Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K03393 Eucalyptus grandis HOM05D006016 ORTHO05D007553 7.9e-164 580.5 314 100.0
Eucgr.K03395 Eucalyptus grandis HOM05D006016 ORTHO05D007553 1.1e-136 490.3 273 95.2
Cfa006104 Carpinus fangiana HOM05D006016 ORTHO05D007553 5.7e-122 441.4 302 82.8
Haze_04746 Corylus avellana HOM05D006016 ORTHO05D007553 1.8e-120 436.4 302 81.8
PGR044G1280 Punica granatum HOM05D006016 ORTHO05D007553 1.8e-120 436.4 315 79.0
ClCG07G000070 Citrullus lanatus HOM05D006016 ORTHO05D007553 3.5e-119 432.2 323 78.0
GSVIVG01011095001 Vitis vinifera HOM05D006016 ORTHO05D007553 1.0e-118 430.6 322 78.0
Sed0013000 Sechium edule HOM05D006016 ORTHO05D007553 2.9e-118 429.1 321 77.9
CiPaw.07G094500 Carya illinoinensis HOM05D006016 ORTHO05D007553 3.8e-118 428.7 302 81.5
Prupe.8G244900 Prunus persica HOM05D006016 ORTHO05D007553 6.1e-116 421.4 315 74.6
QL12p022630 Quercus lobata HOM05D006016 ORTHO05D007553 6.1e-116 421.4 326 73.9
Duzib138G0992 Durio zibethinus HOM05D006016 ORTHO05D007553 1.0e-115 420.6 307 75.9
CANSAT80G0718 Cannabis sativa HOM05D006016 ORTHO05D007553 1.4e-115 420.2 304 75.7
Thecc.01G283800 Theobroma cacao HOM05D006016 ORTHO05D007553 1.4e-115 420.2 315 76.5
SGA_v2.0_scaffold1G00448 Striga asiatica HOM05D006016 ORTHO05D007553 3.4e-114 415.6 272 82.0
MD03G1268900 Malus domestica HOM05D006016 ORTHO05D007553 4.4e-114 415.2 315 74.6
Gorai.004G083400 Gossypium raimondii HOM05D006016 ORTHO05D007553 5.7e-114 414.8 320 73.8
Gohir.A08G069800 Gossypium hirsutum HOM05D006016 ORTHO05D007553 7.5e-114 414.5 315 74.0
Nn1g02145 Nelumbo nucifera HOM05D006016 ORTHO05D007553 2.2e-113 412.9 317 73.5
MD11G1289700 Malus domestica HOM05D006016 ORTHO05D007553 3.7e-113 412.1 315 73.7
Manes.01G210000 Manihot esculenta HOM05D006016 ORTHO05D007553 3.7e-113 412.1 315 72.7
MELO3C014346.2 Cucumis melo HOM05D006016 ORTHO05D007553 1.8e-112 409.8 305 76.4
Potri.014G138500 Populus trichocarpa HOM05D006016 ORTHO05D007553 1.8e-112 409.8 318 68.6
RcHm_v2.0_Chr1g0321311 Rosa chinensis HOM05D006016 ORTHO05D007553 2.4e-112 409.5 315 72.4
Oeu011169.1 Olea europaea HOM05D006016 ORTHO05D007553 5.4e-112 408.3 320 69.4
COL.COLO4_09142 Corchorus olitorius HOM05D006016 ORTHO05D007553 1.6e-111 406.8 308 73.7
Ciclev10020923m.g Citrus clementina HOM05D006016 ORTHO05D007553 3.5e-111 405.6 315 74.0
Aqoxy2G03243 Aquilegia oxysepala HOM05D006016 ORTHO05D007553 5.9e-111 404.8 317 70.3
CSS0041846 Camellia sinensis var. sinensis HOM05D006016 ORTHO05D007553 1.0e-110 404.1 314 74.2
Glyma.10G024400 Glycine max HOM05D006016 ORTHO05D007553 1.3e-110 403.7 306 69.9
Nitab4.5_0007392g0030 Nicotiana tabacum HOM05D006016 ORTHO05D007553 2.9e-110 402.5 303 71.3
Ca_09774_v3 Cicer arietinum L. HOM05D006016 ORTHO05D007553 3.8e-110 402.1 305 73.4
Hma1.2p1_0628F.1_g191900 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 5.0e-110 401.7 257 83.3
