Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K02286 Eucalyptus grandis HOM05D002170 ORTHO05D007478 1.6e-247 859.0 427 100.0
Haze_18913 Corylus avellana HOM05D002170 ORTHO05D007478 2.8e-212 741.9 428 87.4
MD14G1239300 Malus domestica HOM05D002170 ORTHO05D007478 1.1e-211 740.0 427 86.2
PGR044G0130 Punica granatum HOM05D002170 ORTHO05D007478 1.4e-211 739.6 429 86.0
Cfa020634 Carpinus fangiana HOM05D002170 ORTHO05D007478 3.1e-211 738.4 429 87.2
TWI81G0098 Tripterygium wilfordii HOM05D002170 ORTHO05D007478 2.6e-210 735.3 428 85.3
Lj2g0009559 Lotus japonicus HOM05D002170 ORTHO05D007478 4.4e-210 734.6 430 86.3
Thecc.03G062200 Theobroma cacao HOM05D002170 ORTHO05D007478 5.8e-210 734.2 427 85.5
CANSAT35G0706 Cannabis sativa HOM05D002170 ORTHO05D007478 7.6e-210 733.8 413 87.7
MD06G1232500 Malus domestica HOM05D002170 ORTHO05D007478 1.3e-209 733.0 427 85.5
Duzib084G0411 Durio zibethinus HOM05D002170 ORTHO05D007478 3.8e-209 731.5 427 85.0
Prupe.5G236800 Prunus persica HOM05D002170 ORTHO05D007478 6.4e-209 730.7 429 85.8
TAR629G0118 Trochodendron aralioides HOM05D002170 ORTHO05D007478 8.4e-209 730.3 427 84.3
CiPaw.16G097200 Carya illinoinensis HOM05D002170 ORTHO05D007478 2.4e-208 728.8 428 86.7
COL.COLO4_18962 Corchorus olitorius HOM05D002170 ORTHO05D005003 3.2e-208 728.4 436 84.6
Duzib068G1477 Durio zibethinus HOM05D002170 ORTHO05D007478 3.2e-208 728.4 427 84.3
Ca_25357_v3 Cicer arietinum L. HOM05D002170 ORTHO05D007478 5.4e-208 727.6 430 84.4
Gohir.A09G175200 Gossypium hirsutum HOM05D002170 ORTHO05D007478 7.1e-208 727.2 427 84.1
Gorai.006G191200 Gossypium raimondii HOM05D002170 ORTHO05D007478 7.1e-208 727.2 427 84.1
QL10p031496 Quercus lobata HOM05D002170 ORTHO05D007478 7.1e-208 727.2 428 85.5
ClCG04G010450 Citrullus lanatus HOM05D002170 ORTHO05D007478 1.2e-207 726.5 404 88.9
Lalb_Chr14g0370711 Lupinus albus HOM05D002170 ORTHO05D007478 1.2e-207 726.5 431 85.2
Glyma.07G105400 Glycine max HOM05D002170 ORTHO05D007478 4.6e-207 724.5 428 84.6
MELO3C002149.2 Cucumis melo HOM05D002170 ORTHO05D007478 6.0e-207 724.2 402 88.8
CsaV3_1G007330 Cucumis sativus L. HOM05D002170 ORTHO05D007478 7.8e-207 723.8 402 88.8
FvH4_5g17680 Fragaria vesca HOM05D002170 ORTHO05D007478 1.0e-206 723.4 435 83.9
Glyma.09G172700 Glycine max HOM05D002170 ORTHO05D007478 1.0e-206 723.4 428 84.6
FAN18G3495 Fragaria x ananassa HOM05D002170 ORTHO05D007478 1.3e-206 723.0 435 83.7
Sabra15G0025500 Salix brachista HOM05D002170 ORTHO05D007478 1.3e-206 723.0 430 84.9
Gohir.D09G169700 Gossypium hirsutum HOM05D002170 ORTHO05D007478 2.3e-206 722.2 427 83.6
Medtr6g071210 Medicago truncatula HOM05D002170 ORTHO05D007478 5.1e-206 721.1 396 89.4
Cpa.g.sc3.360 Carica papaya HOM05D002170 ORTHO05D007478 6.6e-206 720.7 430 85.1
Lalb_Chr22g0353421 Lupinus albus HOM05D002170 ORTHO05D007478 6.6e-206 720.7 431 84.5
arahy.Tifrunner.gnm1.ann1.DTQ5EB Arachis hypogaea HOM05D002170 ORTHO05D007478 8.7e-206 720.3 432 84.3
CSS0042449 Camellia sinensis var. sinensis HOM05D002170 ORTHO05D007478 8.7e-206 720.3 428 84.8
Potri.015G030600 Populus trichocarpa HOM05D002170 ORTHO05D007478 8.7e-206 720.3 430 84.2
