Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I02538 Eucalyptus grandis HOM05D000806 ORTHO05D007429 5.5e-65 250.8 120 100.0
PGR111G0079 Punica granatum HOM05D000806 ORTHO05D007429 1.3e-58 229.6 120 91.7
Eucgr.E02608 Eucalyptus grandis HOM05D000806 ORTHO05D007429 1.1e-57 226.5 120 92.5
Gohir.A07G163672 Gossypium hirsutum HOM05D000806 ORTHO05D007429 1.9e-57 225.7 120 91.7
Nn010s41435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 4.2e-57 224.6 120 90.0
Nn265s45955 Nelumbo nucifera HOM05D000806 ORTHO05D007429 4.2e-57 224.6 120 90.0
Duzib198G0003 Durio zibethinus HOM05D000806 ORTHO05D002324 2.7e-56 221.9 117 91.5
Sed0015006 Sechium edule HOM05D000806 ORTHO05D007429 2.7e-56 221.9 120 89.2
Hma1.2p1_0035F.1_g021940 Hydrangea macrophylla HOM05D000806 ORTHO05D007429 6.0e-56 220.7 120 88.3
QL93p1043_0001 Quercus lobata HOM05D000806 ORTHO05D007429 6.0e-56 220.7 119 88.2
CAN.G3.24 Capsicum annuum HOM05D000806 ORTHO05D007429 7.9e-56 220.3 120 87.5
Migut.H01166 Erythranthe guttata HOM05D000806 ORTHO05D007429 7.9e-56 220.3 120 86.7
Migut.H01167 Erythranthe guttata HOM05D000806 ORTHO05D007429 7.9e-56 220.3 120 86.7
Potri.013G162400 Populus trichocarpa HOM05D000806 ORTHO05D007429 7.9e-56 220.3 120 88.3
DCAR_032495 Daucus carota HOM05D000806 ORTHO05D007429 1.0e-55 219.9 120 85.8
Gohir.A07G163690 Gossypium hirsutum HOM05D000806 ORTHO05D007429 1.3e-55 219.5 120 89.2
Lj2P1237T60 Lonicera japonica HOM05D000806 ORTHO05D007429 1.3e-55 219.5 120 88.3
Peaxi162Scf00041g00229 Petunia axillaris HOM05D000806 ORTHO05D007429 1.3e-55 219.5 118 87.3
RcHm_v2.0_CPg0502091 Rosa chinensis HOM05D000806 ORTHO05D007429 1.3e-55 219.5 120 88.3
Lalb_Chr23g0274521 Lupinus albus HOM05D000806 ORTHO05D007429 2.3e-55 218.8 120 88.3
PSO548G0038 Papaver somniferum HOM05D000806 ORTHO05D007429 3.0e-55 218.4 120 85.8
Peaxi162Scf00021g00088 Petunia axillaris HOM05D000806 ORTHO05D007429 5.1e-55 217.6 120 86.7
MELO3C027107.2 Cucumis melo HOM05D000806 ORTHO05D007429 6.7e-55 217.2 120 88.3
HanXRQChr01g0020361 Helianthus annuus HOM05D000806 ORTHO05D007429 6.7e-55 217.2 120 85.0
HanXRQChr02g0041571 Helianthus annuus HOM05D000806 ORTHO05D007429 6.7e-55 217.2 120 85.0
HanXRQChr10g0283551 Helianthus annuus HOM05D000806 ORTHO05D007429 6.7e-55 217.2 120 85.0
HanXRQChr10g0284241 Helianthus annuus HOM05D000806 ORTHO05D007429 6.7e-55 217.2 120 85.0
HanXRQChr10g0289261 Helianthus annuus HOM05D000806 ORTHO05D007429 6.7e-55 217.2 120 85.0
HanXRQChr10g0318201 Helianthus annuus HOM05D000806 ORTHO05D007429 6.7e-55 217.2 120 85.0
HanXRQChr11g0326821 Helianthus annuus HOM05D000806 ORTHO05D007429 6.7e-55 217.2 120 85.0
HanXRQChr13g0404911 Helianthus annuus HOM05D000806 ORTHO05D007429 6.7e-55 217.2 120 85.0
HanXRQCPg0580031 Helianthus annuus HOM05D000806 ORTHO05D007429 6.7e-55 217.2 120 85.0
TAR633G2212 Trochodendron aralioides HOM05D000890 ORTHO05D000697 6.7e-55 217.2 120 85.8
RcHm_v2.0_Chr5g0042981 Rosa chinensis HOM05D000806 ORTHO05D007429 8.7e-55 216.9 120 87.5
Gohir.A12G124900 Gossypium hirsutum HOM05D000806 ORTHO05D007429 5.7e-54 214.2 120 88.3
