Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01565 Eucalyptus grandis HOM05D005235 ORTHO05D006938 6.4e-266 920.2 480 100.0
PGR142G4255 Punica granatum HOM05D005235 ORTHO05D006938 3.2e-209 731.9 478 79.7
Gohir.D01G037300 Gossypium hirsutum HOM05D005235 ORTHO05D006938 3.3e-206 721.8 482 77.0
Gohir.A01G046600 Gossypium hirsutum HOM05D005235 ORTHO05D006938 8.2e-205 717.2 481 76.7
Gorai.002G045400 Gossypium raimondii HOM05D005235 ORTHO05D006938 8.2e-205 717.2 482 76.8
Manes.04G096400 Manihot esculenta HOM05D005235 ORTHO05D006938 9.1e-204 713.8 483 76.8
Glyma.14G202100 Glycine max HOM05D005235 ORTHO05D006938 3.5e-203 711.8 474 77.0
COL.COLO4_17457 Corchorus olitorius HOM05D005235 ORTHO05D000503 4.5e-203 711.4 451 79.2
TAR626G0946 Trochodendron aralioides HOM05D005235 ORTHO05D006938 1.3e-202 709.9 457 78.1
Aqoxy1G00862 Aquilegia oxysepala HOM05D005235 ORTHO05D006938 3.8e-202 708.4 453 77.5
Duzib213G0463 Durio zibethinus HOM05D005235 ORTHO05D006938 3.8e-202 708.4 477 76.5
CsaV3_4G004390 Cucumis sativus L. HOM05D005235 ORTHO05D006938 6.5e-202 707.6 453 79.0
ClCG07G017190 Citrullus lanatus HOM05D005235 ORTHO05D006938 2.5e-201 705.7 480 75.8
Thecc.07G135900 Theobroma cacao HOM05D005235 ORTHO05D006938 2.1e-200 702.6 474 75.5
Potri.014G140400 Populus trichocarpa HOM05D005235 ORTHO05D006938 2.7e-200 702.2 468 76.9
Nn6g33287 Nelumbo nucifera HOM05D005235 ORTHO05D006938 6.1e-200 701.0 456 77.2
MELO3C017627.2 Cucumis melo HOM05D005235 ORTHO05D006938 8.0e-200 700.7 474 75.3
Cfa002235 Carpinus fangiana HOM05D005235 ORTHO05D006938 1.0e-199 700.3 458 76.6
Haze_25416 Corylus avellana HOM05D005235 ORTHO05D006938 1.4e-199 699.9 457 76.6
TPR.G24949 Trifolium pratense HOM05D005235 ORTHO05D006938 1.8e-199 699.5 486 74.5
CANSAT21G0039 Cannabis sativa HOM05D005235 ORTHO05D006938 3.0e-199 698.7 453 77.9
Sabra14G0105800 Salix brachista HOM05D005235 ORTHO05D006938 3.0e-199 698.7 468 76.3
arahy.Tifrunner.gnm1.ann1.0Z73T7 Arachis hypogaea HOM05D005235 ORTHO05D006938 2.0e-198 696.0 437 80.1
Medtr4g121070 Medicago truncatula HOM05D005235 ORTHO05D006938 4.4e-198 694.9 481 75.3
arahy.Tifrunner.gnm1.ann1.354T1Y Arachis hypogaea HOM05D005235 ORTHO05D006938 9.7e-198 693.7 446 79.1
Lj6g0011193 Lotus japonicus HOM05D005235 ORTHO05D006938 1.3e-197 693.3 442 78.5
Lj3g0002085 Lotus japonicus HOM05D005235 ORTHO05D006938 2.2e-197 692.6 445 79.8
Ciclev10015023m.g Citrus clementina HOM05D005235 ORTHO05D006938 2.8e-197 692.2 465 77.0
Medtr3g466250 Medicago truncatula HOM05D005235 ORTHO05D006938 3.7e-197 691.8 442 78.5
