Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L01677 Eucalyptus grandis HOM05D005579 ORTHO05D006775 0.0e+00 1270.0 633 100.0
PGR142G3926 Punica granatum HOM05D005579 ORTHO05D006775 1.7e-157 560.5 655 49.9
Cfa008319 Carpinus fangiana HOM05D005579 ORTHO05D006775 4.9e-157 558.9 673 48.3
Haze_13712 Corylus avellana HOM05D005579 ORTHO05D006775 1.6e-155 553.9 672 48.1
Atru.chr1.458 Acer truncatum HOM05D005579 ORTHO05D006775 1.3e-152 544.3 661 48.7
Prupe.2G294300 Prunus persica HOM05D005579 ORTHO05D006775 1.6e-152 543.9 667 48.6
QL09p014220 Quercus lobata HOM05D005579 ORTHO05D006775 6.5e-149 531.9 666 46.4
Ciclev10006492m.g Citrus clementina HOM05D005579 ORTHO05D006775 4.2e-148 529.3 651 48.1
FvH4_7g29470 Fragaria vesca HOM05D005579 ORTHO05D006775 5.5e-148 528.9 674 47.6
Dinv28443 Davidia involucrata HOM05D005579 ORTHO05D006775 7.4e-145 518.5 662 46.1
Rhsim03G0180800 Rhododendron simsii HOM05D005579 ORTHO05D006775 3.7e-144 516.2 672 46.9
GSVIVG01028977001 Vitis vinifera HOM05D005579 ORTHO05D006775 6.3e-144 515.4 673 46.7
CSS0017636 Camellia sinensis var. sinensis HOM05D005579 ORTHO05D006775 4.1e-143 512.7 639 46.8
CSS0047196 Camellia sinensis var. sinensis HOM05D005579 ORTHO05D006775 2.6e-142 510.0 638 46.9
FAN06G0670 Fragaria x ananassa HOM05D005579 ORTHO05D006775 5.9e-142 508.8 683 46.0
FAN01G1040 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.3e-141 507.7 676 46.0
CiPaw.04G071000 Carya illinoinensis HOM05D005579 ORTHO05D006775 2.2e-141 506.9 651 46.2
MD07G1268700 Malus domestica HOM05D005579 ORTHO05D006775 2.2e-141 506.9 682 44.0
FAN03G0333 Fragaria x ananassa HOM05D005579 ORTHO05D006775 5.0e-141 505.8 664 46.8
RcHm_v2.0_Chr1g0377251 Rosa chinensis HOM05D005579 ORTHO05D006775 1.1e-140 504.6 650 47.1
FAN03G0790 Fragaria x ananassa HOM05D005579 ORTHO05D006775 9.4e-140 501.5 684 45.9
COL.COLO4_14309 Corchorus olitorius HOM05D005579 ORTHO05D006775 3.6e-139 499.6 662 46.2
CANSAT21G2370 Cannabis sativa HOM05D005579 ORTHO05D006775 2.3e-138 496.9 672 46.4
Cpa.g.sc107.52 Carica papaya HOM05D005579 ORTHO05D006775 8.2e-136 488.4 637 48.4
Hma1.2p1_0270F.1_g108020 Hydrangea macrophylla HOM05D005579 ORTHO05D006775 1.1e-135 488.0 664 45.2
Duzib068G1336 Durio zibethinus HOM05D005579 ORTHO05D006775 1.5e-134 484.2 669 44.4
Potri.012G141100 Populus trichocarpa HOM05D005579 ORTHO05D006775 5.9e-134 482.3 672 45.5
FAN06G0715 Fragaria x ananassa HOM05D005579 ORTHO05D006775 2.9e-133 479.9 608 47.4
Sabra12G0106200 Salix brachista HOM05D005579 ORTHO05D006775 4.2e-132 476.1 676 45.7
Manes.06G147100 Manihot esculenta HOM05D005579 ORTHO05D006775 1.6e-131 474.2 647 43.7
Gohir.D12G259200 Gossypium hirsutum HOM05D005579 ORTHO05D006775 1.4e-127 461.1 658 44.2
DCAR_018198 Daucus carota HOM05D005579 ORTHO05D006775 2.2e-125 453.8 673 44.1
TAR367G0001 Trochodendron aralioides HOM05D005579 ORTHO05D006775 3.6e-123 446.4 663 43.1
Lj2g0003134 Lotus japonicus HOM05D005579 ORTHO05D006775 8.0e-123 445.3 666 42.0
Migut.F00340 Erythranthe guttata HOM05D005579 ORTHO05D006775 3.3e-121 439.9 657 43.7
Gorai.008G277600 Gossypium raimondii HOM05D005579 ORTHO05D006775 7.5e-121 438.7 639 43.8
Actinidia32860 Actinidia chinensis HOM05D005579 ORTHO05D006775 6.3e-120 435.6 595 45.7
Sed0022815 Sechium edule HOM05D005579 ORTHO05D006775 1.4e-119 434.5 662 42.6
