Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G1202 Fragaria x ananassa HOM05D004664 ORTHO05D005526 5.0e-300 1033.9 609 100.0
FAN14G0080 Fragaria x ananassa HOM05D004664 ORTHO05D005526 1.9e-283 978.8 624 88.6
FvH4_6g39210 Fragaria vesca HOM05D004664 ORTHO05D005526 4.4e-272 941.0 624 85.9
RcHm_v2.0_Chr2g0153021 Rosa chinensis HOM05D004664 ORTHO05D005526 1.2e-237 826.6 626 82.3
FAN05G0490 Fragaria x ananassa HOM05D004664 ORTHO05D005526 3.9e-236 821.6 610 73.3
Prupe.3G183500 Prunus persica HOM05D004664 ORTHO05D005526 5.6e-158 562.0 589 52.5
RcHm_v2.0_Chr7g0230211 Rosa chinensis HOM05D004664 ORTHO05D005526 7.9e-152 541.6 614 52.6
FAN18G2840 Fragaria x ananassa HOM05D004664 ORTHO05D005526 1.9e-150 537.0 600 51.8
MD17G1131000 Malus domestica HOM05D004664 ORTHO05D005526 9.6e-150 534.6 585 53.8
QL05p066226 Quercus lobata HOM05D004664 ORTHO05D005526 3.1e-140 503.1 590 48.3
CiPaw.05G165700 Carya illinoinensis HOM05D004664 ORTHO05D005526 8.2e-133 478.4 599 46.4
Haze_07058 Corylus avellana HOM05D004664 ORTHO05D005526 2.4e-132 476.9 610 47.7
CANSAT64G2239 Cannabis sativa HOM05D004664 ORTHO05D005526 3.6e-128 463.0 594 50.2
Duzib268G1219 Durio zibethinus HOM05D004664 ORTHO05D005526 6.7e-127 458.8 591 45.7
Thecc.08G197000 Theobroma cacao HOM05D004664 ORTHO05D005526 8.7e-127 458.4 584 44.7
TAR636G0408 Trochodendron aralioides HOM05D004664 ORTHO05D005526 8.7e-127 458.4 585 44.6
Manes.08G015000 Manihot esculenta HOM05D004664 ORTHO05D005526 7.4e-126 455.3 599 43.6
PGR004G1760 Punica granatum HOM05D004664 ORTHO05D005526 8.2e-125 451.8 587 48.0
Gohir.D05G311400 Gossypium hirsutum HOM05D004664 ORTHO05D005526 1.8e-124 450.7 589 43.6
Gorai.009G332500 Gossypium raimondii HOM05D004664 ORTHO05D005526 5.3e-124 449.1 589 43.5
Gohir.A05G310600 Gossypium hirsutum HOM05D004664 ORTHO05D005526 1.2e-123 448.0 590 43.6
Dinv11048 Davidia involucrata HOM05D004664 ORTHO05D005526 6.5e-122 442.2 584 43.5
Potri.015G143000 Populus trichocarpa HOM05D004664 ORTHO05D005526 1.4e-121 441.0 591 42.8
COL.COLO4_20401 Corchorus olitorius HOM05D004664 ORTHO05D005526 9.4e-121 438.3 589 43.3
TAR633G0600 Trochodendron aralioides HOM05D004664 ORTHO05D005526 2.7e-120 436.8 591 42.8
Sabra08G0019200 Salix brachista HOM05D004664 ORTHO05D005526 5.1e-119 432.6 591 41.6
Eucgr.D00971 Eucalyptus grandis HOM05D004664 ORTHO05D005526 6.7e-119 432.2 325 62.5
TWI63G0464 Tripterygium wilfordii HOM05D004664 ORTHO05D005526 8.8e-119 431.8 588 42.5
Dinv01695 Davidia involucrata HOM05D004664 ORTHO05D005526 2.0e-118 430.6 591 42.8
TWI38G1364 Tripterygium wilfordii HOM05D004664 ORTHO05D005526 9.7e-118 428.3 605 42.6
