Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D00262 Eucalyptus grandis HOM05D005980 ORTHO05D007618 0.0e+00 1082.4 549 100.0
GSVIVG01021555001 Vitis vinifera HOM05D005980 ORTHO05D007618 1.8e-227 792.7 532 77.1
PGR102G3344 Punica granatum HOM05D005980 ORTHO05D007618 3.8e-222 775.0 557 75.4
CiPaw.09G119300 Carya illinoinensis HOM05D005980 ORTHO05D007618 7.4e-218 760.8 553 71.8
MD10G1257800 Malus domestica HOM05D005980 ORTHO05D007618 2.2e-217 759.2 550 71.3
Dinv21517 Davidia involucrata HOM05D005980 ORTHO05D007618 8.2e-217 757.3 522 74.7
Thecc.06G143900 Theobroma cacao HOM05D005980 ORTHO05D007618 1.8e-216 756.1 526 75.1
Prupe.4G086000 Prunus persica HOM05D005980 ORTHO05D007618 1.5e-215 753.1 550 70.9
CSS0019737 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 1.7e-214 749.6 554 72.2
ClCG01G024920 Citrullus lanatus HOM05D005980 ORTHO05D007618 8.5e-214 747.3 552 69.7
Oeu032723.1 Olea europaea HOM05D005980 ORTHO05D007618 4.2e-213 745.0 555 70.8
CSS0007144 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 7.2e-213 744.2 554 71.8
Haze_05690 Corylus avellana HOM05D005980 ORTHO05D007618 1.0e-211 740.3 610 66.4
CsaV3_6G052070 Cucumis sativus L. HOM05D005980 ORTHO05D007618 8.8e-211 737.3 552 68.7
QL05p054997 Quercus lobata HOM05D005980 ORTHO05D007618 1.5e-210 736.5 552 70.7
Nn3g20318 Nelumbo nucifera HOM05D005980 ORTHO05D007618 2.6e-210 735.7 555 70.1
RcHm_v2.0_Chr5g0014971 Rosa chinensis HOM05D005980 ORTHO05D007618 1.3e-209 733.4 573 68.1
Ciclev10014878m.g Citrus clementina HOM05D005980 ORTHO05D007618 2.2e-209 732.6 555 71.0
Solyc02g070390.3 Solanum lycopersicum HOM05D005980 ORTHO05D007618 2.2e-209 732.6 556 69.6
Sopen02g019470 Solanum pennellii HOM05D005980 ORTHO05D007618 2.8e-209 732.3 556 69.6
TAR626G0855 Trochodendron aralioides HOM05D005980 ORTHO05D007618 2.8e-209 732.3 556 70.0
PGSC0003DMG402021097 Solanum tuberosum HOM05D005980 ORTHO05D007618 6.3e-209 731.1 559 69.4
FvH4_3g05000 Fragaria vesca HOM05D005980 ORTHO05D007618 1.8e-208 729.6 573 67.7
Gohir.D05G148400 Gossypium hirsutum HOM05D005980 ORTHO05D007618 7.0e-208 727.6 554 69.9
Actinidia13438 Actinidia chinensis HOM05D005980 ORTHO05D007618 3.5e-207 725.3 557 69.7
MSTRG.16268 Avicennia marina HOM05D005980 ORTHO05D007618 1.0e-206 723.8 558 68.3
MELO3C007103.2 Cucumis melo HOM05D005980 ORTHO05D007618 1.7e-206 723.0 573 66.5
Nitab4.5_0000869g0050 Nicotiana tabacum HOM05D005980 ORTHO05D007618 1.7e-206 723.0 559 69.4
COL.COLO4_31005 Corchorus olitorius HOM05D005980 ORTHO05D007618 1.9e-205 719.5 537 70.4
FAN11G3650 Fragaria x ananassa HOM05D005980 ORTHO05D007618 1.9e-205 719.5 580 66.7
Potri.001G358400 Populus trichocarpa HOM05D005980 ORTHO05D007618 1.9e-205 719.5 558 68.3
FAN16G3332 Fragaria x ananassa HOM05D005980 ORTHO05D007618 2.5e-205 719.2 540 70.0
