Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03660 Eucalyptus grandis HOM05D004763 ORTHO05D007492 2.9e-91 338.6 177 100.0
Eucgr.B03662 Eucalyptus grandis HOM05D004763 ORTHO05D007492 6.5e-91 337.4 177 99.4
Manes.14G014500 Manihot esculenta HOM05D004763 ORTHO05D007492 3.9e-75 285.0 175 82.9
CiPaw.14G125100 Carya illinoinensis HOM05D004763 ORTHO05D007492 2.3e-72 275.8 174 80.5
Haze_23044 Corylus avellana HOM05D004763 ORTHO05D007492 4.0e-72 275.0 173 80.3
COL.COLO4_09893 Corchorus olitorius HOM05D004763 ORTHO05D007492 5.8e-71 271.2 176 78.4
CSS0044360 Camellia sinensis var. sinensis HOM05D004763 ORTHO05D007492 7.5e-71 270.8 176 78.4
TAR623G1126 Trochodendron aralioides HOM05D004763 ORTHO05D007492 9.8e-71 270.4 176 78.4
Gohir.A13G215400 Gossypium hirsutum HOM05D004763 ORTHO05D007492 3.7e-70 268.5 173 80.3
QL01p006243 Quercus lobata HOM05D004763 ORTHO05D007492 3.7e-70 268.5 175 78.3
Gorai.013G250000 Gossypium raimondii HOM05D004763 ORTHO05D007492 4.9e-70 268.1 173 79.8
Gohir.D13G219100 Gossypium hirsutum HOM05D004763 ORTHO05D007492 1.1e-69 266.9 173 79.2
Dinv36304 Davidia involucrata HOM05D004763 ORTHO05D007492 1.9e-69 266.2 176 79.0
Thecc.09G223100 Theobroma cacao HOM05D004763 ORTHO05D007492 1.9e-69 266.2 176 78.4
GSVIVG01025336001 Vitis vinifera HOM05D004763 ORTHO05D007492 2.4e-69 265.8 176 77.3
Duzib150G1218 Durio zibethinus HOM05D004763 ORTHO05D007492 3.2e-69 265.4 173 78.6
TWI34G0672 Tripterygium wilfordii HOM05D004763 ORTHO05D007492 5.4e-69 264.6 177 75.1
Sabra03G0153800 Salix brachista HOM05D004763 ORTHO05D007492 9.2e-69 263.8 174 75.3
Sabra03G0156000 Salix brachista HOM05D004763 ORTHO05D007492 9.2e-69 263.8 174 75.3
Glyma.13G342900 Glycine max HOM05D004763 ORTHO05D007492 2.0e-68 262.7 177 76.3
VMungo1080G1755 Vigna mungo HOM05D004763 ORTHO05D007492 2.0e-68 262.7 173 78.6
Hma1.2p1_1169F.1_g263300 Hydrangea macrophylla HOM05D004763 ORTHO05D007492 2.7e-68 262.3 176 76.1
Hma1.2p1_1169F.1_g263310 Hydrangea macrophylla HOM05D004763 ORTHO05D007492 3.5e-68 261.9 174 77.0
Hund22081 Selenicereus undatus HOM05D004763 ORTHO05D007492 4.6e-68 261.5 176 73.9
THA.LOC104816912 Tarenaya hassleriana HOM05D004763 ORTHO05D007492 4.6e-68 261.5 174 76.4
Cpa.g.sc84.111 Carica papaya HOM05D004763 ORTHO05D007492 7.8e-68 260.8 174 77.6
Lju1319A4T15 Lonicera japonica HOM05D004763 ORTHO05D007492 1.0e-67 260.4 176 75.0
Potri.003G211000 Populus trichocarpa HOM05D004763 ORTHO05D007492 1.7e-67 259.6 174 74.7
