Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03177 Eucalyptus grandis HOM05D006077 ORTHO05D007499 4.3e-49 197.6 95 100.0
Dinv37869 Davidia involucrata HOM05D006077 ORTHO05D007499 1.9e-44 182.2 95 90.5
Lsat_1_v5_gn_4_92920 Lactuca sativa HOM05D006077 ORTHO05D007499 4.2e-44 181.0 95 88.4
Haze_16030 Corylus avellana HOM05D006077 ORTHO05D007499 5.5e-44 180.6 95 90.5
PSO421G0038 Papaver somniferum HOM05D006077 ORTHO05D007499 5.5e-44 180.6 95 89.5
TAR636G2213 Trochodendron aralioides HOM05D006077 ORTHO05D007499 3.6e-43 177.9 95 89.5
CSS0011852 Camellia sinensis var. sinensis HOM05D006077 ORTHO05D007499 6.1e-43 177.2 95 89.5
PSO063G4040 Papaver somniferum HOM05D006077 ORTHO05D007499 6.1e-43 177.2 95 88.4
TWI75G1673 Tripterygium wilfordii HOM05D006077 ORTHO05D007499 1.0e-42 176.4 95 88.4
Aqoxy7G01092 Aquilegia oxysepala HOM05D006077 ORTHO05D007499 1.8e-42 175.6 95 87.4
ATR0598G320 Amborella trichopoda HOM05D006077 ORTHO05D007499 2.3e-42 175.3 95 88.4
Gohir.A05G405800 Gossypium hirsutum HOM05D006077 ORTHO05D007499 3.0e-42 174.9 95 88.4
Actinidia26028 Actinidia chinensis HOM05D006077 ORTHO05D007499 3.9e-42 174.5 95 88.4
Lalb_Chr01g0013591 Lupinus albus HOM05D006077 ORTHO05D007499 3.9e-42 174.5 95 87.4
Gohir.D04G009800 Gossypium hirsutum HOM05D006077 ORTHO05D007499 5.1e-42 174.1 95 87.4
Gorai.012G011600 Gossypium raimondii HOM05D006077 ORTHO05D007499 5.1e-42 174.1 95 87.4
TPR.G32491 Trifolium pratense HOM05D006077 ORTHO05D007499 6.7e-42 173.7 95 87.4
GSVIVG01016766001 Vitis vinifera HOM05D006077 ORTHO05D007499 8.8e-42 173.3 95 87.4
Thecc.06G119600 Theobroma cacao HOM05D006077 ORTHO05D007499 1.1e-41 172.9 95 87.4
arahy.Tifrunner.gnm1.ann1.G5XP6S Arachis hypogaea HOM05D006077 ORTHO05D007499 1.5e-41 172.6 95 86.3
arahy.Tifrunner.gnm1.ann1.G7AU8E Arachis hypogaea HOM05D006077 ORTHO05D007499 1.5e-41 172.6 95 86.3
ECA232G1087 Erigeron canadensis HOM05D006077 ORTHO05D007499 1.5e-41 172.6 94 85.1
Psat4g182400 Pisum sativum HOM05D006077 ORTHO05D007499 2.0e-41 172.2 95 86.3
TWI79G1574 Tripterygium wilfordii HOM05D006077 ORTHO05D007499 2.0e-41 172.2 95 86.3
Rhsim08G0238900 Rhododendron simsii HOM05D006077 ORTHO05D007499 2.6e-41 171.8 95 87.4
Glyma.16G007300 Glycine max HOM05D006077 ORTHO05D007499 3.3e-41 171.4 95 84.2
Phvul.010G130300 Phaseolus vulgaris HOM05D006077 ORTHO05D007499 4.4e-41 171.0 95 84.2
CiPaw.02G136000 Carya illinoinensis HOM05D006077 ORTHO05D007499 5.7e-41 170.6 93 88.2
Glyma.07G038100 Glycine max HOM05D006077 ORTHO05D007499 7.4e-41 170.2 95 85.3
Ciclev10026605m.g Citrus clementina HOM05D006077 ORTHO05D007499 9.7e-41 169.9 94 85.1
Lj3g0010947 Lotus japonicus HOM05D006077 ORTHO05D007499 9.7e-41 169.9 95 83.2
Peaxi162Scf00177g00511 Petunia axillaris HOM05D006077 ORTHO05D007499 9.7e-41 169.9 95 87.4
