Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B02158 Eucalyptus grandis HOM05D000780 ORTHO05D008187 4.3e-107 391.3 201 100.0
PGR142G2101 Punica granatum HOM05D000780 ORTHO05D008187 6.5e-87 324.3 197 81.7
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 8.5e-87 323.9 193 82.4
TAR365G0867 Trochodendron aralioides HOM05D000780 ORTHO05D008187 1.1e-86 323.6 200 80.5
Ciclev10022342m.g Citrus clementina HOM05D000780 ORTHO05D008187 3.2e-86 322.0 197 81.7
CiPaw.07G077300 Carya illinoinensis HOM05D000780 ORTHO05D008187 4.2e-86 321.6 191 82.2
Manes.08G142200 Manihot esculenta HOM05D000780 ORTHO05D008187 5.5e-86 321.2 204 80.4
Atru.chr2.1118 Acer truncatum HOM05D000780 ORTHO05D008187 1.2e-85 320.1 197 82.7
Hma1.2p1_0123F.1_g058210 Hydrangea macrophylla HOM05D000780 ORTHO05D008187 4.7e-85 318.2 203 78.8
Lj5g0021253 Lotus japonicus HOM05D000780 ORTHO05D008187 4.7e-85 318.2 195 81.0
CSS0012715 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D008187 1.0e-84 317.0 202 79.7
CSS0043062 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D008187 1.0e-84 317.0 202 79.7
Potri.013G050400 Populus trichocarpa HOM05D000780 ORTHO05D008187 1.0e-84 317.0 200 80.5
Thecc.05G266200 Theobroma cacao HOM05D000780 ORTHO05D008187 3.0e-84 315.5 194 80.9
Nn1g03034 Nelumbo nucifera HOM05D000780 ORTHO05D008187 3.9e-84 315.1 194 82.0
HanXRQChr15g0491391 Helianthus annuus HOM05D000780 ORTHO05D008187 1.5e-83 313.2 196 78.6
arahy.Tifrunner.gnm1.ann1.A1PM7K Arachis hypogaea HOM05D000780 ORTHO05D008187 2.0e-83 312.8 201 77.6
GSVIVG01026325001 Vitis vinifera HOM05D000780 ORTHO05D008187 2.6e-83 312.4 199 79.4
Gohir.D13G172100 Gossypium hirsutum HOM05D000780 ORTHO05D008187 7.4e-83 310.8 193 79.8
VMungo0720G3181 Vigna mungo HOM05D000780 ORTHO05D008187 7.4e-83 310.8 198 78.8
Gohir.A13G161900 Gossypium hirsutum HOM05D000780 ORTHO05D008187 2.2e-82 309.3 193 79.3
Prupe.6G352700 Prunus persica HOM05D000780 ORTHO05D008187 2.2e-82 309.3 194 79.4
vmacro19977 Vaccinium macrocarpon HOM05D000780 ORTHO05D008187 2.2e-82 309.3 202 78.7
arahy.Tifrunner.gnm1.ann1.22BZB2 Arachis hypogaea HOM05D000780 ORTHO05D008187 6.3e-82 307.8 201 76.1
Actinidia06829 Actinidia chinensis HOM05D000780 ORTHO05D008187 1.4e-81 306.6 195 79.0
Cfa006318 Carpinus fangiana HOM05D000780 ORTHO05D008187 1.4e-81 306.6 194 79.9
Glyma.10G167500 Glycine max HOM05D000780 ORTHO05D008187 1.4e-81 306.6 198 79.8
Phvul.L001832 Phaseolus vulgaris HOM05D000780 ORTHO05D008187 1.8e-81 306.2 198 78.3
THA.LOC104821579 Tarenaya hassleriana HOM05D000780 ORTHO05D008187 2.4e-81 305.8 194 77.8
Lsat_1_v5_gn_9_45901 Lactuca sativa HOM05D000780 ORTHO05D008187 7.0e-81 304.3 197 78.7