CANSAT54G1729 Cannabis sativa HOM05D004763 ORTHO05D007492 2.3e-67 259.2 178 77.5
Peaxi162Scf00773g00119 Petunia axillaris HOM05D004763 ORTHO05D007492 2.3e-67 259.2 173 76.3
AUR62019250 Chenopodium quinoa HOM05D004763 ORTHO05D007492 3.9e-67 258.5 176 72.7
Phvul.005G150500 Phaseolus vulgaris HOM05D004763 ORTHO05D007492 8.6e-67 257.3 177 74.6
DCAR_024396 Daucus carota HOM05D004763 ORTHO05D007492 1.1e-66 256.9 176 73.3
Cc01_g04070 Coffea canephora HOM05D004763 ORTHO05D007492 1.5e-66 256.5 177 71.8
Lalb_Chr14g0372291 Lupinus albus HOM05D004763 ORTHO05D007492 3.3e-66 255.4 178 74.2
Carub.0003s2074 Capsella rubella HOM05D004763 ORTHO05D007492 5.6e-66 254.6 175 74.3
CARHR096610 Cardamine hirsuta HOM05D004763 ORTHO05D007492 5.6e-66 254.6 175 74.3
MELO3C014639.2 Cucumis melo HOM05D004763 ORTHO05D007492 7.3e-66 254.2 174 73.6
EL10Ac4g10318 Beta vulgaris HOM05D004763 ORTHO05D007492 1.2e-65 253.4 176 71.6
Ah.04g161760 Amaranthus hybridus HOM05D004763 ORTHO05D007492 1.6e-65 253.1 176 72.7
arahy.Tifrunner.gnm1.ann1.P0K6XU Arachis hypogaea HOM05D004763 ORTHO05D007492 1.6e-65 253.1 176 74.4
arahy.Tifrunner.gnm1.ann1.X75IXN Arachis hypogaea HOM05D004763 ORTHO05D007492 1.6e-65 253.1 179 72.6
Sc09g0000480 Simmondsia chinensis HOM05D004763 ORTHO05D007492 2.8e-65 252.3 177 72.9
CsaV3_4G023800 Cucumis sativus L. HOM05D004763 ORTHO05D007492 3.6e-65 251.9 174 74.1
Migut.D00558 Erythranthe guttata HOM05D004763 ORTHO05D007492 4.7e-65 251.5 176 71.6
PSO339G3791 Papaver somniferum HOM05D004763 ORTHO05D007492 8.0e-65 250.8 176 70.5
arahy.Tifrunner.gnm1.ann1.VYK1P0 Arachis hypogaea HOM05D004763 ORTHO05D007492 1.1e-64 250.4 179 72.1
AT3G20780 Arabidopsis thaliana HOM05D004763 ORTHO05D007492 1.4e-64 250.0 175 73.1
Sed0013957 Sechium edule HOM05D004763 ORTHO05D007492 1.8e-64 249.6 173 72.8
arahy.Tifrunner.gnm1.ann1.GN3GFY Arachis hypogaea HOM05D004763 ORTHO05D007492 3.1e-64 248.8 179 71.5
Nitab4.5_0003069g0050 Nicotiana tabacum HOM05D004763 ORTHO05D007492 3.1e-64 248.8 173 72.8
AL3G34700 Arabidopsis lyrata HOM05D004763 ORTHO05D007492 6.8e-64 247.7 175 72.6
Actinidia39377 Actinidia chinensis HOM05D004763 ORTHO05D007492 8.9e-64 247.3 177 73.4
ECA238G4453 Erigeron canadensis HOM05D004763 ORTHO05D007492 8.9e-64 247.3 178 70.8
HanXRQChr14g0451781 Helianthus annuus HOM05D004763 ORTHO05D007492 1.5e-63 246.5 178 70.2
A05p28000 Brassica napus HOM05D004763 ORTHO05D007492 2.6e-63 245.7 175 71.4
CAN.G442.1 Capsicum annuum HOM05D004763 ORTHO05D007492 2.6e-63 245.7 173 72.3