PSO566G0178 Papaver somniferum HOM05D005235 ORTHO05D006938 3.7e-197 691.8 481 72.1
Psat5g150600 Pisum sativum HOM05D005235 ORTHO05D006938 4.8e-197 691.4 493 73.8
Hund00893 Selenicereus undatus HOM05D005235 ORTHO05D006938 8.3e-197 690.6 433 77.8
EL10Ac7g16931 Beta vulgaris HOM05D005235 ORTHO05D006938 1.1e-196 690.3 485 72.2
TWI32G1353 Tripterygium wilfordii HOM05D005235 ORTHO05D006938 1.1e-196 690.3 458 76.6
Dinv25083 Davidia involucrata HOM05D005235 ORTHO05D006938 1.4e-196 689.9 461 76.6
Lalb_Chr15g0085971 Lupinus albus HOM05D005235 ORTHO05D006938 1.4e-196 689.9 500 72.4
QL10p019537 Quercus lobata HOM05D005235 ORTHO05D006938 1.4e-196 689.9 454 76.4
CiPaw.03G253600 Carya illinoinensis HOM05D005235 ORTHO05D006938 2.4e-196 689.1 435 77.9
THA.LOC104820931 Tarenaya hassleriana HOM05D005235 ORTHO05D006938 4.1e-196 688.3 481 72.3
Glyma.02G234500 Glycine max HOM05D005235 ORTHO05D006938 5.3e-196 688.0 481 75.1
Sed0026739 Sechium edule HOM05D005235 ORTHO05D006938 7.0e-196 687.6 464 75.0
AUR62033498 Chenopodium quinoa HOM05D005235 ORTHO05D006938 1.2e-195 686.8 462 74.2
FvH4_6g39550 Fragaria vesca HOM05D005235 ORTHO05D006938 1.2e-195 686.8 444 78.2
Phvul.008G249300 Phaseolus vulgaris HOM05D005235 ORTHO05D006938 1.6e-195 686.4 438 77.6
PSO173G0108 Papaver somniferum HOM05D005235 ORTHO05D006938 3.5e-195 685.3 481 71.7
Rhsim08G0037300 Rhododendron simsii HOM05D005235 ORTHO05D006938 3.5e-195 685.3 450 76.0
vmacro22930 Vaccinium macrocarpon HOM05D005235 ORTHO05D006938 5.9e-195 684.5 478 73.2
RcHm_v2.0_Chr7g0221241 Rosa chinensis HOM05D005235 ORTHO05D006938 7.7e-195 684.1 437 78.3
Ca_15026_v3 Cicer arietinum L. HOM05D005235 ORTHO05D006938 1.3e-194 683.3 444 77.9
VMungo0647G1084 Vigna mungo HOM05D005235 ORTHO05D006938 1.3e-194 683.3 467 75.2
MD15G1428200 Malus domestica HOM05D005235 ORTHO05D006938 1.7e-194 682.9 444 76.1
Atru.BG.29.p Acer truncatum HOM05D005235 ORTHO05D006938 2.2e-194 682.6 436 79.8
MD08G1236200 Malus domestica HOM05D005235 ORTHO05D006938 8.5e-194 680.6 478 72.6
Ah.08g210620 Amaranthus hybridus HOM05D005235 ORTHO05D006938 1.1e-193 680.2 471 72.8
AUR62028546 Chenopodium quinoa HOM05D005235 ORTHO05D006938 3.2e-193 678.7 462 73.4
Prupe.1G572900 Prunus persica HOM05D005235 ORTHO05D006938 3.2e-193 678.7 479 72.7
Sc01g0007490 Simmondsia chinensis HOM05D005235 ORTHO05D006938 4.2e-193 678.3 463 74.3
AT3G02660 Arabidopsis thaliana HOM05D005235 ORTHO05D006938 8.0e-192 674.1 476 73.1
Oeu061455.1 Olea europaea HOM05D005235 ORTHO05D006938 8.0e-192 674.1 455 75.2
AL3G12040 Arabidopsis lyrata HOM05D005235 ORTHO05D006938 1.8e-191 672.9 467 74.3