AUR62004684 Chenopodium quinoa HOM05D000806 ORTHO05D002320 7.4e-54 213.8 120 84.2
Sc22g0003430 Simmondsia chinensis HOM05D000806 ORTHO05D007429 1.6e-53 212.6 120 84.2
EL10Ac4g09266 Beta vulgaris HOM05D000806 ORTHO05D007429 3.7e-53 211.5 120 83.3
EL10Ac6g15047 Beta vulgaris HOM05D000806 ORTHO05D002324 4.8e-53 211.1 117 84.6
HanXRQChr11g0345151 Helianthus annuus HOM05D000806 ORTHO05D007429 1.4e-52 209.5 120 83.3
BraSC103t45466Z Brassica rapa HOM05D000806 ORTHO05D007429 3.1e-52 208.4 120 85.0
Hund28749 Selenicereus undatus HOM05D000806 ORTHO05D007429 3.1e-52 208.4 117 84.6
Hund28839 Selenicereus undatus HOM05D000806 ORTHO05D007429 3.1e-52 208.4 117 84.6
Hund31110 Selenicereus undatus HOM05D000806 ORTHO05D007429 3.1e-52 208.4 117 84.6
Sc03g0009990 Simmondsia chinensis HOM05D000806 ORTHO05D007429 3.1e-52 208.4 120 82.5
Ah.10g027160 Amaranthus hybridus HOM05D000806 ORTHO05D002324 5.3e-52 207.6 117 82.9
A06p23190 Brassica napus HOM05D000806 ORTHO05D007429 1.2e-51 206.5 120 84.2
C09p29600 Brassica napus HOM05D000806 ORTHO05D007429 1.2e-51 206.5 120 84.2
C09p40230 Brassica napus HOM05D000806 ORTHO05D007429 1.2e-51 206.5 120 84.2
BraSC140t45575Z Brassica rapa HOM05D000806 ORTHO05D007429 1.2e-51 206.5 120 84.2
BraSC25t45866Z Brassica rapa HOM05D000806 ORTHO05D007429 1.2e-51 206.5 120 84.2
BraSC59t46591Z Brassica rapa HOM05D000806 ORTHO05D007429 1.2e-51 206.5 120 84.2
ATCG00520 Arabidopsis thaliana HOM05D000806 ORTHO05D007429 1.5e-51 206.1 120 84.2
Hund29829 Selenicereus undatus HOM05D000806 ORTHO05D007429 3.4e-51 204.9 117 83.8
BolC9t56915H Brassica oleracea HOM05D000806 ORTHO05D007429 4.5e-51 204.5 120 83.3
CARHR282100 Cardamine hirsuta HOM05D000806 ORTHO05D007429 4.5e-51 204.5 120 83.3
BolSC35t60646H Brassica oleracea HOM05D000806 ORTHO05D007429 7.7e-51 203.8 120 83.3
BolSC35t60750H Brassica oleracea HOM05D000806 ORTHO05D007429 7.7e-51 203.8 120 83.3
BolSC46t61035H Brassica oleracea HOM05D000806 ORTHO05D007429 7.7e-51 203.8 120 83.3
BolSC47t61097H Brassica oleracea HOM05D000806 ORTHO05D007429 7.7e-51 203.8 120 83.3
BolSC49t61183H Brassica oleracea HOM05D000806 ORTHO05D007429 7.7e-51 203.8 120 83.3
Hund03830 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.7e-50 202.6 117 82.9
AL2G20666 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 2.2e-50 202.2 117 83.8
AL2G21550 Arabidopsis lyrata HOM05D000806 ORTHO05D007429 2.2e-50 202.2 119 83.2
Thhalv10010960m.g Eutrema salsugineum HOM05D000806 ORTHO05D007429 1.9e-49 199.1 120 81.7
Lsat_1_v5_gn_9_43721 Lactuca sativa HOM05D000806 ORTHO05D007429 1.9e-49 199.1 120 79.2
HanXRQChr15g0474091 Helianthus annuus HOM05D000806 ORTHO05D007429 4.2e-49 198.0 120 80.0
CDE02G2600 Ceratophyllum demersum HOM05D000806 ORTHO05D002320 4.6e-48 194.5 113 81.4
BolSC29t60467H Brassica oleracea HOM05D000806 ORTHO05D007429 1.4e-47 193.0 119 78.2
Haze_07716 Corylus avellana HOM05D000806 ORTHO05D007429 8.8e-47 190.3 120 79.2
Nitab4.5_0007680g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 9.7e-46 186.8 117 78.6
Gorai.004G061100 Gossypium raimondii HOM05D000806 ORTHO05D007429 2.8e-45 185.3 113 77.9