Atru.chr1.2210 Acer truncatum HOM05D004664 ORTHO05D005526 1.3e-117 427.9 589 41.3
CSS0003336 Camellia sinensis var. sinensis HOM05D004664 ORTHO05D005526 3.7e-117 426.4 330 60.3
PSO541G3178 Papaver somniferum HOM05D004664 ORTHO05D005526 3.7e-117 426.4 589 41.9
PSO675G1009 Papaver somniferum HOM05D004664 ORTHO05D005526 8.2e-117 425.2 589 41.3
Migut.H01639 Erythranthe guttata HOM05D004664 ORTHO05D005526 1.9e-113 414.1 593 40.5
Glyma.07G270100 Glycine max HOM05D004664 ORTHO05D005526 9.4e-113 411.8 589 41.6
Cpa.g.sc27.187 Carica papaya HOM05D004664 ORTHO05D005526 1.2e-112 411.4 590 41.7
Lj6g0004292 Lotus japonicus HOM05D004664 ORTHO05D005526 2.7e-112 410.2 589 40.6
MBI15_g26850_MAGBIO Magnolia biondii HOM05D004664 ORTHO05D005526 2.7e-112 410.2 593 44.5
Hma1.2p1_0277F.1_g111600 Hydrangea macrophylla HOM05D004664 ORTHO05D005526 6.1e-112 409.1 597 41.0
MELO3C021804.2 Cucumis melo HOM05D004664 ORTHO05D005526 1.8e-111 407.5 587 40.5
VMungo1215G0123 Vigna mungo HOM05D004664 ORTHO05D005526 2.3e-111 407.1 590 41.2
Nn1g08288 Nelumbo nucifera HOM05D004664 ORTHO05D005526 3.9e-111 406.4 267 68.2
Phvul.003G154500 Phaseolus vulgaris HOM05D004664 ORTHO05D005526 2.6e-110 403.7 589 40.7
MELO3C017782.2 Cucumis melo HOM05D004664 ORTHO05D005526 7.4e-110 402.1 599 40.1
Lj4g0012990 Lotus japonicus HOM05D004664 ORTHO05D005526 4.8e-109 399.4 589 40.1
GSVIVG01004332001 Vitis vinifera HOM05D004664 ORTHO05D005526 1.1e-108 398.3 243 72.0
Oeu016938.2 Olea europaea HOM05D004664 ORTHO05D005526 1.8e-108 397.5 361 54.6
Psat0s2550g0080 Pisum sativum HOM05D004664 ORTHO05D005526 3.1e-108 396.7 591 39.9
Sc25g0005660 Simmondsia chinensis HOM05D004664 ORTHO05D005526 3.1e-108 396.7 586 42.0
GSVIVG01002826001 Vitis vinifera HOM05D004664 ORTHO05D005526 4.1e-108 396.4 243 72.0
CiPaw.09G112800 Carya illinoinensis HOM05D004664 ORTHO05D005526 2.0e-107 394.0 267 67.8
Ciclev10015263m.g Citrus clementina HOM05D004664 ORTHO05D005526 2.6e-107 393.7 579 40.1
CsaV3_1G046480 Cucumis sativus L. HOM05D004664 ORTHO05D005526 2.6e-107 393.7 587 39.9
SGA_v2.0_scaffold239G43984 Striga asiatica HOM05D004664 ORTHO05D005526 3.5e-107 393.3 592 39.4
arahy.Tifrunner.gnm1.ann1.6YF458 Arachis hypogaea HOM05D004664 ORTHO05D005526 8.5e-106 388.7 590 38.3
arahy.Tifrunner.gnm1.ann1.U25ASJ Arachis hypogaea HOM05D004664 ORTHO05D005526 1.9e-105 387.5 590 38.3
TPR.G5994 Trifolium pratense HOM05D004664 ORTHO05D005526 2.5e-105 387.1 591 38.2
Cc07_g14650 Coffea canephora HOM05D004664 ORTHO05D005526 1.6e-104 384.4 595 38.8
Lalb_Chr04g0264741 Lupinus albus HOM05D004664 ORTHO05D005526 6.7e-103 379.0 587 38.5