Sc05g0005010 Simmondsia chinensis HOM05D006016 ORTHO05D007553 5.0e-110 401.7 313 72.2
Nitab4.5_0006180g0080 Nicotiana tabacum HOM05D006016 ORTHO05D007553 1.9e-109 399.8 303 71.9
MSTRG.18215 Avicennia marina HOM05D006016 ORTHO05D007553 1.6e-108 396.7 315 72.7
Cpa.g.sc485.5 Carica papaya HOM05D006016 ORTHO05D007553 1.6e-108 396.7 249 85.9
FvH4_7g02610 Fragaria vesca HOM05D006016 ORTHO05D007553 2.7e-108 396.0 298 73.2
Medtr1g072640 Medicago truncatula HOM05D006016 ORTHO05D007553 6.1e-108 394.8 305 72.8
arahy.Tifrunner.gnm1.ann1.NXI6YJ Arachis hypogaea HOM05D006016 ORTHO05D007553 8.0e-108 394.4 268 76.1
PSO170G1401 Papaver somniferum HOM05D006016 ORTHO05D007553 8.0e-108 394.4 276 73.9
PSO407G0301 Papaver somniferum HOM05D006016 ORTHO05D007553 8.0e-108 394.4 276 73.9
TPR.G1544 Trifolium pratense HOM05D000563 ORTHO05D000536 8.0e-108 394.4 300 73.0
Atru.chr5.1361 Acer truncatum HOM05D006016 ORTHO05D007553 1.0e-107 394.0 317 71.0
DCAR_002754 Daucus carota HOM05D006016 ORTHO05D007553 1.0e-107 394.0 318 69.8
Hund06953 Selenicereus undatus HOM05D006016 ORTHO05D007553 1.0e-107 394.0 313 71.6
PGSC0003DMG400000944 Solanum tuberosum HOM05D006016 ORTHO05D007553 1.0e-107 394.0 319 73.0
arahy.Tifrunner.gnm1.ann1.Q6PPUG Arachis hypogaea HOM05D006016 ORTHO05D007553 1.8e-107 393.3 297 69.0
Solyc09g064790.3 Solanum lycopersicum HOM05D006016 ORTHO05D007553 1.8e-107 393.3 317 71.6
Sopen09g026490 Solanum pennellii HOM05D006016 ORTHO05D007553 1.8e-107 393.3 302 73.5
AUR62004906 Chenopodium quinoa HOM05D006016 ORTHO05D007553 4.0e-107 392.1 271 74.9
TAR633G0970 Trochodendron aralioides HOM05D006016 ORTHO05D007553 1.5e-106 390.2 249 85.5
FAN03G2867 Fragaria x ananassa HOM05D006016 ORTHO05D007553 2.0e-106 389.8 326 68.1
Lalb_Chr21g0306561 Lupinus albus HOM05D006016 ORTHO05D007553 2.6e-106 389.4 279 75.6
EL10Ac4g09090 Beta vulgaris HOM05D006016 ORTHO05D007553 3.4e-106 389.0 263 75.7
CAN.G962.6 Capsicum annuum HOM05D006016 ORTHO05D007553 3.4e-106 389.0 271 76.8
CARHR124900 Cardamine hirsuta HOM05D006016 ORTHO05D007553 4.4e-106 388.7 274 75.9
Carub.0004s3083 Capsella rubella HOM05D006016 ORTHO05D007553 5.7e-106 388.3 276 73.9
ATR0626G088 Amborella trichopoda HOM05D006016 ORTHO05D007553 3.7e-105 385.6 318 68.2
Peaxi162Scf00104g00220 Petunia axillaris HOM05D006016 ORTHO05D007553 8.3e-105 384.4 275 73.8
Thhalv10001558m.g Eutrema salsugineum HOM05D006016 ORTHO05D007553 5.4e-104 381.7 313 68.7
CsaV3_6G036870 Cucumis sativus L. HOM05D006016 ORTHO05D007553 7.0e-104 381.3 319 70.2
CDE01G0302 Ceratophyllum demersum HOM05D006016 ORTHO05D007553 3.5e-103 379.0 257 78.6
Migut.D00263 Erythranthe guttata HOM05D006016 ORTHO05D007553 7.7e-103 377.9 269 72.9
FAN01G1545 Fragaria x ananassa HOM05D006016 ORTHO05D007553 7.7e-103 377.9 315 68.3
BcaB02g08738 Brassica carinata HOM05D006016 ORTHO05D007553 1.0e-102 377.5 286 71.0