CARHR076660 Cardamine hirsuta HOM05D005235 ORTHO05D006938 6.8e-191 671.0 467 74.1
FAN13G2026 Fragaria x ananassa HOM05D005235 ORTHO05D006938 8.8e-191 670.6 486 72.0
HanXRQChr08g0226751 Helianthus annuus HOM05D005235 ORTHO05D006938 8.8e-191 670.6 437 76.2
Lsat_1_v5_gn_6_15261 Lactuca sativa HOM05D005235 ORTHO05D006938 1.5e-190 669.8 436 75.7
Cc03_g16140 Coffea canephora HOM05D005235 ORTHO05D006938 2.6e-190 669.1 465 73.3
FvH4_5g28930 Fragaria vesca HOM05D005235 ORTHO05D006938 4.4e-190 668.3 483 72.0
MBI04_g19169_MAGBIO Magnolia biondii HOM05D005235 ORTHO05D006938 2.8e-189 665.6 558 65.9
BNapus_Darmor_BZH_scaffold_122p00160 Brassica napus HOM05D005235 ORTHO05D006938 1.1e-188 663.7 494 70.2
Thhalv10020578m.g Eutrema salsugineum HOM05D005235 ORTHO05D006938 1.1e-188 663.7 490 70.6
BNapus_Darmor_BZH_scaffold_99p00190 Brassica napus HOM05D005235 ORTHO05D006938 1.8e-188 662.9 494 70.6
Sp3g01700 Schrenkiella parvula HOM05D005235 ORTHO05D006938 1.8e-188 662.9 438 75.8
BraA01t04625Z Brassica rapa HOM05D005235 ORTHO05D006938 1.6e-187 659.8 494 70.0
CSS0000006 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 4.5e-187 658.3 440 76.6
CSS0008907 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 4.5e-187 658.3 440 76.6
ECA233G3576 Erigeron canadensis HOM05D005235 ORTHO05D006938 4.5e-187 658.3 471 71.8
FAN18G1214 Fragaria x ananassa HOM05D005235 ORTHO05D006938 4.5e-187 658.3 477 71.7
BolC1t05885H Brassica oleracea HOM05D005235 ORTHO05D006938 5.9e-187 657.9 494 69.6
A03p33070 Brassica napus HOM05D005235 ORTHO05D006938 2.9e-186 655.6 498 69.5
BraA03t12477Z Brassica rapa HOM05D005235 ORTHO05D006938 2.9e-186 655.6 498 69.3
Actinidia37705 Actinidia chinensis HOM05D005235 ORTHO05D006938 1.5e-185 653.3 427 78.2
Sopen07g004450 Solanum pennellii HOM05D005235 ORTHO05D006938 1.9e-185 652.9 470 71.3
BcaC01g04429 Brassica carinata HOM05D005235 ORTHO05D006938 2.5e-185 652.5 446 74.0
BolC3t16290H Brassica oleracea HOM05D005235 ORTHO05D006938 2.5e-185 652.5 446 74.0
Aa31LG5G13140 Aethionema arabicum HOM05D005235 ORTHO05D006938 4.2e-185 651.7 438 74.0
FAN08G3020 Fragaria x ananassa HOM05D005235 ORTHO05D006938 4.2e-185 651.7 478 71.5
SalBow4G1042 Salvia bowleyana HOM05D005235 ORTHO05D006938 5.5e-185 651.4 435 74.9
CDE05G2156 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 9.5e-185 650.6 439 72.9
Migut.N01688 Erythranthe guttata HOM05D005235 ORTHO05D006938 9.5e-185 650.6 471 70.7
CDE05G0570 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 1.2e-184 650.2 438 72.4
Nitab4.5_0000949g0050 Nicotiana tabacum HOM05D005235 ORTHO05D006938 1.2e-184 650.2 497 67.8