Gohir.A12G257850 Gossypium hirsutum HOM05D005579 ORTHO05D006775 1.2e-118 431.4 643 43.1
ECA232G1470 Erigeron canadensis HOM05D005579 ORTHO05D006775 3.5e-118 429.9 651 44.4
ClCG09G012930 Citrullus lanatus HOM05D005579 ORTHO05D006775 8.5e-117 425.2 665 41.2
Peaxi162Scf00444g00841 Petunia axillaris HOM05D005579 ORTHO05D006775 4.2e-116 422.9 658 41.0
Cc02_g02990 Coffea canephora HOM05D005579 ORTHO05D006775 1.8e-114 417.5 665 41.1
Nn6g33500 Nelumbo nucifera HOM05D005579 ORTHO05D006775 2.3e-114 417.2 655 41.1
Thhalv10015364m.g Eutrema salsugineum HOM05D005579 ORTHO05D006775 2.6e-113 413.7 677 40.6
Nitab4.5_0000716g0010 Nicotiana tabacum HOM05D005579 ORTHO05D006775 2.6e-113 413.7 661 41.0
CsaV3_3G049940 Cucumis sativus L. HOM05D005579 ORTHO05D006775 3.7e-112 409.8 663 41.3
MELO3C003322.2 Cucumis melo HOM05D005579 ORTHO05D006775 2.4e-111 407.1 660 40.8
Nitab4.5_0009681g0030 Nicotiana tabacum HOM05D005579 ORTHO05D006775 7.0e-111 405.6 667 40.2
HanXRQChr15g0495541 Helianthus annuus HOM05D005579 ORTHO05D006775 1.6e-110 404.4 644 42.4
AL8G26680 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 3.5e-110 403.3 683 40.1
EL10Ac3g05643 Beta vulgaris HOM05D005579 ORTHO05D006775 7.7e-110 402.1 675 41.8
SalBow4G1821 Salvia bowleyana HOM05D005579 ORTHO05D006775 1.7e-109 401.0 696 40.5
SalBow4G2278 Salvia bowleyana HOM05D005579 ORTHO05D006775 1.7e-109 401.0 696 40.5
Sp6g14550 Schrenkiella parvula HOM05D005579 ORTHO05D006775 1.7e-109 401.0 670 39.9
Solyc03g025820.3 Solanum lycopersicum HOM05D005579 ORTHO05D006775 5.0e-109 399.4 662 40.9
MBI17_g39341_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 6.5e-109 399.1 672 38.5
Thecc.03G176600 Theobroma cacao HOM05D005579 ORTHO05D006775 6.5e-109 399.1 579 44.4
PGSC0003DMG400014341 Solanum tuberosum HOM05D005579 ORTHO05D006775 8.5e-109 398.7 663 38.9
Sc13g0008650 Simmondsia chinensis HOM05D005579 ORTHO05D006775 1.1e-108 398.3 678 40.9
AT5G52290 Arabidopsis thaliana HOM05D005579 ORTHO05D006775 1.9e-108 397.5 681 40.1
Lsat_1_v5_gn_9_55980 Lactuca sativa HOM05D005579 ORTHO05D006775 1.9e-108 397.5 637 42.1
AL271U10020 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 7.2e-108 395.6 675 39.7
Phvul.004G117000 Phaseolus vulgaris HOM05D005579 ORTHO05D006775 3.6e-107 393.3 675 38.8
SGA_v2.0_scaffold60G21038 Striga asiatica HOM05D005579 ORTHO05D006775 3.6e-107 393.3 660 40.2
Sopen03g004630 Solanum pennellii HOM05D005579 ORTHO05D006775 4.7e-107 392.9 660 39.8
TPR.G10740 Trifolium pratense HOM05D005579 ORTHO05D006775 4.7e-107 392.9 667 40.2
VMungo0464G1636 Vigna mungo HOM05D005579 ORTHO05D006775 4.7e-107 392.9 657 40.0
CARHR265270 Cardamine hirsuta HOM05D005579 ORTHO05D006775 2.6e-105 387.1 682 39.6
CAN.G490.30 Capsicum annuum HOM05D005579 ORTHO05D006775 8.3e-104 382.1 667 38.8
Glyma.09G139400 Glycine max HOM05D005579 ORTHO05D006775 1.4e-103 381.3 642 38.9
Carub.0008s1239 Capsella rubella HOM05D005579 ORTHO05D006775 1.8e-103 380.9 673 39.4
PSO063G6446 Papaver somniferum HOM05D005579 ORTHO05D006775 2.4e-103 380.6 657 39.3
Aa31LG3G8710 Aethionema arabicum HOM05D005579 ORTHO05D006775 4.1e-103 379.8 675 38.7
Ah.07g207210 Amaranthus hybridus HOM05D005579 ORTHO05D006775 5.4e-103 379.4 675 40.1
Lalb_Chr19g0130861 Lupinus albus HOM05D005579 ORTHO05D006775 2.7e-102 377.1 665 39.4