BraA05t18997Z Brassica rapa HOM05D006016 ORTHO05D007553 1.3e-102 377.1 314 68.2
AUR62032753 Chenopodium quinoa HOM05D006016 ORTHO05D007553 3.8e-102 375.6 247 77.7
Cc02_g34480 Coffea canephora HOM05D006016 ORTHO05D007553 1.9e-101 373.2 266 75.2
THA.LOC104823056 Tarenaya hassleriana HOM05D006016 ORTHO05D007553 5.6e-101 371.7 319 67.7
Sp4g30040 Schrenkiella parvula HOM05D006016 ORTHO05D007553 9.5e-101 370.9 315 66.0
Aa31LG4G3290 Aethionema arabicum HOM05D006016 ORTHO05D007553 1.2e-100 370.5 288 69.8
AL4G47720 Arabidopsis lyrata HOM05D006016 ORTHO05D007553 6.1e-100 368.2 326 64.7
SalBow4G2498 Salvia bowleyana HOM05D006016 ORTHO05D007553 6.1e-100 368.2 306 66.0
TWI14G0073 Tripterygium wilfordii HOM05D006016 ORTHO05D007553 5.2e-99 365.2 317 67.5
arahy.Tifrunner.gnm1.ann1.95RMVD Arachis hypogaea HOM05D006016 ORTHO05D007553 8.9e-99 364.4 257 73.2
HPP92_025128 Vanilla planifolia HOM05D006016 ORTHO05D007553 4.4e-98 362.1 258 74.4
Phvul.007G169400 Phaseolus vulgaris HOM05D006016 ORTHO05D007553 5.7e-98 361.7 302 68.5
BolC4t21679H Brassica oleracea HOM05D006016 ORTHO05D007553 7.5e-98 361.3 333 64.0
A05p00010 Brassica napus HOM05D006016 ORTHO05D007553 2.2e-97 359.8 305 67.5
BolSC55t61226H Brassica oleracea HOM05D006016 ORTHO05D007553 2.2e-97 359.8 333 63.7
Rhsim01G0276200 Rhododendron simsii HOM05D006016 ORTHO05D007553 2.2e-97 359.8 374 56.7
HanXRQChr01g0002401 Helianthus annuus HOM05D006016 ORTHO05D007553 1.4e-96 357.1 265 69.4
unitig_61.g26325 Utricularia gibba HOM05D006016 ORTHO05D007553 2.3e-94 349.7 316 63.6
Lsat_1_v5_gn_5_187441 Lactuca sativa HOM05D006016 ORTHO05D007553 1.1e-93 347.4 273 68.1
Lj5g0023557 Lotus japonicus HOM05D006016 ORTHO05D007553 1.5e-93 347.1 277 70.4
Os05g0393400 Oryza sativa ssp. japonica HOM05D006016 ORTHO05D007553 7.3e-93 344.7 321 58.6
Sabra14G0104500 Salix brachista HOM05D006016 ORTHO05D007553 1.2e-92 344.0 317 60.6
Lj2C1178T3 Lonicera japonica HOM05D006016 ORTHO05D007553 1.6e-92 343.6 225 79.1
BcaC02g12797 Brassica carinata HOM05D006016 ORTHO05D007553 4.7e-92 342.0 314 64.6
ECA248G0902 Erigeron canadensis HOM05D006016 ORTHO05D007553 1.4e-91 340.5 276 66.7
Psat6g138080 Pisum sativum HOM05D006016 ORTHO05D007553 3.4e-90 335.9 228 76.3
Gohir.D08G079100 Gossypium hirsutum HOM05D006016 ORTHO05D007553 1.7e-89 333.6 315 63.8
Zm00001eb287380 Zea mays HOM05D006016 ORTHO05D007553 2.9e-89 332.8 249 69.1
BolSC55t61222H Brassica oleracea HOM05D006016 ORTHO05D007553 3.7e-89 332.4 269 68.4
AT2G48120 Arabidopsis thaliana HOM05D006016 ORTHO05D007553 1.1e-88 330.9 275 66.9
BNapus_Darmor_BZH_scaffold_188p00120 Brassica napus HOM05D006016 ORTHO05D007553 1.0e-86 324.3 225 74.2
BNapus_Darmor_BZH_scaffold_188p00130 Brassica napus HOM05D006016 ORTHO05D007553 1.0e-86 324.3 225 74.2
Dinv32962 Davidia involucrata HOM05D006016 ORTHO05D007553 3.4e-82 309.3 185 84.9