FAN21G1725 Fragaria x ananassa HOM05D005980 ORTHO05D007618 3.2e-205 718.8 580 66.4
Sed0023515 Sechium edule HOM05D005980 ORTHO05D007618 7.2e-205 717.6 552 67.6
Sabra16G0236200 Salix brachista HOM05D005980 ORTHO05D007618 4.0e-203 711.8 570 67.5
DCAR_003883 Daucus carota HOM05D005980 ORTHO05D007618 1.3e-201 706.8 519 70.7
Peaxi162Scf00670g00346 Petunia axillaris HOM05D005980 ORTHO05D007618 2.4e-200 702.6 502 72.5
Aqoxy4G00005 Aquilegia oxysepala HOM05D005980 ORTHO05D007618 1.6e-199 699.9 529 70.3
Cc09_g08730 Coffea canephora HOM05D005980 ORTHO05D007618 2.0e-199 699.5 557 66.2
PSO675G5271 Papaver somniferum HOM05D005980 ORTHO05D007618 2.0e-199 699.5 557 68.0
Sed0012577 Sechium edule HOM05D005980 ORTHO05D007618 3.5e-199 698.7 552 66.3
Hma1.2p1_0586F.1_g183830 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 2.9e-198 695.7 489 73.0
PSO541G1780 Papaver somniferum HOM05D005980 ORTHO05D007618 2.9e-198 695.7 557 67.7
Dinv32210 Davidia involucrata HOM05D005980 ORTHO05D007618 1.1e-197 693.7 463 77.3
Gorai.009G152600 Gossypium raimondii HOM05D005980 ORTHO05D007618 1.9e-197 693.0 517 70.0
EL10Ac1g01827 Beta vulgaris HOM05D005980 ORTHO05D007618 2.5e-197 692.6 528 68.4
TWI73G1267 Tripterygium wilfordii HOM05D005980 ORTHO05D007618 2.5e-197 692.6 519 68.0
Migut.M01863 Erythranthe guttata HOM05D005980 ORTHO05D007618 2.3e-195 686.0 560 66.6
CANSAT35G0447 Cannabis sativa HOM05D005980 ORTHO05D007618 1.2e-194 683.7 564 65.8
Gohir.A05G146100 Gossypium hirsutum HOM05D005980 ORTHO05D007618 1.5e-194 683.3 554 66.4
Lj1A1168T68 Lonicera japonica HOM05D005980 ORTHO05D007618 1.5e-194 683.3 524 68.1
AUR62025366 Chenopodium quinoa HOM05D005980 ORTHO05D007618 1.4e-192 676.8 553 65.6
AUR62028384 Chenopodium quinoa HOM05D005980 ORTHO05D007618 1.8e-192 676.4 552 65.4
Lj6g0019056 Lotus japonicus HOM05D005980 ORTHO05D007618 1.8e-192 676.4 514 70.4
Nitab4.5_0005963g0020 Nicotiana tabacum HOM05D005980 ORTHO05D007618 3.5e-191 672.2 559 66.4
ATR1098G083 Amborella trichopoda HOM05D005980 ORTHO05D007618 2.3e-190 669.5 526 67.5
Manes.15G125300 Manihot esculenta HOM05D005980 ORTHO05D007618 1.1e-189 667.2 472 73.9
arahy.Tifrunner.gnm1.ann1.G1ZF0U Arachis hypogaea HOM05D005980 ORTHO05D007618 1.9e-189 666.4 535 66.9
arahy.Tifrunner.gnm1.ann1.PI6078 Arachis hypogaea HOM05D005980 ORTHO05D007618 1.2e-188 663.7 535 66.5
SGA_v2.0_scaffold51G18642 Striga asiatica HOM05D005980 ORTHO05D007618 1.2e-188 663.7 554 65.2
Rhsim13G0118300 Rhododendron simsii HOM05D005980 ORTHO05D007618 1.8e-187 659.8 559 64.8
THA.LOC104820671 Tarenaya hassleriana HOM05D005980 ORTHO05D007618 4.0e-187 658.7 567 64.0
Phvul.006G168100 Phaseolus vulgaris HOM05D005980 ORTHO05D007618 1.2e-186 657.1 495 68.7
Glyma.13G221300 Glycine max HOM05D005980 ORTHO05D007618 3.4e-186 655.6 504 68.3
SalBow8G1809 Salvia bowleyana HOM05D005980 ORTHO05D007618 7.5e-186 654.4 555 62.9
