Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E01989 Eucalyptus grandis HOM05D000070 ORTHO05D006627 5.2e-69 264.2 130 100.0
Sopen04g025820 Solanum pennellii HOM05D000070 ORTHO05D006627 9.3e-10 67.4 43 76.7
Eucgr.E02009 Eucalyptus grandis HOM05D000070 ORTHO05D006627 1.2e-09 67.0 42 83.3
Dinv05863 Davidia involucrata HOM05D000070 ORTHO05D006627 1.6e-09 66.6 43 81.4
CSS0018377 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D006627 2.7e-09 65.9 44 77.3
CSS0020064 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D006627 2.7e-09 65.9 44 77.3
CANSAT35G0895 Cannabis sativa HOM05D000070 ORTHO05D006627 2.7e-09 65.9 46 71.7
CAN.G405.6 Capsicum annuum HOM05D000070 ORTHO05D006627 6.0e-09 64.7 43 76.7
Nitab4.5_0003485g0050 Nicotiana tabacum HOM05D000070 ORTHO05D006627 6.0e-09 64.7 47 68.1
QL11p017850 Quercus lobata HOM05D000070 ORTHO05D006627 6.0e-09 64.7 43 76.7
Solyc04g057960.4 Solanum lycopersicum HOM05D000070 ORTHO05D006627 7.8e-09 64.3 43 74.4
Hma1.2p1_1220F.1_g268010 Hydrangea macrophylla HOM05D000070 ORTHO05D006627 1.7e-08 63.2 43 79.1
PGR102G0872 Punica granatum HOM05D000070 ORTHO05D006627 1.7e-08 63.2 43 76.7
Actinidia01326 Actinidia chinensis HOM05D000070 ORTHO05D006627 3.0e-08 62.4 43 74.4
Ah.15g098730 Amaranthus hybridus HOM05D000070 ORTHO05D006627 3.0e-08 62.4 43 74.4
Oeu040394.2 Olea europaea HOM05D000070 ORTHO05D006627 3.0e-08 62.4 43 72.1
Glyma.07G224000 Glycine max HOM05D000070 ORTHO05D006627 3.9e-08 62.0 43 72.1
Rhsim01G0112400 Rhododendron simsii HOM05D000070 ORTHO05D006627 5.1e-08 61.6 42 73.8
Ciclev10014090m.g Citrus clementina HOM05D000070 ORTHO05D006627 6.6e-08 61.2 43 69.8
DCAR_014363 Daucus carota HOM05D000070 ORTHO05D006627 6.6e-08 61.2 46 65.2
Migut.C01080 Erythranthe guttata HOM05D000070 ORTHO05D006627 6.6e-08 61.2 44 65.9
Nitab4.5_0000317g0130 Nicotiana tabacum HOM05D000070 ORTHO05D006627 6.6e-08 61.2 46 65.2
vmacro20772 Vaccinium macrocarpon HOM05D000070 ORTHO05D006627 6.6e-08 61.2 57 63.2
Gorai.011G051500 Gossypium raimondii HOM05D000070 ORTHO05D006627 1.1e-07 60.5 43 74.4
SGA_v2.0_scaffold2748G54197 Striga asiatica HOM05D000070 ORTHO05D006627 1.1e-07 60.5 43 69.8
Cpa.g.sc138.31 Carica papaya HOM05D000070 ORTHO05D006627 1.5e-07 60.1 43 72.1
EL10Ac2g02462 Beta vulgaris HOM05D000070 ORTHO05D006627 1.9e-07 59.7 43 69.8
AUR62024782 Chenopodium quinoa HOM05D000070 ORTHO05D006627 1.9e-07 59.7 43 72.1
AUR62032439 Chenopodium quinoa HOM05D000070 ORTHO05D006627 1.9e-07 59.7 43 72.1
CiPaw.02G023600 Carya illinoinensis HOM05D000070 ORTHO05D006627 2.5e-07 59.3 48 68.8
ClCG01G008970 Citrullus lanatus HOM05D000070 ORTHO05D006627 2.5e-07 59.3 43 72.1
Haze_04406 Corylus avellana HOM05D000070 ORTHO05D006627 2.5e-07 59.3 43 72.1
Atru.chr10.621 Acer truncatum HOM05D000070 ORTHO05D006627 3.3e-07 58.9 43 67.4
Lj4g0001942 Lotus japonicus HOM05D000070 ORTHO05D006627 3.3e-07 58.9 43 65.1