CSS0009402 Camellia sinensis var. sinensis HOM05D002170 ORTHO05D007478 1.1e-205 719.9 428 84.8
Ciclev10020301m.g Citrus clementina HOM05D002170 ORTHO05D007478 1.1e-205 719.9 428 83.9
RcHm_v2.0_Chr7g0177971 Rosa chinensis HOM05D002170 ORTHO05D007478 1.5e-205 719.5 429 84.8
PGSC0003DMG400033683 Solanum tuberosum HOM05D002170 ORTHO05D007478 1.9e-205 719.2 436 83.9
TPR.G22320 Trifolium pratense HOM05D002170 ORTHO05D007478 1.9e-205 719.2 429 83.7
arahy.Tifrunner.gnm1.ann1.U6RNCV Arachis hypogaea HOM05D002170 ORTHO05D007478 3.3e-205 718.4 432 84.3
Manes.06G002900 Manihot esculenta HOM05D002170 ORTHO05D007478 3.3e-205 718.4 391 90.0
FAN08G0558 Fragaria x ananassa HOM05D002170 ORTHO05D007478 5.6e-205 717.6 435 83.4
Sopen03g028630 Solanum pennellii HOM05D002170 ORTHO05D007478 7.3e-205 717.2 437 83.1
FAN04G0031 Fragaria x ananassa HOM05D002170 ORTHO05D007478 9.6e-205 716.8 435 83.0
Phvul.004G148000 Phaseolus vulgaris HOM05D002170 ORTHO05D007478 9.6e-205 716.8 428 84.1
Solyc03g097910.4 Solanum lycopersicum HOM05D002170 ORTHO05D007478 9.6e-205 716.8 437 83.1
Sed0008892 Sechium edule HOM05D002170 ORTHO05D007478 3.6e-204 714.9 429 84.4
MSTRG.9351 Avicennia marina HOM05D002170 ORTHO05D007478 4.7e-204 714.5 427 84.1
THA.LOC104820334 Tarenaya hassleriana HOM05D002170 ORTHO05D007478 4.7e-204 714.5 402 87.1
SalBow5G3655 Salvia bowleyana HOM05D002170 ORTHO05D007478 1.1e-203 713.4 393 88.0
Sc04g0004500 Simmondsia chinensis HOM05D002170 ORTHO05D007478 1.4e-203 713.0 409 85.8
Hma1.2p1_0471F.1_g159440 Hydrangea macrophylla HOM05D002170 ORTHO05D007478 1.8e-203 712.6 435 83.4
Actinidia09052 Actinidia chinensis HOM05D002170 ORTHO05D007478 5.2e-203 711.1 386 89.6
Aqoxy3G04073 Aquilegia oxysepala HOM05D002170 ORTHO05D007478 9.0e-203 710.3 395 87.3
HanXRQChr16g0511571 Helianthus annuus HOM05D002170 ORTHO05D007478 1.2e-202 709.9 428 82.7
CAN.G637.44 Capsicum annuum HOM05D002170 ORTHO05D007478 3.4e-202 708.4 396 88.1
Atru.BG.197.p Acer truncatum HOM05D002170 ORTHO05D007478 5.8e-202 707.6 379 90.8
Rhsim08G0127800 Rhododendron simsii HOM05D002170 ORTHO05D007478 7.6e-202 707.2 410 85.1
ECA232G0406 Erigeron canadensis HOM05D002170 ORTHO05D007478 9.9e-202 706.8 399 86.5
Lj9C416G6 Lonicera japonica HOM05D002170 ORTHO05D007478 9.9e-202 706.8 415 84.1
Oeu023513.1 Olea europaea HOM05D002170 ORTHO05D007478 1.1e-200 703.4 406 86.2
Hund22449 Selenicereus undatus HOM05D002170 ORTHO05D007478 1.1e-200 703.4 397 87.4
Migut.D01219 Erythranthe guttata HOM05D002170 ORTHO05D007478 1.9e-200 702.6 429 83.4
vmacro17769 Vaccinium macrocarpon HOM05D002170 ORTHO05D007478 1.9e-200 702.6 392 87.8
HanXRQChr15g0492101 Helianthus annuus HOM05D002170 ORTHO05D007478 5.4e-200 701.0 395 87.6
CiPaw.15G147300 Carya illinoinensis HOM05D002170 ORTHO05D007478 1.6e-199 699.5 368 92.9
PSO339G1858 Papaver somniferum HOM05D002170 ORTHO05D007478 2.1e-199 699.1 427 81.3
PSO384G2182 Papaver somniferum HOM05D002170 ORTHO05D007478 2.1e-199 699.1 427 81.3
CDE06G2490 Ceratophyllum demersum HOM05D002170 ORTHO05D007478 3.5e-199 698.4 393 85.8