Sopen10g004780 Solanum pennellii HOM05D004664 ORTHO05D005526 6.7e-103 379.0 588 38.1
vmacro21384 Vaccinium macrocarpon HOM05D004664 ORTHO05D005526 6.7e-103 379.0 598 41.3
CAN.G413.16 Capsicum annuum HOM05D004664 ORTHO05D005526 8.8e-103 378.6 588 37.9
Medtr1g043000 Medicago truncatula HOM05D004664 ORTHO05D005526 8.8e-103 378.6 596 38.9
Rhsim06G0067400 Rhododendron simsii HOM05D004664 ORTHO05D005526 8.8e-103 378.6 646 46.0
Aqoxy1G03457 Aquilegia oxysepala HOM05D004664 ORTHO05D005526 1.5e-102 377.9 583 39.5
Medtr4g134340 Medicago truncatula HOM05D004664 ORTHO05D005526 4.4e-102 376.3 597 38.2
ClCG01G009110 Citrullus lanatus HOM05D004664 ORTHO05D005526 7.5e-102 375.6 360 53.9
CAN.G567.108 Capsicum annuum HOM05D004664 ORTHO05D005526 1.3e-101 374.8 584 39.4
Sed0026896 Sechium edule HOM05D004664 ORTHO05D005526 1.3e-101 374.8 356 53.1
Peaxi162Scf00530g00824 Petunia axillaris HOM05D004664 ORTHO05D005526 1.1e-100 371.7 291 58.1
ATR0751G240 Amborella trichopoda HOM05D004664 ORTHO05D005526 9.1e-100 368.6 311 56.9
Hund19039 Selenicereus undatus HOM05D004664 ORTHO05D005526 1.6e-99 367.9 583 38.9
ECA238G0224 Erigeron canadensis HOM05D004664 ORTHO05D005526 2.7e-99 367.1 592 38.7
Nitab4.5_0003942g0040 Nicotiana tabacum HOM05D004664 ORTHO05D005526 3.5e-99 366.7 299 57.5
CDE04G0808 Ceratophyllum demersum HOM05D004664 ORTHO05D005526 7.2e-97 359.0 583 40.0
Medtr8g042940 Medicago truncatula HOM05D004664 ORTHO05D005526 7.2e-97 359.0 315 55.6
Carub.0004s0328 Capsella rubella HOM05D004664 ORTHO05D005526 3.6e-96 356.7 583 38.6
AUR62028851 Chenopodium quinoa HOM05D004664 ORTHO05D005526 3.6e-96 356.7 590 37.5
HanXRQChr15g0489541 Helianthus annuus HOM05D004664 ORTHO05D005526 4.7e-96 356.3 594 38.7
unitig_22.g5707 Utricularia gibba HOM05D004664 ORTHO05D005526 1.8e-95 354.4 324 52.5
BcaC01g00070 Brassica carinata HOM05D004664 ORTHO05D005526 6.8e-95 352.4 593 38.3
Carub.0001s2702 Capsella rubella HOM05D004664 ORTHO05D005526 6.8e-95 352.4 332 55.4
BolC3t19796H Brassica oleracea HOM05D004664 ORTHO05D005526 1.2e-94 351.7 599 37.9
Solyc10g009000.4 Solanum lycopersicum HOM05D004664 ORTHO05D005526 1.5e-94 351.3 588 36.9
C03p75380 Brassica napus HOM05D004664 ORTHO05D005526 2.6e-94 350.5 599 37.9
SEGI_33972 Sequoiadendron giganteum HOM05D004664 ORTHO05D005526 2.2e-93 347.4 326 53.1
AL1G42190 Arabidopsis lyrata HOM05D004664 ORTHO05D005526 2.4e-92 344.0 311 55.3
BcaB03g12095 Brassica carinata HOM05D004664 ORTHO05D005526 2.4e-92 344.0 590 37.3
Lsat_1_v5_gn_4_109780 Lactuca sativa HOM05D004664 ORTHO05D005526 3.1e-92 343.6 596 37.1