SEGI_09545 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 1.2e-43 179.9 120 72.5
Gohir.1Z049999 Gossypium hirsutum HOM05D000806 ORTHO05D002320 2.0e-43 179.1 98 89.8
HanXRQChr16g0528981 Helianthus annuus HOM05D000806 ORTHO05D007429 2.6e-43 178.7 119 70.6
Gohir.D01G102333 Gossypium hirsutum HOM05D000806 ORTHO05D002320 5.9e-43 177.6 98 88.8
Solyc00g500066.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 1.3e-42 176.4 103 82.5
Dinv26731 Davidia involucrata HOM05D001133 ORTHO05D000941 3.8e-42 174.9 97 86.6
Dinv29307 Davidia involucrata HOM05D001133 ORTHO05D000941 3.8e-42 174.9 97 86.6
Solyc00g500019.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 6.5e-42 174.1 96 86.5
Sabra10G0056300 Salix brachista HOM05D000806 ORTHO05D002320 1.4e-41 172.9 97 87.6
Sopen07g012430 Solanum pennellii HOM05D000004 ORTHO05D002324 2.5e-41 172.2 94 86.2
QL93p0311_0018 Quercus lobata HOM05D000806 ORTHO05D002320 3.2e-41 171.8 97 84.5
SEGI_20028 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 5.5e-41 171.0 115 71.3
Cfa021575 Carpinus fangiana HOM05D000806 ORTHO05D002324 7.2e-41 170.6 94 87.2
SEGI_23528 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 7.2e-41 170.6 119 68.9
Lj2C1239T39 Lonicera japonica HOM05D000806 ORTHO05D002320 9.4e-41 170.2 96 86.5
SEGI_10580 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 9.4e-41 170.2 113 72.6
SabraPtG0003400 Salix brachista HOM05D000806 ORTHO05D002324 2.7e-40 168.7 94 87.2
ECA074G0009 Erigeron canadensis HOM05D000806 ORTHO05D002324 6.1e-40 167.5 95 81.1
ECA077G0001 Erigeron canadensis HOM05D000806 ORTHO05D002324 6.1e-40 167.5 95 81.1
Nn010s41444 Nelumbo nucifera HOM05D000806 ORTHO05D007429 6.1e-40 167.5 120 71.7
SEGI_09273 Sequoiadendron giganteum HOM05D000806 ORTHO05D007429 6.1e-40 167.5 113 71.7
unitig_91.g26508 Utricularia gibba HOM05D000806 ORTHO05D002320 1.0e-39 166.8 98 80.6
CsaV3_UNG209270 Cucumis sativus L. HOM05D000806 ORTHO05D007429 1.4e-39 166.4 94 87.2
Gorai.011G115400 Gossypium raimondii HOM05D000806 ORTHO05D007429 5.1e-39 164.5 92 84.8
EL10As1g23054 Beta vulgaris HOM05D000806 ORTHO05D002324 6.7e-39 164.1 95 81.1
Solyc10g045220.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 8.8e-39 163.7 117 70.1
HanXRQChr02g0038641 Helianthus annuus HOM05D000806 ORTHO05D007429 1.5e-38 162.9 120 70.8
Ah.09g227360 Amaranthus hybridus HOM05D000806 ORTHO05D007429 2.0e-38 162.5 98 78.6
Gorai.004G277000 Gossypium raimondii HOM05D000806 ORTHO05D007429 5.7e-38 161.0 87 92.0
Hund31091 Selenicereus undatus HOM05D000806 ORTHO05D007429 5.7e-38 161.0 100 78.0
CAN.G1478.9 Capsicum annuum HOM05D000806 ORTHO05D002320 7.4e-38 160.6 94 80.9
Ah.10g027380 Amaranthus hybridus HOM05D000806 ORTHO05D007429 9.7e-38 160.2 94 79.8
Medtr0002s0680 Medicago truncatula HOM05D000806 ORTHO05D007429 2.2e-37 159.1 122 67.2
Ah.10g027510 Amaranthus hybridus HOM05D000806 ORTHO05D002324 2.8e-37 158.7 95 77.9
vmacro22411 Vaccinium macrocarpon HOM05D000806 ORTHO05D007429 2.8e-37 158.7 89 80.9
RhsimPtG0003100 Rhododendron simsii HOM05D000806 ORTHO05D002324 6.3e-37 157.5 102 70.6
Hund19837 Selenicereus undatus HOM05D000806 ORTHO05D007429 6.3e-37 157.5 93 82.8