Cc09_g03050 Coffea canephora HOM05D000780 ORTHO05D008187 1.2e-80 303.5 194 78.4
Migut.F02051 Erythranthe guttata HOM05D000780 ORTHO05D008187 1.2e-80 303.5 194 76.8
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 1.6e-80 303.1 202 76.7
Nitab4.5_0003148g0010 Nicotiana tabacum HOM05D000780 ORTHO05D008187 3.5e-80 302.0 198 76.3
ECA232G3805 Erigeron canadensis HOM05D000780 ORTHO05D008187 4.5e-80 301.6 202 75.7
Nitab4.5_0000841g0110 Nicotiana tabacum HOM05D000780 ORTHO05D008187 5.9e-80 301.2 198 75.8
FvH4_6g01510 Fragaria vesca HOM05D000780 ORTHO05D008187 7.7e-80 300.8 191 78.0
Aqoxy5G00096 Aquilegia oxysepala HOM05D000780 ORTHO05D008187 1.7e-79 299.7 201 72.6
Peaxi162Scf00077g00146 Petunia axillaris HOM05D000780 ORTHO05D008187 3.8e-79 298.5 192 77.6
QL03p032337 Quercus lobata HOM05D000780 ORTHO05D008187 3.8e-79 298.5 256 62.5
RcHm_v2.0_Chr3g0449181 Rosa chinensis HOM05D000780 ORTHO05D008187 5.0e-79 298.1 191 77.5
TPR.G10275 Trifolium pratense HOM05D000780 ORTHO05D008187 6.5e-79 297.7 191 77.0
MD12G1250600 Malus domestica HOM05D000780 ORTHO05D008187 1.1e-78 297.0 195 78.5
QL01p042023 Quercus lobata HOM05D000780 ORTHO05D008187 1.1e-78 297.0 245 64.5
SalBow1G0848 Salvia bowleyana HOM05D000780 ORTHO05D008187 1.1e-78 297.0 192 77.6
FAN05G1554 Fragaria x ananassa HOM05D003786 ORTHO05D008187 1.5e-78 296.6 187 78.1
FAN05G3511 Fragaria x ananassa HOM05D003786 ORTHO05D008187 1.5e-78 296.6 187 78.1
MSTRG.9218 Avicennia marina HOM05D000780 ORTHO05D008187 2.5e-78 295.8 194 76.8
CANSAT54G1591 Cannabis sativa HOM05D000780 ORTHO05D008187 2.5e-78 295.8 195 74.9
FAN14G4371 Fragaria x ananassa HOM05D003786 ORTHO05D008187 3.2e-78 295.4 187 77.5
PGSC0003DMG400028708 Solanum tuberosum HOM05D000780 ORTHO05D008187 4.2e-78 295.0 191 77.0
Solyc04g050480.4 Solanum lycopersicum HOM05D000780 ORTHO05D008187 7.2e-78 294.3 191 78.0
CDE08G0869 Ceratophyllum demersum HOM05D000780 ORTHO05D008187 9.4e-78 293.9 190 75.8
Sopen04g021260 Solanum pennellii HOM05D000780 ORTHO05D008187 9.4e-78 293.9 191 77.5
Lalb_Chr06g0168371 Lupinus albus HOM05D000780 ORTHO05D008187 1.2e-77 293.5 195 75.4
Gorai.013G188600 Gossypium raimondii HOM05D000780 ORTHO05D008187 1.6e-77 293.1 220 70.0
MELO3C026663.2 Cucumis melo HOM05D000780 ORTHO05D008187 2.1e-77 292.7 195 74.9
BraA07t30934Z Brassica rapa HOM05D000780 ORTHO05D008187 3.6e-77 292.0 188 77.1
A07p33060 Brassica napus HOM05D000780 ORTHO05D008187 4.7e-77 291.6 188 77.1
Carub.0007s3696 Capsella rubella HOM05D000780 ORTHO05D008187 4.7e-77 291.6 191 77.0
CsaV3_3G029860 Cucumis sativus L. HOM05D000780 ORTHO05D008187 6.1e-77 291.2 195 74.9