PGSC0003DMG400022830 Solanum tuberosum HOM05D004664 ORTHO05D005526 1.6e-91 341.3 244 60.7
Thhalv10008005m.g Eutrema salsugineum HOM05D004664 ORTHO05D005526 4.5e-91 339.7 324 54.0
AT1G28560 Arabidopsis thaliana HOM05D004664 ORTHO05D005526 1.7e-90 337.8 311 54.7
Lj6A128T19 Lonicera japonica HOM05D004664 ORTHO05D005526 2.3e-90 337.4 258 60.9
Ah.04g149850 Amaranthus hybridus HOM05D000997 ORTHO05D000828 3.8e-90 336.7 558 40.1
THA.LOC104809221 Tarenaya hassleriana HOM05D004664 ORTHO05D005526 3.8e-90 336.7 587 37.5
EL10Ac3g07399 Beta vulgaris HOM05D004664 ORTHO05D005526 8.6e-90 335.5 589 37.5
AUR62005705 Chenopodium quinoa HOM05D004664 ORTHO05D005526 9.5e-89 332.0 590 36.6
A08p25430 Brassica napus HOM05D004664 ORTHO05D005526 1.6e-88 331.3 620 35.5
BraA08t34494Z Brassica rapa HOM05D004664 ORTHO05D005526 1.6e-88 331.3 618 35.1
Aa31LG6G11170 Aethionema arabicum HOM05D004664 ORTHO05D005526 1.2e-86 325.1 586 37.7
THA.LOC104803679 Tarenaya hassleriana HOM05D004664 ORTHO05D005526 2.6e-86 323.9 596 36.1
Nitab4.5_0009068g0020 Nicotiana tabacum HOM05D004664 ORTHO05D005526 2.7e-83 313.9 615 34.1
Sabra15G0152800 Salix brachista HOM05D007457 ORTHO05D006729 2.9e-82 310.5 518 37.6
DCAR_024762 Daucus carota HOM05D004664 ORTHO05D005526 6.6e-82 309.3 616 37.7
Os01g0912600 Oryza sativa ssp. japonica HOM05D004664 ORTHO05D005526 3.3e-81 307.0 263 55.5
Actinidia04550 Actinidia chinensis HOM05D004664 ORTHO05D005526 1.8e-76 291.2 240 57.9
CARHR028060 Cardamine hirsuta HOM05D004664 ORTHO05D005526 1.2e-75 288.5 583 34.8
DCAR_031515 Daucus carota HOM05D004664 ORTHO05D005526 2.1e-72 277.7 312 46.5
Cc09_g09390 Coffea canephora HOM05D004664 ORTHO05D005526 2.8e-72 277.3 199 62.3
Actinidia28954 Actinidia chinensis HOM05D004664 ORTHO05D005526 1.1e-71 275.4 484 38.0
Lj1A1166T78 Lonicera japonica HOM05D004664 ORTHO05D005526 1.1e-71 275.4 253 51.4
Mapoly0028s0050 Marchantia polymorpha HOM05D004664 ORTHO05D005526 1.4e-71 275.0 313 45.0
ECA238G4413 Erigeron canadensis HOM05D004664 ORTHO05D005526 1.8e-71 274.6 578 35.6
Sp5g19680 Schrenkiella parvula HOM05D004664 ORTHO05D005526 1.4e-68 265.0 310 46.8
AagrBONN_evm.TU.Sc2ySwM_117.2257 Anthoceros agrestis HOM05D004664 ORTHO05D005526 1.9e-68 264.6 249 49.8
ECA247G2196 Erigeron canadensis HOM05D004664 ORTHO05D005526 4.6e-67 260.0 519 34.9
Ca_04223_v3 Cicer arietinum L. HOM05D004664 ORTHO05D005526 1.0e-66 258.8 497 36.6
Pp3c2_3010 Physcomitrium patens HOM05D004664 ORTHO05D005526 1.3e-61 241.9 311 39.5
Sp1g24810 Schrenkiella parvula HOM05D004664 ORTHO05D005526 1.1e-60 238.8 183 59.6
Actinidia19274 Actinidia chinensis HOM05D004664 ORTHO05D005526 1.9e-60 238.0 203 51.7