Ah.16g108010 Amaranthus hybridus HOM05D002170 ORTHO05D007478 2.3e-198 695.7 396 87.1
EL10Ac2g03531 Beta vulgaris HOM05D002170 ORTHO05D007478 2.3e-198 695.7 396 86.1
Cc04_g09360 Coffea canephora HOM05D002170 ORTHO05D007478 2.3e-198 695.7 432 81.2
CARHR093160 Cardamine hirsuta HOM05D002170 ORTHO05D007478 1.9e-197 692.6 401 84.0
Carub.0003s1752 Capsella rubella HOM05D002170 ORTHO05D007478 2.5e-197 692.2 426 80.3
DCAR_003532 Daucus carota HOM05D002170 ORTHO05D007478 2.5e-197 692.2 431 80.5
Lsat_1_v5_gn_0_10461 Lactuca sativa HOM05D002170 ORTHO05D007478 2.5e-197 692.2 423 81.1
GSVIVG01008478001 Vitis vinifera HOM05D002170 ORTHO05D007478 5.6e-197 691.0 368 92.1
A05p32010 Brassica napus HOM05D002170 ORTHO05D007478 4.8e-196 688.0 399 84.2
Peaxi162Scf00171g01030 Petunia axillaris HOM05D002170 ORTHO05D007478 4.8e-196 688.0 428 80.8
C05p48530 Brassica napus HOM05D002170 ORTHO05D007478 1.4e-195 686.4 399 84.0
Sp3g15930 Schrenkiella parvula HOM05D002170 ORTHO05D007478 1.4e-195 686.4 425 79.8
SEGI_10571 Sequoiadendron giganteum HOM05D002170 ORTHO05D007478 1.8e-195 686.0 429 79.0
AUR62041617 Chenopodium quinoa HOM05D002170 ORTHO05D007478 2.4e-195 685.6 395 84.6
Thhalv10020777m.g Eutrema salsugineum HOM05D002170 ORTHO05D007478 2.4e-195 685.6 428 79.4
BolC5t33589H Brassica oleracea HOM05D002170 ORTHO05D007478 2.6e-194 682.2 399 83.5
HPP92_007961 Vanilla planifolia HOM05D002170 ORTHO05D007478 4.5e-194 681.4 428 81.1
AT3G17810 Arabidopsis thaliana HOM05D002170 ORTHO05D007478 5.8e-194 681.0 425 79.3
Os02g0736400 Oryza sativa ssp. japonica HOM05D002170 ORTHO05D007478 9.9e-194 680.2 397 84.6
AL3G30970 Arabidopsis lyrata HOM05D002170 ORTHO05D007478 1.3e-193 679.9 425 79.1
BraA05t22032Z Brassica rapa HOM05D002170 ORTHO05D007478 1.1e-192 676.8 411 81.5
Zm00001eb253890 Zea mays HOM05D002170 ORTHO05D007478 1.1e-192 676.8 402 82.8
BcaB04g18965 Brassica carinata HOM05D002170 ORTHO05D007478 1.4e-192 676.4 403 82.6
BcaC09g48741 Brassica carinata HOM05D002170 ORTHO05D007478 5.4e-192 674.5 401 83.0
Atru.chr9.1597 Acer truncatum HOM05D002170 ORTHO05D007478 7.1e-192 674.1 397 84.6
BcaNung05883 Brassica carinata HOM05D002170 ORTHO05D007478 7.1e-192 674.1 405 82.2
A01p36570 Brassica napus HOM05D002170 ORTHO05D007478 7.1e-192 674.1 402 83.3
BcaB04g20814 Brassica carinata HOM05D002170 ORTHO05D007478 1.2e-191 673.3 398 83.4
C01p46400 Brassica napus HOM05D002170 ORTHO05D007478 2.7e-191 672.2 401 82.8
BolC1t04600H Brassica oleracea HOM05D002170 ORTHO05D007478 1.5e-189 666.4 401 82.3
Nitab4.5_0006581g0020 Nicotiana tabacum HOM05D002170 ORTHO05D007478 2.8e-188 662.1 432 79.6
BraA01t03721Z Brassica rapa HOM05D002170 ORTHO05D007478 4.8e-188 661.4 411 80.8
ATR0118G019 Amborella trichopoda HOM05D002170 ORTHO05D007478 8.1e-188 660.6 376 85.6
Aa31LG8G4690 Aethionema arabicum HOM05D002170 ORTHO05D007478 1.4e-187 659.8 466 73.0
Nitab4.5_0000430g0180 Nicotiana tabacum HOM05D002170 ORTHO05D007478 1.8e-187 659.4 433 79.0
AUR62036004 Chenopodium quinoa HOM05D002170 ORTHO05D007478 2.9e-185 652.1 368 86.4
Dinv05998 Davidia involucrata HOM05D002170 ORTHO05D007478 5.6e-181 637.9 381 83.5