C06p39320 Brassica napus HOM05D000780 ORTHO05D008187 8.0e-77 290.8 189 76.7
BolC6t39025H Brassica oleracea HOM05D000780 ORTHO05D008187 8.0e-77 290.8 189 76.7
Lj2A46T71 Lonicera japonica HOM05D000780 ORTHO05D008187 8.0e-77 290.8 186 79.6
Medtr1g079767 Medicago truncatula HOM05D000780 ORTHO05D008187 8.0e-77 290.8 193 72.5
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 8.0e-77 290.8 181 79.6
CAN.G1311.4 Capsicum annuum HOM05D000780 ORTHO05D008187 1.0e-76 290.4 189 76.2
CARHR263660 Cardamine hirsuta HOM05D000780 ORTHO05D008187 1.4e-76 290.0 191 77.5
Sp5g21080 Schrenkiella parvula HOM05D000780 ORTHO05D008187 1.4e-76 290.0 189 77.2
AL7G51540 Arabidopsis lyrata HOM05D000780 ORTHO05D008187 4.0e-76 288.5 191 76.4
BcaB01g01289 Brassica carinata HOM05D000780 ORTHO05D008187 4.0e-76 288.5 189 77.2
BcaC08g46086 Brassica carinata HOM05D000780 ORTHO05D008187 4.0e-76 288.5 188 76.6
Sed0008093 Sechium edule HOM05D000780 ORTHO05D008187 4.0e-76 288.5 195 75.9
Thhalv10019185m.g Eutrema salsugineum HOM05D000780 ORTHO05D008187 8.8e-76 287.3 189 76.7
HPP92_012831 Vanilla planifolia HOM05D000780 ORTHO05D008187 2.0e-75 286.2 194 73.2
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 4.4e-75 285.0 195 74.4
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 5.7e-75 284.6 179 77.7
Hund21757 Selenicereus undatus HOM05D000780 ORTHO05D008187 2.2e-74 282.7 200 71.5
AUR62006990 Chenopodium quinoa HOM05D000780 ORTHO05D008187 2.8e-74 282.3 198 72.7
AT5G38890 Arabidopsis thaliana HOM05D000780 ORTHO05D008187 8.2e-74 280.8 190 74.7
EL10Ac4g09772 Beta vulgaris HOM05D000780 ORTHO05D008187 1.1e-73 280.4 199 70.4
PSO832G2551 Papaver somniferum HOM05D000780 ORTHO05D008187 4.1e-73 278.5 203 70.9
Aa31LG2G2020 Aethionema arabicum HOM05D000780 ORTHO05D008187 2.0e-72 276.2 187 75.9
Sc08g0004580 Simmondsia chinensis HOM05D000780 ORTHO05D008187 2.7e-72 275.8 212 69.3
PSO674G0050 Papaver somniferum HOM05D000780 ORTHO05D008187 1.7e-71 273.1 203 70.0
Os02g0815800 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D008187 8.8e-68 260.8 188 71.8
SEGI_35156 Sequoiadendron giganteum HOM05D000780 ORTHO05D008187 4.4e-67 258.5 185 69.2
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 7.5e-67 257.7 163 78.5
BcaB03g15301 Brassica carinata HOM05D000780 ORTHO05D008187 1.0e-63 247.3 160 76.9
Mapoly0063s0053 Marchantia polymorpha HOM05D000780 ORTHO05D008187 2.9e-63 245.7 190 66.8
SMO172G0199 Selaginella moellendorffii HOM05D000780 ORTHO05D008187 1.6e-61 240.0 194 63.4
Pp3c22_21010 Physcomitrium patens HOM05D000780 ORTHO05D008187 4.0e-60 235.3 189 66.7
CDE07G0101 Ceratophyllum demersum HOM05D000780 ORTHO05D008187 1.2e-59 233.8 147 78.2