Gohir.D11G225901 Gossypium hirsutum HOM05D000806 ORTHO05D007429 2.4e-36 155.6 93 77.4
Ah.03g144240 Amaranthus hybridus HOM05D000806 ORTHO05D002324 4.1e-36 154.8 92 78.3
Hund22773 Selenicereus undatus HOM05D000806 ORTHO05D007429 1.2e-35 153.3 89 82.0
Gohir.D04G129256 Gossypium hirsutum HOM05D000806 ORTHO05D002320 3.8e-34 148.3 91 81.3
Gohir.D10G105733 Gossypium hirsutum HOM05D000806 ORTHO05D007429 5.0e-34 147.9 88 78.4
Hund28451 Selenicereus undatus HOM05D000806 ORTHO05D007429 5.0e-34 147.9 117 65.8
Gohir.1Z050266 Gossypium hirsutum HOM05D000806 ORTHO05D002320 1.9e-33 146.0 86 83.7
EL10Ac9g20703 Beta vulgaris HOM05D000806 ORTHO05D007429 5.5e-33 144.4 98 69.4
Gorai.007G243500 Gossypium raimondii HOM05D000806 ORTHO05D007429 4.7e-32 141.4 78 83.3
Oeu062853.1 Olea europaea HOM05D000806 ORTHO05D007429 1.8e-31 139.4 86 80.2
GSVIVG01030619001 Vitis vinifera HOM05D000806 ORTHO05D007429 1.8e-31 139.4 87 82.8
LjContig00318g0003161 Lotus japonicus HOM05D000806 ORTHO05D007429 1.5e-30 136.3 126 54.8
Gorai.012G112600 Gossypium raimondii HOM05D000806 ORTHO05D007429 3.3e-30 135.2 98 69.4
Potri.016G094067 Populus trichocarpa HOM05D000806 ORTHO05D007429 9.7e-30 133.7 68 91.2
BraSC25t45848Z Brassica rapa HOM05D000806 ORTHO05D007429 2.8e-29 132.1 76 82.9
MCO14G322 Micromonas commoda HOM05D000806 ORTHO05D007429 5.3e-28 127.9 117 48.7
Phvul.002G278112 Phaseolus vulgaris HOM05D000806 ORTHO05D007429 7.0e-28 127.5 124 52.4
BraA10t43926Z Brassica rapa HOM05D000806 ORTHO05D007429 1.6e-27 126.3 81 76.5
Nn3g16863 Nelumbo nucifera HOM05D000806 ORTHO05D007429 1.6e-27 126.3 70 84.3
Nitab4.5_0004697g0020 Nicotiana tabacum HOM05D000806 ORTHO05D007429 7.7e-27 124.0 118 57.6
Hund27898 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.0e-26 123.6 94 63.8
Hund29706 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.0e-26 123.6 94 63.8
Hund29710 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.0e-26 123.6 94 63.8
Hund29827 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.0e-26 123.6 94 63.8
Hund29835 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.0e-26 123.6 94 63.8
Nitab4.5_0009663g0060 Nicotiana tabacum HOM05D000806 ORTHO05D007429 1.3e-26 123.2 66 86.4
VMungo0586G0001 Vigna mungo HOM05D000806 ORTHO05D007429 2.2e-26 122.5 125 50.4
Hund28893 Selenicereus undatus HOM05D000806 ORTHO05D002324 2.9e-26 122.1 77 75.3
Hund29727 Selenicereus undatus HOM05D000806 ORTHO05D002324 2.9e-26 122.1 77 75.3
Hund29858 Selenicereus undatus HOM05D000806 ORTHO05D002324 2.9e-26 122.1 77 75.3
Hund29866 Selenicereus undatus HOM05D000806 ORTHO05D002324 2.9e-26 122.1 77 75.3
Hund30695 Selenicereus undatus HOM05D000806 ORTHO05D002324 2.9e-26 122.1 77 75.3
Medtr4g034770 Medicago truncatula HOM05D000806 ORTHO05D002320 3.2e-25 118.6 121 48.8
EL10As15g24119 Beta vulgaris HOM05D000806 ORTHO05D002320 5.5e-25 117.9 96 62.5
Lalb_Chr25g0282881 Lupinus albus HOM05D000806 ORTHO05D007429 2.6e-22 109.0 64 85.9
SEGI_39120 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 7.5e-22 107.5 70 68.6