Peaxi162Scf01038g00005 Petunia axillaris HOM05D005235 ORTHO05D006938 1.2e-184 650.2 460 71.1
CAN.G192.3 Capsicum annuum HOM05D005235 ORTHO05D006938 2.1e-184 649.4 496 69.2
Nitab4.5_0000491g0060 Nicotiana tabacum HOM05D005235 ORTHO05D006938 6.1e-184 647.9 498 67.7
DCAR_005998 Daucus carota HOM05D005235 ORTHO05D006938 1.8e-183 646.4 444 71.6
Solyc07g008530.1 Solanum lycopersicum HOM05D005235 ORTHO05D006938 2.3e-183 646.0 492 69.1
Migut.O00424 Erythranthe guttata HOM05D005235 ORTHO05D006938 6.8e-183 644.4 471 70.3
Os01g0500900 Oryza sativa ssp. japonica HOM05D005235 ORTHO05D006938 1.7e-181 639.8 490 66.9
unitig_22.g5329 Utricularia gibba HOM05D005235 ORTHO05D006938 3.7e-181 638.6 448 73.7
PGSC0003DMG400022992 Solanum tuberosum HOM05D005235 ORTHO05D006938 6.3e-181 637.9 499 67.9
ATR0021G047 Amborella trichopoda HOM05D005235 ORTHO05D006938 1.4e-180 636.7 491 67.0
Zm00001eb080850 Zea mays HOM05D005235 ORTHO05D006938 3.5e-179 632.1 465 68.8
SGA_v2.0_scaffold68G22803 Striga asiatica HOM05D005235 ORTHO05D006938 3.9e-178 628.6 489 67.7
Lj8A333T11 Lonicera japonica HOM05D005235 ORTHO05D006938 9.5e-177 624.0 492 66.7
Pp3c3_3070 Physcomitrium patens HOM05D005235 ORTHO05D006938 3.1e-167 592.4 432 67.8
Nitab4.5_0004867g0070 Nicotiana tabacum HOM05D000907 ORTHO05D000753 6.8e-167 591.3 459 67.3
AagrBONN_evm.TU.Sc2ySwM_368.429 Anthoceros agrestis HOM05D005235 ORTHO05D006938 7.5e-166 587.8 433 66.3
Mapoly0163s0012 Marchantia polymorpha HOM05D005235 ORTHO05D006938 6.4e-165 584.7 436 67.0
SMO200G0177 Selaginella moellendorffii HOM05D005235 ORTHO05D006938 2.4e-164 582.8 443 64.8
BcaB04g19392 Brassica carinata HOM05D005235 ORTHO05D006938 1.8e-159 566.6 496 63.7
SEGI_38902 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 1.8e-151 540.0 375 71.5
TAR633G2758 Trochodendron aralioides HOM05D005235 ORTHO05D006938 6.8e-151 538.1 310 84.8
MCO13G625 Micromonas commoda HOM05D005235 ORTHO05D006938 5.8e-150 535.0 460 58.5
GSVIVG01023528001 Vitis vinifera HOM05D005235 ORTHO05D006938 2.1e-147 526.6 467 62.1
FAN05G2159 Fragaria x ananassa HOM05D005235 ORTHO05D006938 4.0e-143 512.3 428 63.1
Cre13.g606050 Chlamydomonas reinhardtii HOM05D005235 ORTHO05D006938 2.1e-139 500.0 463 56.4
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 1.0e-138 497.7 439 62.4
PRCOL_00003633 Prasinoderma coloniale HOM05D005235 ORTHO05D006938 1.1e-135 487.6 525 51.6
CBR_g10848 Chara braunii HOM05D005235 ORTHO05D006938 3.9e-130 469.2 487 51.7
arahy.Tifrunner.gnm1.ann1.8HX8KM Arachis hypogaea HOM05D005235 ORTHO05D006938 6.7e-130 468.4 416 61.3