Peaxi162Scf00066g00526 Petunia axillaris HOM05D000070 ORTHO05D006627 3.3e-07 58.9 46 65.2
Hund09412 Selenicereus undatus HOM05D000070 ORTHO05D006627 3.3e-07 58.9 43 69.8
Sc07g0007680 Simmondsia chinensis HOM05D000070 ORTHO05D006627 4.3e-07 58.5 43 69.8
MELO3C021783.2 Cucumis melo HOM05D000070 ORTHO05D006627 5.6e-07 58.2 43 69.8
Sed0002344 Sechium edule HOM05D000070 ORTHO05D006627 5.6e-07 58.2 43 67.4
TAR626G1726 Trochodendron aralioides HOM05D000070 ORTHO05D006627 5.6e-07 58.2 43 69.8
COL.COLO4_30925 Corchorus olitorius HOM05D000070 ORTHO05D006627 7.3e-07 57.8 43 69.8
CsaV3_1G046740 Cucumis sativus L. HOM05D000070 ORTHO05D006627 7.3e-07 57.8 43 67.4
TPR.G9706 Trifolium pratense HOM05D000070 ORTHO05D006627 9.6e-07 57.4 43 62.8
MBI01_g11418_MAGBIO Magnolia biondii HOM05D000070 ORTHO05D006627 1.3e-06 57.0 43 67.4
PSO675G1403 Papaver somniferum HOM05D000070 ORTHO05D006627 1.3e-06 57.0 43 69.8
HanXRQChr02g0040551 Helianthus annuus HOM05D000070 ORTHO05D006627 1.6e-06 56.6 43 67.4
Lj4A664G63 Lonicera japonica HOM05D000070 ORTHO05D006627 1.6e-06 56.6 44 65.9
Lj4A674G56 Lonicera japonica HOM05D000070 ORTHO05D006627 1.6e-06 56.6 44 65.9
Cc10_g13650 Coffea canephora HOM05D000070 ORTHO05D006627 2.1e-06 56.2 41 70.7
Duzib192G0613 Durio zibethinus HOM05D000070 ORTHO05D006627 2.1e-06 56.2 43 69.8
Thhalv10012497m.g Eutrema salsugineum HOM05D000070 ORTHO05D006627 2.1e-06 56.2 42 66.7
PSO541G5972 Papaver somniferum HOM05D000070 ORTHO05D006627 2.1e-06 56.2 43 65.1
Ca_18785_v3 Cicer arietinum L. HOM05D000070 ORTHO05D006627 2.8e-06 55.8 43 60.5
Lalb_Chr05g0219821 Lupinus albus HOM05D000070 ORTHO05D006627 2.8e-06 55.8 43 62.8
Thecc.06G135300 Theobroma cacao HOM05D000070 ORTHO05D006627 2.8e-06 55.8 43 72.1
Psat7g132840 Pisum sativum HOM05D000070 ORTHO05D006627 3.6e-06 55.5 43 60.5
GSVIVG01013614001 Vitis vinifera HOM05D000070 ORTHO05D006627 3.6e-06 55.5 41 70.7
ATR0763G153 Amborella trichopoda HOM05D000070 ORTHO05D006627 4.8e-06 55.1 43 65.1
Aqoxy1G01537 Aquilegia oxysepala HOM05D000070 ORTHO05D006627 4.8e-06 55.1 43 65.1
FvH4_3g12310 Fragaria vesca HOM05D000070 ORTHO05D006627 4.8e-06 55.1 42 66.7
FAN16G0001 Fragaria x ananassa HOM05D000070 ORTHO05D006627 4.8e-06 55.1 42 66.7
FAN21G2030 Fragaria x ananassa HOM05D000070 ORTHO05D006627 4.8e-06 55.1 42 66.7
Nn7g37939 Nelumbo nucifera HOM05D000070 ORTHO05D006627 4.8e-06 55.1 43 62.8
Potri.001G174100 Populus trichocarpa HOM05D000070 ORTHO05D006627 6.2e-06 54.7 43 67.4
RcHm_v2.0_Chr5g0020121 Rosa chinensis HOM05D000070 ORTHO05D006627 6.2e-06 54.7 42 66.7
SalBow7G0065 Salvia bowleyana HOM05D000070 ORTHO05D006627 6.2e-06 54.7 43 62.8
BcaB08g37256 Brassica carinata HOM05D000070 ORTHO05D006627 8.1e-06 54.3 41 65.9
Sp6g34430 Schrenkiella parvula HOM05D000070 ORTHO05D006627 8.1e-06 54.3 41 65.9


User provided reference genes

Program Settings