BcaB01g04199 Brassica carinata HOM05D005579 ORTHO05D006775 3.5e-102 376.7 668 39.4
arahy.Tifrunner.gnm1.ann1.TEHT7Q Arachis hypogaea HOM05D005579 ORTHO05D006775 1.3e-101 374.8 639 40.8
PSO782G1268 Papaver somniferum HOM05D005579 ORTHO05D006775 1.3e-101 374.8 633 39.7
TWI23G0169 Tripterygium wilfordii HOM05D005579 ORTHO05D006775 2.3e-101 374.0 551 44.6
THA.LOC104800252 Tarenaya hassleriana HOM05D005579 ORTHO05D006775 6.6e-101 372.5 686 37.8
AUR62021193 Chenopodium quinoa HOM05D005579 ORTHO05D006775 7.3e-100 369.0 681 37.9
arahy.Tifrunner.gnm1.ann1.Q0IWYL Arachis hypogaea HOM05D005579 ORTHO05D006775 1.4e-98 364.8 631 40.1
BcaC01g06176 Brassica carinata HOM05D005579 ORTHO05D006775 3.0e-98 363.6 666 38.4
A03p15740 Brassica napus HOM05D005579 ORTHO05D006775 3.0e-98 363.6 666 37.8
BraA03t10864Z Brassica rapa HOM05D005579 ORTHO05D006775 3.0e-98 363.6 666 37.8
Medtr6g045357 Medicago truncatula HOM05D005579 ORTHO05D006775 2.6e-97 360.5 633 39.0
Psat0s2227g0080 Pisum sativum HOM05D005579 ORTHO05D006775 3.4e-97 360.1 677 37.7
C03p18410 Brassica napus HOM05D005579 ORTHO05D006775 2.2e-96 357.5 664 38.0
BolC3t14238H Brassica oleracea HOM05D005579 ORTHO05D006775 2.2e-96 357.5 664 38.0
MD01G1200800 Malus domestica HOM05D005579 ORTHO05D006775 7.0e-95 352.4 621 38.3
AUR62015985 Chenopodium quinoa HOM05D005579 ORTHO05D006775 8.6e-93 345.5 644 38.2
ATR0680G156 Amborella trichopoda HOM05D005579 ORTHO05D006775 1.7e-88 331.3 743 34.7
FAN10G2011 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.9e-84 317.8 261 65.5
FAN10G0535 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.0e-77 295.4 497 40.4
SHI39775 Sapria himalayana HOM05D005579 ORTHO05D006775 5.2e-74 283.1 655 33.6
Os02g0642600 Oryza sativa ssp. japonica HOM05D005579 ORTHO05D006775 8.4e-72 275.8 665 34.1
unitig_37.g12526 Utricularia gibba HOM05D005579 ORTHO05D006775 4.0e-66 256.9 588 35.7
Zm00001eb248620 Zea mays HOM05D005579 ORTHO05D006775 1.5e-65 255.0 687 31.7
CDE08G0179 Ceratophyllum demersum HOM05D005579 ORTHO05D006775 9.3e-55 219.2 582 32.3
Hund11748 Selenicereus undatus HOM05D005579 ORTHO05D006775 5.6e-52 209.9 509 34.2
HPP92_008526 Vanilla planifolia HOM05D005579 ORTHO05D006775 1.3e-51 208.8 186 60.2
MBI17_g46332_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 1.8e-50 204.9 284 42.6
Actinidia34112 Actinidia chinensis HOM05D005579 ORTHO05D006775 3.8e-40 170.6 147 61.2
SMO364G0179 Selaginella moellendorffii HOM05D005579 ORTHO05D006775 7.9e-38 162.9 222 39.6
Mapoly0013s0198 Marchantia polymorpha HOM05D005579 ORTHO05D006775 1.2e-33 149.1 219 40.2
Pp3c13_14750 Physcomitrium patens HOM05D005579 ORTHO05D006775 6.1e-30 136.7 216 38.9
MBI17_g46331_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 5.3e-26 123.6 293 31.4
Pp3c21_13440 Physcomitrium patens HOM05D005579 ORTHO05D006775 9.4e-23 112.8 347 28.0
Oeu056255.1 Olea europaea HOM05D005579 ORTHO05D006775 1.4e-21 109.0 88 61.4
CDE08G1090 Ceratophyllum demersum HOM05D005579 ORTHO05D006775 2.0e-20 105.1 88 55.7
CBR_g61457 Chara braunii HOM05D005579 ORTHO05D006775 2.5e-07 61.6 145 30.3
TPR.G31959 Trifolium pratense HOM05D061576 ORTHO05D006775 1.6e-06 58.9 122 32.8
TPR.G17624 Trifolium pratense HOM05D005579 ORTHO05D006775 4.7e-06 57.4 132 31.1


User provided reference genes

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