C05p43300 Brassica napus HOM05D004763 ORTHO05D007492 3.4e-63 245.4 175 71.4
Nn7g36058 Nelumbo nucifera HOM05D004763 ORTHO05D007492 3.4e-63 245.4 174 71.3
Sp3g18800 Schrenkiella parvula HOM05D004763 ORTHO05D007492 3.4e-63 245.4 175 70.9
Thhalv10020214m.g Eutrema salsugineum HOM05D004763 ORTHO05D007492 4.4e-63 245.0 175 71.4
Medtr2g098510 Medicago truncatula HOM05D004763 ORTHO05D007492 5.8e-63 244.6 177 70.6
BcaB06g26148 Brassica carinata HOM05D004763 ORTHO05D007492 9.8e-63 243.8 175 71.4
BcaC05g28282 Brassica carinata HOM05D004763 ORTHO05D007492 9.8e-63 243.8 175 70.9
BolC5t33062H Brassica oleracea HOM05D004763 ORTHO05D007492 1.3e-62 243.4 175 70.9
BraA05t21683Z Brassica rapa HOM05D004763 ORTHO05D007492 1.7e-62 243.0 175 70.9
Ciclev10014511m.g Citrus clementina HOM05D004763 ORTHO05D007492 2.2e-62 242.7 176 72.2
Actinidia06319 Actinidia chinensis HOM05D004763 ORTHO05D007492 2.9e-62 242.3 177 71.8
Aqoxy1G00185 Aquilegia oxysepala HOM05D004763 ORTHO05D007492 8.3e-62 240.7 175 69.1
Sopen01g009200 Solanum pennellii HOM05D004763 ORTHO05D007492 1.4e-61 240.0 173 69.4
Psat5g288480 Pisum sativum HOM05D004763 ORTHO05D007492 4.1e-61 238.4 177 68.9
Solyc01g014490.4 Solanum lycopersicum HOM05D004763 ORTHO05D007492 5.4e-61 238.0 172 69.2
PGSC0003DMG402029907 Solanum tuberosum HOM05D004763 ORTHO05D007492 5.4e-61 238.0 174 70.7
SGA_v2.0_scaffold1G00797 Striga asiatica HOM05D004763 ORTHO05D007492 2.7e-60 235.7 176 68.8
Lsat_1_v5_gn_2_101121 Lactuca sativa HOM05D004763 ORTHO05D007492 4.6e-60 235.0 183 68.3
Atru.chr3.2503 Acer truncatum HOM05D004763 ORTHO05D007492 1.0e-59 233.8 176 68.8
FvH4_3g43550 Fragaria vesca HOM05D004763 ORTHO05D007492 1.3e-59 233.4 174 69.5
FAN11G0713 Fragaria x ananassa HOM05D004763 ORTHO05D007492 3.0e-59 232.3 174 69.0
FAN11G2145 Fragaria x ananassa HOM05D004763 ORTHO05D007492 3.0e-59 232.3 174 69.0
Nitab4.5_0006575g0020 Nicotiana tabacum HOM05D004763 ORTHO05D007492 5.1e-59 231.5 196 64.3
FAN16G3272 Fragaria x ananassa HOM05D004763 ORTHO05D007492 8.6e-59 230.7 174 69.0
RcHm_v2.0_Chr5g0078101 Rosa chinensis HOM05D004763 ORTHO05D007492 8.6e-59 230.7 174 69.0
Lj3g0020649 Lotus japonicus HOM05D004763 ORTHO05D007492 4.3e-58 228.4 177 66.7
Lj4g0010878 Lotus japonicus HOM05D004763 ORTHO05D007492 5.6e-58 228.0 177 66.7
Prupe.6G018600 Prunus persica HOM05D004763 ORTHO05D007492 1.2e-57 226.9 192 66.1
PGR102G0325 Punica granatum HOM05D004763 ORTHO05D007492 1.2e-57 226.9 174 69.5
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 2.1e-57 226.1 164 70.7