arahy.Tifrunner.gnm1.ann1.3Z2F0I Arachis hypogaea HOM05D004664 ORTHO05D005526 2.7e-59 234.2 587 30.8
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 1.3e-58 231.9 565 32.4
Medtr4g064230 Medicago truncatula HOM05D004664 ORTHO05D005526 1.5e-57 228.4 494 32.8
Aqoxy5G01821 Aquilegia oxysepala HOM05D004664 ORTHO05D005526 1.5e-49 201.8 476 31.9
Cfa002678 Carpinus fangiana HOM05D004664 ORTHO05D005526 8.1e-48 196.1 416 36.8
Aqoxy1G03234 Aquilegia oxysepala HOM05D004664 ORTHO05D005526 2.2e-45 188.0 133 60.2
ECA238G2574 Erigeron canadensis HOM05D004664 ORTHO05D005526 3.0e-42 177.6 279 38.4
SMO358G0740 Selaginella moellendorffii HOM05D004664 ORTHO05D005526 1.5e-38 165.2 184 42.9
DCAR_028981 Daucus carota HOM05D004664 ORTHO05D005526 8.7e-34 149.4 126 56.3
Lsat_1_v5_gn_5_12680 Lactuca sativa HOM05D004664 ORTHO05D005526 3.8e-29 134.0 147 45.6
RcHm_v2.0_Chr6g0271881 Rosa chinensis HOM05D004664 ORTHO05D005526 1.3e-24 119.0 74 73.0
RcHm_v2.0_Chr6g0271991 Rosa chinensis HOM05D004664 ORTHO05D005526 2.8e-24 117.9 65 80.0
RcHm_v2.0_Chr6g0271891 Rosa chinensis HOM05D004664 ORTHO05D005526 6.2e-24 116.7 67 76.1
ECA237G0002 Erigeron canadensis HOM05D004664 ORTHO05D005526 1.0e-21 109.4 151 41.7
HPP92_017531 Vanilla planifolia HOM05D004664 ORTHO05D005526 1.9e-20 105.1 530 25.7
MCO08G225 Micromonas commoda HOM05D004664 ORTHO05D005526 1.0e-18 99.4 114 39.5
Duzib251G0924 Durio zibethinus HOM05D004664 ORTHO05D005526 9.7e-17 92.8 126 39.7
Duzib251G0925 Durio zibethinus HOM05D004664 ORTHO05D005526 9.7e-17 92.8 105 43.8
Lj1A1166G81 Lonicera japonica HOM05D004664 ORTHO05D005526 4.8e-16 90.5 339 27.1
Lj6C128G4 Lonicera japonica HOM05D004664 ORTHO05D005526 9.0e-15 86.3 118 41.5
Nn1g08309 Nelumbo nucifera HOM05D004664 ORTHO05D005526 1.2e-14 85.9 97 47.4
GSVIVG01004331001 Vitis vinifera HOM05D004664 ORTHO05D005526 1.3e-13 82.4 120 42.5
GSVIVG01004440001 Vitis vinifera HOM05D004664 ORTHO05D005526 2.2e-13 81.6 97 46.4
CiPaw.09G112900 Carya illinoinensis HOM05D004664 ORTHO05D005526 1.2e-11 75.9 113 47.8
GSVIVG01004113001 Vitis vinifera HOM05D004664 ORTHO05D005526 2.7e-11 74.7 80 50.0
ECA237G0001 Erigeron canadensis HOM05D004664 ORTHO05D005526 1.0e-10 72.8 81 50.6
RcHm_v2.0_Chr2g0108841 Rosa chinensis HOM05D004664 ORTHO05D005526 1.0e-10 72.8 69 59.4
Cc09_g09380 Coffea canephora HOM05D004664 ORTHO05D005526 4.3e-09 67.4 370 23.5
FAN18G1652 Fragaria x ananassa HOM05D004664 ORTHO05D005526 2.8e-08 64.7 103 48.5
Cre15.g636650 Chlamydomonas reinhardtii HOM05D004664 ORTHO05D005526 5.3e-07 60.5 124 33.1


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