Pp3c20_21870 Physcomitrium patens HOM05D002170 ORTHO05D007478 9.0e-179 630.6 403 76.9
AagrBONN_evm.TU.Sc2ySwM_362.1270 Anthoceros agrestis HOM05D002170 ORTHO05D007478 2.9e-177 625.5 386 76.2
Psat1g029560 Pisum sativum HOM05D002170 ORTHO05D007478 1.2e-175 620.2 345 87.8
SMO356G0689 Selaginella moellendorffii HOM05D002170 ORTHO05D007478 2.7e-175 619.0 409 74.6
Pp3c23_13670 Physcomitrium patens HOM05D002170 ORTHO05D007478 1.0e-174 617.1 425 73.2
Mapoly0033s0018 Marchantia polymorpha HOM05D002170 ORTHO05D007478 3.1e-171 605.5 382 75.9
CBR_g39071 Chara braunii HOM05D002170 ORTHO05D007478 4.2e-160 568.5 378 71.2
SHI19063 Sapria himalayana HOM05D002170 ORTHO05D007478 9.4e-160 567.4 331 81.3
BcaC01g03730 Brassica carinata HOM05D002170 ORTHO05D007478 3.9e-158 562.0 387 73.6
MCO10G163 Micromonas commoda HOM05D002170 ORTHO05D007478 3.3e-157 558.9 378 70.6
CDE04G1365 Ceratophyllum demersum HOM05D002170 ORTHO05D007478 5.7e-157 558.1 354 78.2
MBI19_g09384_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D004801 7.4e-157 557.8 305 89.8
PRCOL_00005290 Prasinoderma coloniale HOM05D002170 ORTHO05D007478 1.2e-151 540.4 369 71.3
Cre13.g578750 Chlamydomonas reinhardtii HOM05D002170 ORTHO05D007478 4.2e-144 515.4 378 65.1
unitig_27.g25082 Utricularia gibba HOM05D002170 ORTHO05D007478 9.7e-141 504.2 288 85.4
BolC3t17203H Brassica oleracea HOM05D002170 ORTHO05D007478 6.6e-129 464.9 299 77.9
C03p49210 Brassica napus HOM05D002170 ORTHO05D007478 7.2e-128 461.5 409 60.6
Potri.012G043300 Populus trichocarpa HOM05D002170 ORTHO05D007478 4.6e-114 415.6 267 79.4
Oeu016182.1 Olea europaea HOM05D002170 ORTHO05D007478 2.2e-108 396.7 280 73.9
SGA_v2.0_scaffold40G15643 Striga asiatica HOM05D002170 ORTHO05D007478 4.8e-71 272.7 186 78.0
Haze_26546 Corylus avellana HOM05D002170 ORTHO05D007478 1.8e-70 270.8 358 41.1
Haze_27328 Corylus avellana HOM05D002170 ORTHO05D007478 3.8e-68 263.1 334 41.6
SGA_v2.0_scaffold1356G53925 Striga asiatica HOM05D002170 ORTHO05D007478 2.2e-52 210.7 119 84.9
Solyc02g044040.3 Solanum lycopersicum HOM05D002170 ORTHO05D390875 6.3e-47 192.6 113 79.6
Phvul.008G096200 Phaseolus vulgaris HOM05D002170 ORTHO05D023792 3.9e-33 146.7 84 82.1
BraA03t13196Z Brassica rapa HOM05D002170 ORTHO05D023792 2.8e-31 140.6 84 82.1
A03p40410 Brassica napus HOM05D002170 ORTHO05D023792 2.4e-30 137.5 84 79.8
Psat3g071120 Pisum sativum HOM05D002170 ORTHO05D327785 2.6e-29 134.0 125 60.0
Ca_22557_v3 Cicer arietinum L. HOM05D002170 ORTHO05D148971 7.5e-24 115.9 57 89.5
unitig_27.g25081 Utricularia gibba HOM05D002170 ORTHO05D007478 2.8e-23 114.0 67 77.6
MSTRG.4628 Avicennia marina HOM05D002170 ORTHO05D023792 5.9e-21 106.3 76 69.7
MD05G1052900 Malus domestica HOM05D002170 ORTHO05D000222 2.7e-18 97.4 56 85.7
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 1.7e-15 88.2 273 29.3
Ca_03420_v3 Cicer arietinum L. HOM05D002170 ORTHO05D148646 6.1e-10 69.7 40 75.0
BcaB04g18967 Brassica carinata HOM05D002170 ORTHO05D023792 4.0e-09 67.0 66 56.1


User provided reference genes

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