Actinidia19541 Actinidia chinensis HOM05D005235 ORTHO05D006938 8.4e-117 424.9 449 56.1
FAN04G0607 Fragaria x ananassa HOM05D005235 ORTHO05D006938 3.4e-102 376.3 234 78.2
BolC1t05886H Brassica oleracea HOM05D005235 ORTHO05D006938 2.7e-83 313.5 403 47.4
HPP92_015556 Vanilla planifolia HOM05D005235 ORTHO05D006938 8.0e-83 312.0 226 67.7
Pp3s58_130 Physcomitrium patens HOM05D005235 ORTHO05D006938 6.8e-82 308.9 432 38.4
Dinv11903 Davidia involucrata HOM05D005235 ORTHO05D006938 2.6e-81 307.0 388 50.0
C03p40250 Brassica napus HOM05D005235 ORTHO05D006938 1.8e-74 284.3 204 71.6
BNapus_Darmor_BZH_scaffold_133p00140 Brassica napus HOM05D005235 ORTHO05D032674 1.7e-69 267.7 237 62.4
BcaC09g47648 Brassica carinata HOM05D005235 ORTHO05D032674 2.3e-66 257.3 340 48.5
HPP92_015557 Vanilla planifolia HOM05D005235 ORTHO05D006938 4.0e-66 256.5 174 73.0
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 2.4e-63 247.3 463 33.9
Haze_27256 Corylus avellana HOM05D005235 ORTHO05D006938 4.9e-56 223.0 311 37.6
FAN04G0381 Fragaria x ananassa HOM05D005235 ORTHO05D006938 6.6e-53 212.6 170 67.1
Oeu046079.2 Olea europaea HOM05D002040 ORTHO05D002502 6.6e-53 212.6 397 38.0
BraA01t04657Z Brassica rapa HOM05D005235 ORTHO05D032674 8.4e-40 169.1 131 68.7
CDE05G3313 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 8.4e-40 169.1 113 69.0
FAN09G2876 Fragaria x ananassa HOM05D005235 ORTHO05D006938 9.9e-33 145.6 96 72.9
Oeu059313.1 Olea europaea HOM05D005235 ORTHO05D006938 2.6e-25 120.9 124 54.8
SEGI_05348 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 7.6e-25 119.4 67 83.6
arahy.Tifrunner.gnm1.ann1.J19R9Y Arachis hypogaea HOM05D005235 ORTHO05D038945 4.6e-22 110.2 57 91.2
Thecc.07G136200 Theobroma cacao HOM05D005235 ORTHO05D006938 2.3e-21 107.8 114 55.3
TAR633G1966 Trochodendron aralioides HOM05D005235 ORTHO05D006938 6.6e-21 106.3 61 85.2
SEGI_33043 Sequoiadendron giganteum HOM05D005235 ORTHO05D008256 1.3e-19 102.1 70 68.6
Nn1g04561 Nelumbo nucifera HOM05D005235 ORTHO05D038945 8.1e-19 99.4 85 62.4
Oeu038380.1 Olea europaea HOM05D007843 ORTHO05D003639 6.0e-14 83.2 64 62.5
BNapus_Darmor_BZH_scaffold_119p00120 Brassica napus HOM05D005235 ORTHO05D006938 2.3e-13 81.3 49 75.5
BNapus_Darmor_BZH_scaffold_97p00310 Brassica napus HOM05D005235 ORTHO05D006938 2.3e-13 81.3 49 75.5
BolC1t05887H Brassica oleracea HOM05D005235 ORTHO05D014124 4.8e-11 73.6 72 63.9
SEGI_20498 Sequoiadendron giganteum HOM05D037692 ORTHO05D385547 6.0e-06 56.6 47 59.6


User provided reference genes

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