Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L00150 Eucalyptus grandis HOM05D006551 ORTHO05D008546 4.9e-122 441.0 206 100.0
Dinv15335 Davidia involucrata HOM05D006551 ORTHO05D008546 1.5e-94 349.7 204 77.5
Manes.09G083300 Manihot esculenta HOM05D006551 ORTHO05D008546 4.3e-94 348.2 206 77.2
Sc17g0008010 Simmondsia chinensis HOM05D006551 ORTHO05D008546 3.7e-93 345.1 202 77.7
CSS0008489 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 8.1e-93 344.0 202 77.2
RcHm_v2.0_Chr5g0000451 Rosa chinensis HOM05D006551 ORTHO05D008546 1.4e-92 343.2 205 75.6
CSS0047745 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 1.8e-92 342.8 202 77.2
Prupe.4G003400 Prunus persica HOM05D006551 ORTHO05D008546 1.8e-92 342.8 204 77.0
Ciclev10016440m.g Citrus clementina HOM05D006551 ORTHO05D008546 4.0e-92 341.7 205 74.1
Thecc.06G241400 Theobroma cacao HOM05D006551 ORTHO05D008546 9.0e-92 340.5 204 75.0
TAR629G1611 Trochodendron aralioides HOM05D006551 ORTHO05D008546 1.2e-91 340.1 204 75.5
THA.LOC104815473 Tarenaya hassleriana HOM05D006551 ORTHO05D008546 3.4e-91 338.6 203 75.9
Sopen04g007100 Solanum pennellii HOM05D006551 ORTHO05D008546 7.6e-91 337.4 204 73.0
FvH4_3g00300 Fragaria vesca HOM05D006551 ORTHO05D008546 1.3e-90 336.7 204 75.5
TWI38G1730 Tripterygium wilfordii HOM05D006551 ORTHO05D008546 1.3e-90 336.7 203 76.8
PGSC0003DMG400015008 Solanum tuberosum HOM05D006551 ORTHO05D008546 1.7e-90 336.3 204 72.5
Duzib160G0007 Durio zibethinus HOM05D006551 ORTHO05D008546 2.2e-90 335.9 204 73.5
Aa31LG2G12400 Aethionema arabicum HOM05D006551 ORTHO05D008546 2.9e-90 335.5 202 75.7
Lj6g0027493 Lotus japonicus HOM05D006551 ORTHO05D008546 4.9e-90 334.7 201 77.6
Potri.006G004500 Populus trichocarpa HOM05D006551 ORTHO05D008546 6.4e-90 334.3 202 74.3
QL05p067740 Quercus lobata HOM05D006551 ORTHO05D008546 6.4e-90 334.3 203 74.9
Cfa000032 Carpinus fangiana HOM05D006551 ORTHO05D008546 8.4e-90 334.0 205 75.1
Phvul.006G137400 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 1.9e-89 332.8 201 76.6
Medtr2g027110 Medicago truncatula HOM05D006551 ORTHO05D008546 3.2e-89 332.0 207 73.9
CAN.G1263.6 Capsicum annuum HOM05D006551 ORTHO05D008546 5.5e-89 331.3 204 71.1
Glyma.09G014800 Glycine max HOM05D006551 ORTHO05D008546 7.1e-89 330.9 202 76.2
Lalb_Chr20g0119561 Lupinus albus HOM05D006551 ORTHO05D008546 9.3e-89 330.5 202 75.2
MD10G1339500 Malus domestica HOM05D006551 ORTHO05D008546 9.3e-89 330.5 205 74.1
Phvul.006G137611 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 9.3e-89 330.5 201 76.1
Migut.M01446 Erythranthe guttata HOM05D006551 ORTHO05D008546 1.6e-88 329.7 208 72.1