BcaC02g12566 Brassica carinata HOM05D006016 ORTHO05D007553 2.9e-81 306.2 315 60.3
SEGI_37912 Sequoiadendron giganteum HOM05D006016 ORTHO05D007553 4.6e-79 298.9 275 60.7
Hma1.2p1_0628F.1_g191890 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 2.1e-76 290.0 237 70.5
vmacro14936 Vaccinium macrocarpon HOM05D006016 ORTHO05D007553 2.1e-76 290.0 321 56.7
arahy.Tifrunner.gnm1.ann1.9IJ3BZ Arachis hypogaea HOM05D006016 ORTHO05D007553 2.8e-76 289.7 281 59.8
QL10p008835 Quercus lobata HOM05D006016 ORTHO05D007553 2.6e-74 283.1 189 81.5
Actinidia21099 Actinidia chinensis HOM05D006016 ORTHO05D007553 3.9e-70 269.2 261 62.8
BolSC55t61219H Brassica oleracea HOM05D006016 ORTHO05D007553 5.1e-70 268.9 222 68.9
BolSC55t61223H Brassica oleracea HOM05D006016 ORTHO05D007553 4.9e-65 252.3 197 69.5
SMO360G0019 Selaginella moellendorffii HOM05D006016 ORTHO05D007553 1.5e-61 240.7 253 53.4
Mapoly0059s0024 Marchantia polymorpha HOM05D006016 ORTHO05D007553 1.8e-59 233.8 251 51.4
Pp3c5_15510 Physcomitrium patens HOM05D006016 ORTHO05D007553 6.9e-59 231.9 250 54.4
Glyma.02G149402 Glycine max HOM05D006016 ORTHO05D007553 5.8e-50 202.2 164 69.5
Lj9C654T2 Lonicera japonica HOM05D006016 ORTHO05D007553 1.9e-48 197.2 192 54.7
AagrBONN_evm.TU.Sc2ySwM_228.5509 Anthoceros agrestis HOM05D006016 ORTHO05D007553 4.8e-44 182.6 173 51.4
BraA05t18995Z Brassica rapa HOM05D006016 ORTHO05D007553 1.0e-38 164.9 128 65.6
BNapus_Darmor_BZH_scaffold_188p00100 Brassica napus HOM05D006016 ORTHO05D007553 2.4e-35 153.7 125 63.2
BNapus_Darmor_BZH_scaffold_188p00090 Brassica napus HOM05D001484 ORTHO05D007553 1.7e-33 147.5 106 79.2
Actinidia24878 Actinidia chinensis HOM05D006016 ORTHO05D007553 1.9e-32 144.1 188 50.5
Oeu001432.1 Olea europaea HOM05D006016 ORTHO05D007553 1.0e-30 138.3 98 72.4
CBR_g23747 Chara braunii HOM05D006016 ORTHO05D007553 1.8e-27 127.5 237 36.3
QL09p051040 Quercus lobata HOM05D006016 ORTHO05D007553 5.3e-27 125.9 120 58.3
AUR62004907 Chenopodium quinoa HOM05D006016 ORTHO05D007553 5.1e-22 109.4 78 74.4
QL09p050526 Quercus lobata HOM05D006016 ORTHO05D337571 5.3e-19 99.4 85 62.4
BcaC08g43234 Brassica carinata HOM05D006016 ORTHO05D007553 2.7e-15 87.0 68 58.8
MBI04_g32261_MAGBIO Magnolia biondii HOM05D006016 ORTHO05D007553 1.5e-13 81.3 71 60.6
Dinv13370 Davidia involucrata HOM05D006016 ORTHO05D007553 2.4e-11 73.9 99 49.5
Dinv01676 Davidia involucrata HOM05D006016 ORTHO05D007553 2.2e-09 67.4 65 63.1
Dinv16891 Davidia involucrata HOM05D006016 ORTHO05D007553 3.8e-09 66.6 65 66.2
QL09p050966 Quercus lobata HOM05D001484 ORTHO05D001564 3.8e-09 66.6 35 80.0
Lj9C654T3 Lonicera japonica HOM05D006016 ORTHO05D007553 2.5e-08 63.9 46 78.3
Medtr1g072620 Medicago truncatula HOM05D006016 ORTHO05D007553 4.7e-07 59.7 50 62.0
BolC6t35694H Brassica oleracea HOM05D006016 ORTHO05D007553 1.4e-06 58.2 62 56.5


User provided reference genes

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