Aa31LG10G6710 Aethionema arabicum HOM05D005980 ORTHO05D007618 4.9e-185 651.7 540 63.1
Psat1g191560 Pisum sativum HOM05D005980 ORTHO05D007618 8.3e-185 651.0 531 65.0
A05p11020 Brassica napus HOM05D005980 ORTHO05D007618 1.1e-184 650.6 539 64.0
FAN25G0178 Fragaria x ananassa HOM05D005980 ORTHO05D007618 1.8e-184 649.8 602 60.6
BraA05t20047Z Brassica rapa HOM05D005980 ORTHO05D007618 2.4e-184 649.4 539 63.8
AT2G34640 Arabidopsis thaliana HOM05D005980 ORTHO05D007618 7.0e-184 647.9 565 62.5
BcaC02g11540 Brassica carinata HOM05D005980 ORTHO05D007618 2.0e-183 646.4 560 62.1
BolC4t23002H Brassica oleracea HOM05D005980 ORTHO05D007618 2.0e-183 646.4 560 62.1
VMungo0540G0170 Vigna mungo HOM05D005980 ORTHO05D007618 3.5e-183 645.6 503 67.8
C04p14140 Brassica napus HOM05D005980 ORTHO05D007618 4.5e-183 645.2 560 62.3
Carub.0004s1633 Capsella rubella HOM05D005980 ORTHO05D007618 5.9e-183 644.8 564 62.6
AL4G30630 Arabidopsis lyrata HOM05D005980 ORTHO05D007618 1.0e-182 644.0 566 61.3
CARHR128740 Cardamine hirsuta HOM05D005980 ORTHO05D007618 2.5e-181 639.4 567 60.8
Lalb_Chr18g0055171 Lupinus albus HOM05D005980 ORTHO05D007618 3.6e-180 635.6 535 62.2
Medtr2g018740 Medicago truncatula HOM05D005980 ORTHO05D007618 3.6e-180 635.6 540 62.4
HanXRQChr10g0301191 Helianthus annuus HOM05D005980 ORTHO05D007618 1.8e-179 633.3 548 62.0
TPR.G26225 Trifolium pratense HOM05D005980 ORTHO05D007618 8.9e-179 630.9 541 61.6
Thhalv10016502m.g Eutrema salsugineum HOM05D005980 ORTHO05D007618 4.4e-178 628.6 544 62.7
Lj2C323G3 Lonicera japonica HOM05D005980 ORTHO05D007618 4.9e-177 625.2 517 66.2
Sc05g0005970 Simmondsia chinensis HOM05D005980 ORTHO05D007618 4.9e-177 625.2 468 68.4
Ca_00513_v3 Cicer arietinum L. HOM05D005980 ORTHO05D007618 2.7e-175 619.4 472 68.6
Sp4g16910 Schrenkiella parvula HOM05D005980 ORTHO05D007618 8.6e-174 614.4 544 61.9
Lsat_1_v5_gn_9_33800 Lactuca sativa HOM05D005980 ORTHO05D007618 4.7e-172 608.6 529 62.2
unitig_578.g16128 Utricularia gibba HOM05D005980 ORTHO05D007618 4.0e-171 605.5 551 59.9
vmacro03427 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 1.1e-168 597.4 444 68.2
Ah.12g059810 Amaranthus hybridus HOM05D005980 ORTHO05D007618 1.6e-167 593.6 497 63.6
BcaNung07262 Brassica carinata HOM05D005980 ORTHO05D007618 4.9e-161 572.0 450 67.6
ECA247G3302 Erigeron canadensis HOM05D005980 ORTHO05D007618 1.5e-154 550.4 467 60.6
Os01g0769900 Oryza sativa ssp. japonica HOM05D005980 ORTHO05D007618 6.0e-151 538.5 580 53.3
Zm00001eb152010 Zea mays HOM05D005980 ORTHO05D007618 1.7e-150 537.0 579 53.0
MD05G1278700 Malus domestica HOM05D005980 ORTHO05D007618 7.2e-112 408.7 308 69.2
HPP92_001893 Vanilla planifolia HOM05D005980 ORTHO05D007618 8.2e-108 395.2 393 55.0
MBI02_g18932_MAGBIO Magnolia biondii HOM05D005980 ORTHO05D007618 2.2e-97 360.5 282 66.3