arahy.Tifrunner.gnm1.ann1.YJGE71 Arachis hypogaea HOM05D000806 ORTHO05D007429 4.8e-21 104.8 62 79.0
Sed0021403 Sechium edule HOM05D000806 ORTHO05D002324 8.3e-21 104.0 61 83.6
HanXRQChr09g0257581 Helianthus annuus HOM05D000806 ORTHO05D007429 1.1e-20 103.6 74 64.9
FAN12G3683 Fragaria x ananassa HOM05D000681 ORTHO05D035426 1.8e-20 102.8 91 61.5
Nitab4.5_0010235g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 3.1e-20 102.1 78 62.8
SMO086G0044 Selaginella moellendorffii HOM05D000806 ORTHO05D007429 1.2e-19 100.1 111 46.8
BolC9t58296H Brassica oleracea HOM05D000806 ORTHO05D007429 1.6e-19 99.8 64 78.1
CDE02G0843 Ceratophyllum demersum HOM05D001966 ORTHO05D007227 2.0e-19 99.4 62 75.8
Hund10571 Selenicereus undatus HOM05D000806 ORTHO05D007429 3.5e-19 98.6 110 50.0
HanXRQChr02g0044901 Helianthus annuus HOM05D000806 ORTHO05D007429 7.7e-19 97.4 47 89.4
arahy.Tifrunner.gnm1.ann1.Y8HZNS Arachis hypogaea HOM05D000806 ORTHO05D002320 1.7e-18 96.3 62 79.0
HanXRQChr09g0267831 Helianthus annuus HOM05D000806 ORTHO05D007429 2.2e-18 95.9 60 73.3
HanXRQChr11g0337941 Helianthus annuus HOM05D000806 ORTHO05D007429 6.5e-18 94.4 74 60.8
arahy.Tifrunner.gnm1.ann1.X4SEM1 Arachis hypogaea HOM05D000540 ORTHO05D000681 7.2e-17 90.9 61 77.0
ATR1137G001 Amborella trichopoda HOM05D000806 ORTHO05D007429 6.1e-16 87.8 55 76.4
Ah.10g027920 Amaranthus hybridus HOM05D000806 ORTHO05D002324 1.4e-15 86.7 53 75.5
Ah.10g028630 Amaranthus hybridus HOM05D000806 ORTHO05D002324 1.4e-15 86.7 53 75.5
Gohir.A07G166934 Gossypium hirsutum HOM05D000806 ORTHO05D007429 1.4e-15 86.7 41 92.7
FAN17G0466 Fragaria x ananassa HOM05D000806 ORTHO05D007429 5.2e-15 84.7 93 50.5
EL10As15g24117 Beta vulgaris HOM05D000806 ORTHO05D007429 1.5e-14 83.2 52 73.1
TAR371G0631 Trochodendron aralioides HOM05D000806 ORTHO05D007429 1.3e-13 80.1 49 77.6
BolSC46t61000H Brassica oleracea HOM05D000806 ORTHO05D007429 1.1e-12 77.0 47 76.6
CAN.G1163.7 Capsicum annuum HOM05D000806 ORTHO05D007429 1.4e-12 76.6 57 70.2
Nn1g07435 Nelumbo nucifera HOM05D000806 ORTHO05D007429 1.8e-12 76.3 41 78.0
Hund08021 Selenicereus undatus HOM05D002432 ORTHO05D000695 1.6e-11 73.2 49 73.5
SEGI_02123 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 2.0e-11 72.8 48 72.9
Solyc04g039810.1 Solanum lycopersicum HOM05D000806 ORTHO05D007429 1.7e-10 69.7 41 75.6
HanXRQChr08g0210351 Helianthus annuus HOM05D000806 ORTHO05D007429 2.9e-10 68.9 33 90.9
Sed0010807 Sechium edule HOM05D000806 ORTHO05D002320 1.5e-09 66.6 33 93.9
Sed0026664 Sechium edule HOM05D000806 ORTHO05D002320 1.5e-09 66.6 33 93.9
Solyc05g016120.2 Solanum lycopersicum HOM05D001387 ORTHO05D001250 9.5e-09 63.9 47 68.1
SEGI_16956 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 1.6e-08 63.2 49 67.3
Nn021s41539 Nelumbo nucifera HOM05D000806 ORTHO05D007429 1.0e-07 60.5 35 74.3
Migut.H00990 Erythranthe guttata HOM05D000806 ORTHO05D007429 1.4e-07 60.1 36 83.3
SGA_v2.0_scaffold213G42216 Striga asiatica HOM05D000806 ORTHO05D007429 1.8e-07 59.7 36 69.4
FAN07G1499 Fragaria x ananassa HOM05D000806 ORTHO05D007429 5.7e-06 54.7 54 55.6


User provided reference genes

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