SalBow1G5753 Salvia bowleyana HOM05D000780 ORTHO05D008187 2.0e-59 233.0 165 73.3
SalBow1G8050 Salvia bowleyana HOM05D000780 ORTHO05D008187 2.6e-59 232.6 192 64.6
SGA_v2.0_scaffold62G21470 Striga asiatica HOM05D000780 ORTHO05D008187 1.4e-57 226.9 193 62.7
Dinv06003 Davidia involucrata HOM05D000780 ORTHO05D008187 1.2e-56 223.8 145 76.6
FAN14G4130 Fragaria x ananassa HOM05D003786 ORTHO05D004375 1.7e-55 219.9 187 64.7
TWI60G0996 Tripterygium wilfordii HOM05D000780 ORTHO05D008187 1.3e-50 203.8 141 75.2
Ah.06g187920 Amaranthus hybridus HOM05D000780 ORTHO05D008187 2.4e-49 199.5 254 50.8
Glyma.20G221600 Glycine max HOM05D000780 ORTHO05D008187 7.8e-48 194.5 117 84.6
ATR0724G057 Amborella trichopoda HOM05D000780 ORTHO05D008187 1.7e-47 193.4 107 88.8
DCAR_005521 Daucus carota HOM05D000780 ORTHO05D008187 1.7e-47 193.4 107 88.8
Psat6g127280 Pisum sativum HOM05D000780 ORTHO05D008187 1.9e-46 189.9 141 69.5
SEGI_30710 Sequoiadendron giganteum HOM05D000780 ORTHO05D008187 3.3e-46 189.1 113 82.3
Zm00001eb258800 Zea mays HOM05D000780 ORTHO05D008187 5.2e-44 181.8 139 66.9
Dinv18279 Davidia involucrata HOM05D000780 ORTHO05D008187 6.0e-40 168.3 123 68.3
Cre07.g312750 Chlamydomonas reinhardtii HOM05D000780 ORTHO05D008187 3.9e-39 165.6 186 50.5
MCO11G401 Micromonas commoda HOM05D000780 ORTHO05D008187 9.5e-38 161.0 197 49.7
QL01p042037 Quercus lobata HOM05D000780 ORTHO05D008187 8.1e-37 157.9 85 89.4
Thecc.07G153800 Theobroma cacao HOM05D000780 ORTHO05D008187 3.1e-36 156.0 105 76.2
Haze_04451 Corylus avellana HOM05D000780 ORTHO05D008187 2.6e-35 152.9 138 60.9
ClCG03G011510 Citrullus lanatus HOM05D000780 ORTHO05D008187 2.9e-34 149.4 110 67.3
AagrBONN_evm.TU.Sc2ySwM_228.3966 Anthoceros agrestis HOM05D000780 ORTHO05D008187 6.0e-32 141.7 138 56.5
MD04G1233000 Malus domestica HOM05D000780 ORTHO05D008187 9.9e-27 124.4 140 56.4
PRCOL_00002874 Prasinoderma coloniale HOM05D000780 ORTHO05D008187 2.3e-23 113.2 165 44.8
Cfa025943 Carpinus fangiana HOM05D000780 ORTHO05D008187 1.5e-22 110.5 197 37.1
Dinv06000 Davidia involucrata HOM05D000780 ORTHO05D008187 1.9e-22 110.2 62 85.5
SalBow1G3250 Salvia bowleyana HOM05D000780 ORTHO05D008187 2.2e-18 96.7 79 59.5
SalBow1G5540 Salvia bowleyana HOM05D000780 ORTHO05D008187 3.0e-15 86.3 80 55.0
SalBow1G1556 Salvia bowleyana HOM05D000111 ORTHO05D013786 3.1e-12 76.3 109 44.0
Cpa.g.c42374 Carica papaya HOM05D000780 ORTHO05D008187 3.4e-11 72.8 50 66.0
Psat7g095160 Pisum sativum HOM05D000780 ORTHO05D008187 1.6e-08 63.9 51 58.8
SalBow1G6941 Salvia bowleyana HOM05D000780 ORTHO05D008187 5.1e-07 58.9 52 50.0


User provided reference genes

Program Settings