VMungo0331G1077 Vigna mungo HOM05D006077 ORTHO05D007499 9.7e-41 169.9 95 84.2
CDE11G1182 Ceratophyllum demersum HOM05D006077 ORTHO05D007499 1.3e-40 169.5 91 84.6
Ah.08g216780 Amaranthus hybridus HOM05D006077 ORTHO05D007499 1.7e-40 169.1 95 81.1
Sc15g0000510 Simmondsia chinensis HOM05D006077 ORTHO05D007499 2.8e-40 168.3 95 83.2
FvH4_6g34660 Fragaria vesca HOM05D006077 ORTHO05D007499 3.7e-40 167.9 94 83.0
FAN14G4463 Fragaria x ananassa HOM05D006077 ORTHO05D007499 3.7e-40 167.9 94 83.0
RcHm_v2.0_Chr2g0145211 Rosa chinensis HOM05D006077 ORTHO05D007499 4.8e-40 167.5 93 83.9
Hma1.2p1_0291F.1_g115130 Hydrangea macrophylla HOM05D006077 ORTHO05D007499 8.2e-40 166.8 96 84.4
CANSAT64G0122 Cannabis sativa HOM05D006077 ORTHO05D007499 1.1e-39 166.4 92 85.9
CANSAT64G2602 Cannabis sativa HOM05D006077 ORTHO05D007499 1.1e-39 166.4 92 85.9
Prupe.3G042200 Prunus persica HOM05D006077 ORTHO05D007499 1.1e-39 166.4 92 85.9
Migut.D00939 Erythranthe guttata HOM05D006077 ORTHO05D007499 1.4e-39 166.0 95 85.3
Sp3g12220 Schrenkiella parvula HOM05D006077 ORTHO05D007499 1.8e-39 165.6 95 84.2
FAN09G3570 Fragaria x ananassa HOM05D006077 ORTHO05D007499 2.4e-39 165.2 94 83.0
SalBow6G4082 Salvia bowleyana HOM05D006077 ORTHO05D007499 2.4e-39 165.2 86 91.9
SalBow6G4389 Salvia bowleyana HOM05D006077 ORTHO05D007499 2.4e-39 165.2 86 91.9
Solyc12g049310.2 Solanum lycopersicum HOM05D006077 ORTHO05D007499 2.4e-39 165.2 95 85.3
Sopen12g023790 Solanum pennellii HOM05D006077 ORTHO05D007499 2.4e-39 165.2 95 85.3
BcaB06g25414 Brassica carinata HOM05D006077 ORTHO05D007499 3.1e-39 164.9 95 84.2
AL3G26170 Arabidopsis lyrata HOM05D006077 ORTHO05D007499 4.1e-39 164.5 95 84.2
MD09G1183900 Malus domestica HOM05D006077 ORTHO05D007499 5.3e-39 164.1 93 82.8
Hund05739 Selenicereus undatus HOM05D006077 ORTHO05D007499 5.3e-39 164.1 95 81.1
Carub.0001s4344 Capsella rubella HOM05D006077 ORTHO05D007499 9.1e-39 163.3 95 82.1
CAN.G1368.2 Capsicum annuum HOM05D006077 ORTHO05D007499 9.1e-39 163.3 95 85.3
BcaB07g33246 Brassica carinata HOM05D006077 ORTHO05D007499 1.5e-38 162.5 95 82.1
BcaC05g29136 Brassica carinata HOM05D006077 ORTHO05D007499 2.0e-38 162.2 95 83.2
C05p53730 Brassica napus HOM05D006077 ORTHO05D007499 2.0e-38 162.2 95 83.2
CiPaw.01G218900 Carya illinoinensis HOM05D006077 ORTHO05D007499 2.0e-38 162.2 94 85.1
CARHR044580 Cardamine hirsuta HOM05D006077 ORTHO05D007499 3.4e-38 161.4 95 83.2
Thhalv10011896m.g Eutrema salsugineum HOM05D006077 ORTHO05D007499 5.9e-38 160.6 95 81.1
THA.LOC104822655 Tarenaya hassleriana HOM05D006077 ORTHO05D007499 5.9e-38 160.6 95 82.1
AT1G54210 Arabidopsis thaliana HOM05D006077 ORTHO05D007499 7.7e-38 160.2 93 82.8
Cc00_g21000 Coffea canephora HOM05D006077 ORTHO05D007499 7.7e-38 160.2 86 86.0
RcHm_v2.0_Chr5g0053491 Rosa chinensis HOM05D006077 ORTHO05D007499 1.0e-37 159.8 93 81.7