TPR.G17557 Trifolium pratense HOM05D006551 ORTHO05D008546 2.7e-88 328.9 202 76.2
CiPaw.10G082200 Carya illinoinensis HOM05D006551 ORTHO05D008546 3.5e-88 328.6 205 73.2
Ca_00765_v3 Cicer arietinum L. HOM05D006551 ORTHO05D008546 7.9e-88 327.4 201 75.6
BraA09t41161Z Brassica rapa HOM05D006551 ORTHO05D008546 1.0e-87 327.0 204 74.5
Sabra06G0003800 Salix brachista HOM05D006551 ORTHO05D008546 1.0e-87 327.0 202 73.3
A09p57680 Brassica napus HOM05D006551 ORTHO05D008546 1.3e-87 326.6 205 73.7
VMungo0540G0952 Vigna mungo HOM05D006551 ORTHO05D008546 5.1e-87 324.7 202 75.2
AL4G11740 Arabidopsis lyrata HOM05D006551 ORTHO05D008546 4.3e-86 321.6 202 73.3
arahy.Tifrunner.gnm1.ann1.TFI8LM Arachis hypogaea HOM05D006551 ORTHO05D008546 7.4e-86 320.9 201 73.1
AT2G22260 Arabidopsis thaliana HOM05D006551 ORTHO05D008546 1.3e-85 320.1 203 71.9
SalBow8G1397 Salvia bowleyana HOM05D006551 ORTHO05D008546 1.6e-85 319.7 221 68.3
SalBow8G2449 Salvia bowleyana HOM05D006551 ORTHO05D008546 1.6e-85 319.7 221 68.3
Carub.0004s0140 Capsella rubella HOM05D006551 ORTHO05D008546 2.1e-85 319.3 203 72.4
Aqoxy1G04265 Aquilegia oxysepala HOM05D006551 ORTHO05D008546 3.7e-85 318.5 207 69.6
arahy.Tifrunner.gnm1.ann1.HFV92P Arachis hypogaea HOM05D006551 ORTHO05D008546 4.8e-85 318.2 201 72.6
Gorai.011G008500 Gossypium raimondii HOM05D006551 ORTHO05D008546 4.8e-85 318.2 204 70.6
MSTRG.7126 Avicennia marina HOM05D006551 ORTHO05D008546 8.2e-85 317.4 207 70.0
BcaC07g41084 Brassica carinata HOM05D006551 ORTHO05D008546 8.2e-85 317.4 205 71.7
BcaC07g41085 Brassica carinata HOM05D006551 ORTHO05D008546 8.2e-85 317.4 205 71.7
C08p40880 Brassica napus HOM05D006551 ORTHO05D008546 8.2e-85 317.4 205 71.7
BolC8t51654H Brassica oleracea HOM05D006551 ORTHO05D008546 8.2e-85 317.4 205 71.7
COL.COLO4_31943 Corchorus olitorius HOM05D000879 ORTHO05D002864 8.2e-85 317.4 204 71.6
Gohir.D10G007800 Gossypium hirsutum HOM05D006551 ORTHO05D008546 8.2e-85 317.4 204 70.1
Atru.chr1.1073 Acer truncatum HOM05D006551 ORTHO05D008546 1.4e-84 316.6 204 71.6
Gohir.A10G007900 Gossypium hirsutum HOM05D006551 ORTHO05D008546 2.4e-84 315.8 204 70.1
Ah.14g087400 Amaranthus hybridus HOM05D006551 ORTHO05D008546 4.0e-84 315.1 216 66.2
Nitab4.5_0000147g0330 Nicotiana tabacum HOM05D006551 ORTHO05D008546 5.3e-84 314.7 192 71.9
Hund08692 Selenicereus undatus HOM05D006551 ORTHO05D008546 1.5e-83 313.2 205 69.8
EL10Ac8g20269 Beta vulgaris HOM05D006551 ORTHO05D008546 3.4e-83 312.0 211 68.7
SGA_v2.0_scaffold7G03692 Striga asiatica HOM05D006551 ORTHO05D008546 7.6e-83 310.8 193 73.1
