78.2
Glyma.19G021800 Glycine max HOM05D002650 ORTHO05D002924 8.3e-31 138.3 138 55.1
SGA_v2.0_scaffold21G09475 Striga asiatica HOM05D002650 ORTHO05D002924 1.1e-30 137.9 105 64.8
CARHR262390 Cardamine hirsuta HOM05D002650 ORTHO05D002924 1.4e-30 137.5 120 57.5
TPR.G3004 Trifolium pratense HOM05D002650 ORTHO05D002924 1.4e-30 137.5 114 62.3
Lj2g0025076 Lotus japonicus HOM05D002650 ORTHO05D002924 2.4e-30 136.7 92 70.7
Aa31LG9G16330 Aethionema arabicum HOM05D002650 ORTHO05D002924 3.2e-30 136.3 114 62.3
AL7G50400 Arabidopsis lyrata HOM05D002650 ORTHO05D002924 3.2e-30 136.3 120 57.5
CAN.G222.61 Capsicum annuum HOM05D002650 ORTHO05D002924 4.1e-30 136.0 103 68.0
Cpa.g.sc170.53 Carica papaya HOM05D002650 ORTHO05D002924 4.1e-30 136.0 91 69.2
unitig_736.g22345 Utricularia gibba HOM05D002650 ORTHO05D002924 9.2e-30 134.8 125 56.0
VMungo0464G0369 Vigna mungo HOM05D002650 ORTHO05D002924 2.7e-29 133.3 103 66.0
Os04g0459800 Oryza sativa ssp. japonica HOM05D002650 ORTHO05D002924 3.5e-29 132.9 145 49.0
SEGI_33056 Sequoiadendron giganteum HOM05D002650 ORTHO05D002924 3.5e-29 132.9 109 62.4
Sabra17G0072900 Salix brachista HOM05D002650 ORTHO05D002924 2.3e-28 130.2 121 59.5
Ca_20736_v3 Cicer arietinum L. HOM05D002650 ORTHO05D002924 2.9e-28 129.8 127 53.5
Carub.0007s3589 Capsella rubella HOM05D002650 ORTHO05D002924 8.6e-28 128.3 117 56.4
CDE04G1324 Ceratophyllum demersum HOM05D002650 ORTHO05D002924 2.5e-27 126.7 103 62.1
CDE07G1280 Ceratophyllum demersum HOM05D002650 ORTHO05D002924 4.3e-27 125.9 135 52.6
Medtr6g011800 Medicago truncatula HOM05D002650 ORTHO05D002924 5.6e-27 125.6 130 51.5
Zm00001eb080820 Zea mays HOM05D002650 ORTHO05D002924 3.6e-26 122.9 88 65.9
Lj4C412G7 Lonicera japonica HOM05D002650 ORTHO05D002924 2.9e-23 113.2 74 71.6
Zm00001eb424140 Zea mays HOM05D002650 ORTHO05D002924 3.3e-19 99.8 87 51.7
Zm00001eb424180 Zea mays HOM05D002650 ORTHO05D002924 3.3e-19 99.8 87 51.7
Pp3c11_24680 Physcomitrium patens HOM05D002650 ORTHO05D002924 8.9e-17 91.7 97 50.5
Mapoly0052s0044 Marchantia polymorpha HOM05D002650 ORTHO05D002924 2.0e-16 90.5 89 48.3
GSVIVG01011395001 Vitis vinifera HOM05D002650 ORTHO05D002924 1.1e-14 84.7 73 60.3
SMO356G0765 Selaginella moellendorffii HOM05D002650 ORTHO05D002924 2.7e-13 80.1 100 39.0
AagrBONN_evm.TU.Sc2ySwM_117.4074 Anthoceros agrestis HOM05D002650 ORTHO05D002924 2.5e-11 73.6 77 49.4
Medtr3g013680 Medicago truncatula HOM05D002650 ORTHO05D002924 3.3e-11 73.2 62 56.5
Nitab4.5_0001048g0080 Nicotiana tabacum HOM05D002650 ORTHO05D002924 1.4e-09 67.8 43 76.7
TAR622G0591 Trochodendron aralioides HOM05D002650 ORTHO05D002924 1.5e-08 64.3 60 60.0
QL02p024732 Quercus lobata HOM05D002650 ORTHO05D002924 2.6e-08 63.5 107 41.1


User provided reference genes

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