Hma1.2p1_0586F.1_g183820 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 1.5e-96 357.8 283 65.0
Cpa.g.sc17.57 Carica papaya HOM05D005980 ORTHO05D007618 3.6e-87 326.6 276 65.6
AagrBONN_evm.TU.Sc2ySwM_228.94 Anthoceros agrestis HOM05D005980 ORTHO05D007618 1.3e-84 318.2 510 39.8
CDE01G0059 Ceratophyllum demersum HOM05D005980 ORTHO05D007618 2.0e-82 310.8 287 58.5
Mapoly0061s0053 Marchantia polymorpha HOM05D005980 ORTHO05D007618 3.2e-80 303.5 426 41.1
Cpa.g.sc17.56 Carica papaya HOM05D005980 ORTHO05D007618 3.6e-79 300.1 160 87.5
Cpa.g.c47879 Carica papaya HOM05D005980 ORTHO05D007618 9.1e-75 285.4 209 72.7
Pp3c10_12300 Physcomitrium patens HOM05D005980 ORTHO05D007618 1.6e-66 258.1 395 38.5
Pp3c3_26950 Physcomitrium patens HOM05D005980 ORTHO05D007618 4.6e-66 256.5 515 33.8
SGA_v2.0_scaffold230G43391 Striga asiatica HOM05D005980 ORTHO05D007618 3.0e-57 227.3 125 80.8
arahy.Tifrunner.gnm1.ann1.D5DAI6 Arachis hypogaea HOM05D005980 ORTHO05D007618 1.1e-56 225.3 246 52.0
SGA_v2.0_scaffold6G03478 Striga asiatica HOM05D005980 ORTHO05D007618 2.1e-55 221.1 125 81.6
Hma1.2p1_0581F.1_g182930 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 8.9e-54 215.7 151 74.2
Lsat_1_v5_gn_1_94041 Lactuca sativa HOM05D005980 ORTHO05D007618 2.7e-50 204.1 140 67.9
HPP92_001892 Vanilla planifolia HOM05D005980 ORTHO05D007618 2.3e-49 201.1 171 63.2
CBR_g48045 Chara braunii HOM05D005980 ORTHO05D007618 4.1e-43 180.3 248 41.9
MD05G1278800 Malus domestica HOM05D005980 ORTHO05D007618 2.5e-32 144.4 80 80.0
SEGI_30301 Sequoiadendron giganteum HOM05D005980 ORTHO05D007618 4.8e-31 140.2 246 38.6
Cpa.g.sc17.55 Carica papaya HOM05D005980 ORTHO05D007618 9.0e-30 136.0 111 75.7
Glyma.15G091200 Glycine max HOM05D005980 ORTHO05D007618 4.6e-26 123.6 88 73.9
HanXRQChr10g0301121 Helianthus annuus HOM05D005980 ORTHO05D007618 1.6e-23 115.2 71 74.6
MBI02_g26594_MAGBIO Magnolia biondii HOM05D005980 ORTHO05D007618 6.4e-20 103.2 87 70.1
Haze_05663 Corylus avellana HOM05D005980 ORTHO05D007618 3.2e-19 100.9 114 57.9
arahy.Tifrunner.gnm1.ann1.MPA65D Arachis hypogaea HOM05D005980 ORTHO05D007618 7.9e-18 96.3 53 83.0
Actinidia33672 Actinidia chinensis HOM05D005980 ORTHO05D007618 2.8e-15 87.8 76 64.5
vmacro03428 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 2.8e-15 87.8 106 57.5
Lsat_1_v5_gn_1_94021 Lactuca sativa HOM05D005980 ORTHO05D007618 3.7e-15 87.4 140 47.1
MD05G1278900 Malus domestica HOM05D005980 ORTHO05D007618 3.7e-15 87.4 73 69.9
Lsat_1_v5_gn_7_71901 Lactuca sativa HOM05D002457 ORTHO05D005750 3.1e-14 84.3 93 47.3
Actinidia33673 Actinidia chinensis HOM05D005980 ORTHO05D007618 1.3e-12 79.0 188 37.8
MSTRG.16269 Avicennia marina HOM05D005980 ORTHO05D007618 1.3e-12 79.0 45 73.3
Cpa.g.c48158 Carica papaya HOM05D005980 ORTHO05D007618 6.7e-09 66.6 32 93.8


User provided reference genes

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