HPP92_020536 Vanilla planifolia HOM05D004763 ORTHO05D007492 2.1e-57 226.1 175 63.4
MD03G1021100 Malus domestica HOM05D004763 ORTHO05D007492 1.1e-56 223.8 182 68.7
Os09g0279600 Oryza sativa ssp. japonica HOM05D004763 ORTHO05D007492 2.0e-55 219.5 174 62.6
CDE04G0998 Ceratophyllum demersum HOM05D004763 ORTHO05D007492 3.4e-55 218.8 173 67.1
SEGI_39045 Sequoiadendron giganteum HOM05D004763 ORTHO05D007492 5.8e-55 218.0 176 63.6
Zm00001eb308780 Zea mays HOM05D004763 ORTHO05D007492 5.8e-55 218.0 176 61.4
Ca_01270_v3 Cicer arietinum L. HOM05D004763 ORTHO05D007492 9.9e-55 217.2 177 65.5
ATR0605G091 Amborella trichopoda HOM05D004763 ORTHO05D007492 4.9e-54 214.9 173 61.8
FAN21G2003 Fragaria x ananassa HOM05D004763 ORTHO05D007492 2.1e-52 209.5 148 73.0
Rhsim01G0189300 Rhododendron simsii HOM05D004763 ORTHO05D007492 2.3e-51 206.1 176 63.6
Pp3c22_12720 Physcomitrium patens HOM05D004763 ORTHO05D007492 8.6e-51 204.1 174 61.5
AagrBONN_evm.TU.Sc2ySwM_344.3405 Anthoceros agrestis HOM05D004763 ORTHO05D007492 7.6e-47 191.0 175 57.1
CBR_g31022 Chara braunii HOM05D004763 ORTHO05D007492 1.3e-46 190.3 177 55.4
Aa31LG8G7590 Aethionema arabicum HOM05D004763 ORTHO05D007492 2.2e-46 189.5 128 75.0
Mapoly0042s0060 Marchantia polymorpha HOM05D004763 ORTHO05D007492 2.2e-46 189.5 156 60.3
Lj1C366G5 Lonicera japonica HOM05D004763 ORTHO05D007492 1.0e-43 180.6 176 57.4
SMO116G0144 Selaginella moellendorffii HOM05D004763 ORTHO05D007492 7.3e-42 174.5 176 50.0
TPR.G29743 Trifolium pratense HOM05D004763 ORTHO05D007492 7.3e-42 174.5 159 61.6
Aqoxy381s001 Aquilegia oxysepala HOM05D004763 ORTHO05D007492 6.9e-40 167.9 171 56.1
Cre01.g019750 Chlamydomonas reinhardtii HOM05D004763 ORTHO05D007492 1.5e-31 140.2 179 43.6
PRCOL_00005940 Prasinoderma coloniale HOM05D004763 ORTHO05D007492 4.6e-28 128.6 149 47.7
MCO09G243 Micromonas commoda HOM05D004763 ORTHO05D007492 3.8e-22 109.0 162 43.2
Lsat_1_v5_gn_1_127121 Lactuca sativa HOM05D004763 ORTHO05D007492 2.2e-14 83.2 128 39.8
Lsat_1_v5_gn_1_126941 Lactuca sativa HOM05D004763 ORTHO05D007492 3.8e-14 82.4 55 70.9
Potri.T085401 Populus trichocarpa HOM05D004763 ORTHO05D007492 1.3e-11 73.9 37 94.6
Lsat_1_v5_gn_1_127001 Lactuca sativa HOM05D004763 ORTHO05D007492 4.3e-10 68.9 38 84.2
Aa31LG8G7540 Aethionema arabicum HOM05D004763 ORTHO05D007492 4.1e-08 62.4 68 50.0
Lsat_1_v5_gn_1_127161 Lactuca sativa HOM05D004763 ORTHO05D007492 3.8e-06 55.8 77 45.5


User provided reference genes

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