Cc09_g00290 Coffea canephora HOM05D006551 ORTHO05D008546 2.2e-82 309.3 203 70.9
Peaxi162Scf00811g00222 Petunia axillaris HOM05D006551 ORTHO05D008546 4.9e-82 308.1 192 70.8
DCAR_002245 Daucus carota HOM05D006551 ORTHO05D008546 8.4e-82 307.4 204 67.6
Eucgr.E03850 Eucalyptus grandis HOM05D006551 ORTHO05D008546 8.4e-82 307.4 206 67.0
MELO3C008006.2 Cucumis melo HOM05D006551 ORTHO05D008546 1.4e-81 306.6 202 69.8
Lj1C1247T0 Lonicera japonica HOM05D006551 ORTHO05D008546 1.4e-81 306.6 202 70.3
HPP92_018202 Vanilla planifolia HOM05D006551 ORTHO05D008546 1.4e-81 306.6 204 71.1
ECA248G0604 Erigeron canadensis HOM05D006551 ORTHO05D008546 2.5e-81 305.8 205 67.3
PGR042G3561 Punica granatum HOM05D006551 ORTHO05D008546 9.3e-81 303.9 207 68.1
Lsat_1_v5_gn_7_12961 Lactuca sativa HOM05D006551 ORTHO05D008546 2.1e-80 302.8 204 66.7
ClCG01G021210 Citrullus lanatus HOM05D006551 ORTHO05D008546 1.0e-79 300.4 204 68.1
CARHR113490 Cardamine hirsuta HOM05D006551 ORTHO05D008546 1.3e-79 300.1 202 69.3
Hma1.2p1_1175F.1_g264070 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 1.8e-79 299.7 202 69.3
PSO210G1263 Papaver somniferum HOM05D006551 ORTHO05D008546 2.3e-79 299.3 208 67.3
Nitab4.5_0006294g0080 Nicotiana tabacum HOM05D006551 ORTHO05D008546 3.0e-79 298.9 192 70.3
PSO210G0886 Papaver somniferum HOM05D006551 ORTHO05D008546 5.1e-79 298.1 206 66.5
Zm00001eb380830 Zea mays HOM05D006551 ORTHO05D008546 1.5e-78 296.6 204 66.2
HanXRQChr05g0129031 Helianthus annuus HOM05D006551 ORTHO05D008546 3.3e-78 295.4 203 68.5
CsaV3_6G048230 Cucumis sativus L. HOM05D006551 ORTHO05D008546 5.7e-78 294.7 202 66.8
unitig_37.g12177 Utricularia gibba HOM05D006551 ORTHO05D008546 6.3e-77 291.2 229 60.3
Cpa.g.sc27.224 Carica papaya HOM05D006551 ORTHO05D008546 2.4e-76 289.3 203 66.0
AUR62021809 Chenopodium quinoa HOM05D006551 ORTHO05D008546 9.0e-76 287.3 203 63.1
Sed0011139 Sechium edule HOM05D006551 ORTHO05D008546 2.0e-75 286.2 202 65.3
Psat1g172360 Pisum sativum HOM05D006551 ORTHO05D008546 1.4e-73 280.0 168 78.6
Oeu025969.1 Olea europaea HOM05D006551 ORTHO05D008546 4.6e-72 275.0 169 72.2
vmacro03605 Vaccinium macrocarpon HOM05D006551 ORTHO05D008546 6.1e-72 274.6 170 74.7
BcaB08g35054 Brassica carinata HOM05D006551 ORTHO05D008546 4.1e-68 261.9 176 70.5
SpUn1059_0010 Schrenkiella parvula HOM05D006551 ORTHO05D008546 6.9e-68 261.2 168 72.0
PGR004G0828 Punica granatum HOM05D006551 ORTHO05D008546 1.9e-65 253.1 138 81.2
Solyc04g015080.4 Solanum lycopersicum HOM05D006551 ORTHO05D008546 2.7e-64 249.2 139 77.0
Nn1g07524 Nelumbo nucifera HOM05D006551 ORTHO05D008546 5.7e-62 241.5 141 77.3