Hma1.2p1_0496F.1_g166240 Hydrangea macrophylla HOM05D006077 ORTHO05D007499 1.3e-37 159.5 83 89.2
Medtr8g020500 Medicago truncatula HOM05D006077 ORTHO05D007499 1.3e-37 159.5 84 89.3
BolC5t34043H Brassica oleracea HOM05D006077 ORTHO05D007499 2.2e-37 158.7 93 82.8
AL1G62920 Arabidopsis lyrata HOM05D006077 ORTHO05D007499 2.9e-37 158.3 95 81.1
RcHm_v2.0_Chr3g0490611 Rosa chinensis HOM05D006077 ORTHO05D007499 3.8e-37 157.9 91 82.4
Manes.11G020500 Manihot esculenta HOM05D006077 ORTHO05D007499 5.0e-37 157.5 94 78.7
SalBow6G7202 Salvia bowleyana HOM05D006077 ORTHO05D007499 5.0e-37 157.5 93 83.9
Carub.0003s1355 Capsella rubella HOM05D006077 ORTHO05D007499 8.5e-37 156.8 92 82.6
A05p35440 Brassica napus HOM05D006077 ORTHO05D007499 4.2e-36 154.5 95 80.0
A06p00460 Brassica napus HOM05D006077 ORTHO05D007499 2.7e-35 151.8 101 75.2
Mapoly0025s0134 Marchantia polymorpha HOM05D006077 ORTHO05D007499 4.7e-35 151.0 85 83.5
Pp3c4_29920 Physcomitrium patens HOM05D006077 ORTHO05D007499 6.1e-35 150.6 93 76.3
AagrBONN_evm.TU.Sc2ySwM_228.485 Anthoceros agrestis HOM05D006077 ORTHO05D007499 7.9e-35 150.2 85 81.2
BolC6t36071H Brassica oleracea HOM05D006077 ORTHO05D007499 7.9e-35 150.2 93 79.6
BraA06t23260Z Brassica rapa HOM05D006077 ORTHO05D007499 7.9e-35 150.2 93 79.6
Nn4g24846 Nelumbo nucifera HOM05D006077 ORTHO05D007499 1.0e-34 149.8 86 83.7
BcaB07g33245 Brassica carinata HOM05D006077 ORTHO05D007499 1.4e-34 149.4 84 84.5
BcaC08g43600 Brassica carinata HOM05D006077 ORTHO05D007499 1.4e-34 149.4 84 84.5
C06p09980 Brassica napus HOM05D006077 ORTHO05D007499 1.4e-34 149.4 84 84.5
Potri.003G064300 Populus trichocarpa HOM05D006077 ORTHO05D007499 1.4e-34 149.4 95 73.7
Zm00001eb256700 Zea mays HOM05D006077 ORTHO05D007499 1.4e-34 149.4 88 78.4
Aa31LG8G1170 Aethionema arabicum HOM05D006077 ORTHO05D007499 1.8e-34 149.1 103 73.8
FAN05G2137 Fragaria x ananassa HOM05D006077 ORTHO05D007499 1.8e-34 149.1 120 64.2
BraA05t22354Z Brassica rapa HOM05D006077 ORTHO05D007499 2.3e-34 148.7 84 84.5
Potri.001G169700 Populus trichocarpa HOM05D006077 ORTHO05D007499 2.3e-34 148.7 95 71.6
Sed0008411 Sechium edule HOM05D006077 ORTHO05D007499 6.7e-34 147.1 94 73.4
ClCG07G014030 Citrullus lanatus HOM05D006077 ORTHO05D007499 1.3e-32 142.9 94 71.3
CsaV3_3G043520 Cucumis sativus L. HOM05D006077 ORTHO05D007499 1.3e-32 142.9 94 71.3
MELO3C025809.2 Cucumis melo HOM05D006077 ORTHO05D007499 1.7e-32 142.5 94 71.3
Os06g0205000 Oryza sativa ssp. japonica HOM05D006077 ORTHO05D007499 8.2e-32 140.2 86 73.3
vmacro15032 Vaccinium macrocarpon HOM05D006077 ORTHO05D007499 2.0e-30 135.6 79 87.3
Manes.04G144301 Manihot esculenta HOM05D006077 ORTHO05D007499 1.3e-29 132.9 81 76.5
Sed0025034 Sechium edule HOM05D006077 ORTHO05D007499 1.3e-29 132.9 94 67.0