Haze_07021 Corylus avellana HOM05D006551 ORTHO05D008546 3.7e-61 238.8 202 60.9
ATR0751G145 Amborella trichopoda HOM05D006551 ORTHO05D008546 6.3e-61 238.0 166 68.7
Hma1.2p1_1175F.1_g264060 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 8.2e-61 237.7 133 79.7
AUR62012856 Chenopodium quinoa HOM05D006551 ORTHO05D008546 3.1e-60 235.7 169 63.9
Rhsim13G0140300 Rhododendron simsii HOM05D006551 ORTHO05D008546 2.1e-56 223.0 139 73.4
AagrBONN_evm.TU.Sc2ySwM_362.1805 Anthoceros agrestis HOM05D006551 ORTHO05D008546 4.7e-56 221.9 278 41.7
Eucgr.E03848 Eucalyptus grandis HOM05D006551 ORTHO05D008546 1.8e-55 219.9 138 67.4
SEGI_23146 Sequoiadendron giganteum HOM05D006551 ORTHO05D008546 1.2e-48 197.2 225 46.2
Peaxi162Scf00827g00057 Petunia axillaris HOM05D006551 ORTHO05D008546 5.2e-47 191.8 163 59.5
AagrBONN_evm.TU.Sc2ySwM_369.541 Anthoceros agrestis HOM05D006551 ORTHO05D008546 3.3e-46 189.1 233 42.9
SHI31451 Sapria himalayana HOM05D006551 ORTHO05D008546 2.3e-39 166.4 114 69.3
CBR_g3891 Chara braunii HOM05D006551 ORTHO05D008546 2.0e-35 153.3 130 52.3
Glyma.15G120500 Glycine max HOM05D006551 ORTHO05D008546 5.5e-33 145.2 109 70.6
Sed0010073 Sechium edule HOM05D006551 ORTHO05D008546 2.6e-30 136.3 182 39.0
Psat2g019160 Pisum sativum HOM05D006551 ORTHO05D008546 1.8e-28 130.2 74 71.6
SHI31456 Sapria himalayana HOM05D006551 ORTHO05D008546 1.9e-25 120.2 75 66.7
Hma1.2p1_1322F.1_g275500 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 2.4e-20 103.2 67 71.6
VMungo0540G1474 Vigna mungo HOM05D006551 ORTHO05D008546 2.7e-19 99.8 60 81.7
Cfa024106 Carpinus fangiana HOM05D006551 ORTHO05D008546 1.1e-15 87.8 119 40.3
Pp3c2_11520 Physcomitrium patens HOM05D006551 ORTHO05D008546 6.8e-15 85.1 139 36.0
Solyc12g056880.2 Solanum lycopersicum HOM05D006551 ORTHO05D008546 1.9e-12 77.0 96 46.9
PRCOL_00003886 Prasinoderma coloniale HOM05D006551 ORTHO05D044110 5.4e-12 75.5 185 29.7
PRCOL_00002494 Prasinoderma coloniale HOM05D006551 ORTHO05D008546 1.7e-10 70.5 118 38.1
PRCOL_00000148 Prasinoderma coloniale HOM05D006551 ORTHO05D008546 3.9e-10 69.3 190 27.4
Sp4g01310 Schrenkiella parvula HOM05D006551 ORTHO05D008546 8.6e-10 68.2 35 77.1
Os06g0286310 Oryza sativa ssp. japonica HOM05D006551 ORTHO05D008546 4.7e-08 62.4 37 64.9
VMungo0540G1416 Vigna mungo HOM05D000555 ORTHO05D001906 3.4e-06 56.2 35 62.9
Cfa024972 Carpinus fangiana HOM05D006551 ORTHO05D043702 5.8e-06 55.5 124 33.1
HanXRQChr17g0567191 Helianthus annuus HOM05D000289 ORTHO05D000208 5.8e-06 55.5 100 36.0


User provided reference genes

Program Settings