unitig_699.g19648 Utricularia gibba HOM05D002868 ORTHO05D003477 1.7e-29 132.5 84 77.4
Duzib235G0120 Durio zibethinus HOM05D006077 ORTHO05D007499 1.5e-28 129.4 74 85.1
COL.COLO4_30761 Corchorus olitorius HOM05D006077 ORTHO05D007499 1.9e-28 129.0 78 83.3
Duzib192G0164 Durio zibethinus HOM05D006077 ORTHO05D007499 1.6e-27 125.9 74 82.4
QL05p007703 Quercus lobata HOM05D006077 ORTHO05D007499 3.6e-27 124.8 64 90.6
EL10Ac7g16407 Beta vulgaris HOM05D006077 ORTHO05D007499 6.1e-27 124.0 74 78.4
Oeu015484.1 Olea europaea HOM05D006077 ORTHO05D007499 1.4e-26 122.9 74 83.8
SGA_v2.0_scaffold4G02063 Striga asiatica HOM05D006077 ORTHO05D007499 1.4e-26 122.9 83 72.3
CANSAT25G1718 Cannabis sativa HOM05D006077 ORTHO05D007499 1.8e-26 122.5 71 83.1
CBR_g34185 Chara braunii HOM05D000019 ORTHO05D001702 1.5e-25 119.4 73 75.3
Sabra03G0038000 Salix brachista HOM05D006077 ORTHO05D007499 2.6e-25 118.6 74 74.3
Nitab4.5_0000189g0210 Nicotiana tabacum HOM05D006077 ORTHO05D007499 3.3e-25 118.2 95 67.4
Nitab4.5_0001199g0100 Nicotiana tabacum HOM05D006077 ORTHO05D007499 3.3e-25 118.2 95 67.4
Thhalv10021863m.g Eutrema salsugineum HOM05D006077 ORTHO05D007499 7.5e-25 117.1 95 65.3
FAN02G4125 Fragaria x ananassa HOM05D006077 ORTHO05D007499 9.7e-25 116.7 97 61.9
CARHR088790 Cardamine hirsuta HOM05D006077 ORTHO05D007499 2.2e-24 115.5 74 77.0
RcHm_v2.0_Chr5g0040601 Rosa chinensis HOM05D006077 ORTHO05D007499 4.8e-24 114.4 71 76.1
AUR62009882 Chenopodium quinoa HOM05D006077 ORTHO05D007499 3.1e-23 111.7 67 76.1
HPP92_019155 Vanilla planifolia HOM05D006077 ORTHO05D007499 9.1e-23 110.2 74 71.6
SMO364G0450 Selaginella moellendorffii HOM05D006077 ORTHO05D007499 1.2e-19 99.8 83 53.0
MCO16G375 Micromonas commoda HOM05D006077 ORTHO05D007499 1.6e-19 99.4 98 55.1
PRCOL_00003774 Prasinoderma coloniale HOM05D006077 ORTHO05D007499 1.4e-18 96.3 85 48.2
CSS0028385 Camellia sinensis var. sinensis HOM05D006077 ORTHO05D007499 2.0e-17 92.4 54 83.3
PGSC0003DMG400011604 Solanum tuberosum HOM05D006077 ORTHO05D007499 1.7e-16 89.4 45 88.9
CDE05G1235 Ceratophyllum demersum HOM05D006077 ORTHO05D007499 3.7e-16 88.2 75 64.0
AT3G13970 Arabidopsis thaliana HOM05D006077 ORTHO05D007499 4.1e-15 84.7 56 71.4
Atru.chr1.3943 Acer truncatum HOM05D006077 ORTHO05D007499 1.7e-13 79.3 78 57.7
Cre12.g557000 Chlamydomonas reinhardtii HOM05D006077 ORTHO05D007499 2.3e-13 79.0 85 45.9
DCAR_022696 Daucus carota HOM05D006077 ORTHO05D007499 4.2e-12 74.7 40 85.0
Aa31sc1971G10 Aethionema arabicum HOM05D006077 ORTHO05D007499 6.3e-08 60.8 99 37.4
Aa31LG10G1230 Aethionema arabicum HOM05D006077 ORTHO05D007499 2.4e-07 58.9 99 37.4
FAN24G1797 Fragaria x ananassa HOM05D006077 ORTHO05D007499 7.8e-06 53.9 36 63.9


User provided reference genes

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