Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10As1g23037 Beta vulgaris HOM05D005507 ORTHO05D007316 8.0e-174 613.6 301 100.0
AUR62038110 Chenopodium quinoa HOM05D005507 ORTHO05D007316 2.6e-103 379.4 290 68.6
AUR62025794 Chenopodium quinoa HOM05D005507 ORTHO05D007316 1.3e-102 377.1 304 66.8
CSS0025531 Camellia sinensis var. sinensis HOM05D005507 ORTHO05D007316 2.8e-73 279.6 293 54.3
Hma1.2p1_0936F.1_g238770 Hydrangea macrophylla HOM05D005507 ORTHO05D007316 1.2e-71 274.2 291 54.0
Ah.08g210340 Amaranthus hybridus HOM05D005507 ORTHO05D007316 4.4e-71 272.3 156 84.0
Thecc.05G038400 Theobroma cacao HOM05D005507 ORTHO05D007316 1.7e-70 270.4 291 51.9
Ciclev10011102m.g Citrus clementina HOM05D005507 ORTHO05D007316 1.8e-69 266.9 291 51.9
QL07p048577 Quercus lobata HOM05D005507 ORTHO05D007316 1.8e-69 266.9 307 51.1
Gorai.006G172300 Gossypium raimondii HOM05D005507 ORTHO05D007316 1.6e-68 263.8 291 51.2
CiPaw.09G193400 Carya illinoinensis HOM05D005507 ORTHO05D007316 2.0e-68 263.5 289 51.9
Gohir.D09G151000 Gossypium hirsutum HOM05D005507 ORTHO05D007316 2.7e-68 263.1 291 51.2
Actinidia11260 Actinidia chinensis HOM05D005507 ORTHO05D007316 3.5e-68 262.7 290 51.0
MD04G1129900 Malus domestica HOM05D005507 ORTHO05D007316 3.5e-68 262.7 291 52.2
Haze_20804 Corylus avellana HOM05D005507 ORTHO05D007316 1.3e-67 260.8 297 51.2
Atru.chr8.1984 Acer truncatum HOM05D005507 ORTHO05D007316 2.3e-67 260.0 290 51.4
Hund10642 Selenicereus undatus HOM05D005507 ORTHO05D007316 2.3e-67 260.0 158 76.6
Cfa017367 Carpinus fangiana HOM05D005507 ORTHO05D007316 3.8e-67 259.2 289 51.6
THA.LOC104816267 Tarenaya hassleriana HOM05D005507 ORTHO05D007316 3.8e-67 259.2 303 49.5
Gohir.A09G155500 Gossypium hirsutum HOM05D005507 ORTHO05D007316 5.0e-67 258.8 291 50.2
Dinv37165 Davidia involucrata HOM05D005507 ORTHO05D007316 8.6e-67 258.1 180 70.6
TAR633G0577 Trochodendron aralioides HOM05D005507 ORTHO05D007316 1.1e-66 257.7 288 50.7
Nn2g11133 Nelumbo nucifera HOM05D005507 ORTHO05D007316 1.5e-66 257.3 291 51.9
Oeu024341.2 Olea europaea HOM05D005507 ORTHO05D007316 1.5e-66 257.3 301 49.5
Manes.08G080700 Manihot esculenta HOM05D005507 ORTHO05D007316 2.5e-66 256.5 291 50.5
Potri.006G086200 Populus trichocarpa HOM05D005507 ORTHO05D007316 2.5e-66 256.5 295 51.9
TAR623G0024 Trochodendron aralioides HOM05D005507 ORTHO05D007316 1.2e-65 254.2 289 50.9
vmacro20162 Vaccinium macrocarpon HOM05D005507 ORTHO05D007316 1.2e-65 254.2 293 49.1
ClCG04G008130 Citrullus lanatus HOM05D005507 ORTHO05D007316 1.6e-65 253.8 300 48.3
Lj2A93G83 Lonicera japonica HOM05D005507 ORTHO05D007316 2.1e-65 253.4 292 50.3
MBI14_g36928_MAGBIO Magnolia biondii HOM05D005507 ORTHO05D007316 2.8e-65 253.1 295 51.9
MD12G1143000 Malus domestica HOM05D005507 ORTHO05D007316 2.8e-65 253.1 292 51.4
Thhalv10012718m.g Eutrema salsugineum HOM05D005507 ORTHO05D007316 3.6e-65 252.7 298 50.7
Cpa.g.sc188.6 Carica papaya HOM05D005507 ORTHO05D007316 4.7e-65 252.3 160 72.5
PGR004G0811 Punica granatum HOM05D005507 ORTHO05D007316 6.1e-65 251.9 293 48.8
BraA10t45368Z Brassica rapa HOM05D005507 ORTHO05D007316 1.0e-64 251.1 294 49.7
Cc06_g02560 Coffea canephora HOM05D005507 ORTHO05D007316 1.0e-64 251.1 289 48.8
CARHR211120 Cardamine hirsuta HOM05D005507 ORTHO05D007316 3.0e-64 249.6 299 48.8
Sp6g40200 Schrenkiella parvula HOM05D005507 ORTHO05D007316 4.0e-64 249.2 299 49.8
Aa31LG1G22500 Aethionema arabicum HOM05D005507 ORTHO05D007316 6.8e-64 248.4 297 48.5
A10p33370 Brassica napus HOM05D005507 ORTHO05D007316 6.8e-64 248.4 294 49.3
C09p74280 Brassica napus HOM05D005507 ORTHO05D007316 6.8e-64 248.4 295 49.2
BolC9t60161H Brassica oleracea HOM05D005507 ORTHO05D007316 6.8e-64 248.4 295 49.2
AT5G02250 Arabidopsis thaliana HOM05D005507 ORTHO05D007316 1.2e-63 247.7 296 49.3
Rhsim05G0193600 Rhododendron simsii HOM05D005507 ORTHO05D007316 1.2e-63 247.7 293 48.1
Carub.0006s0109 Capsella rubella HOM05D005507 ORTHO05D007316 1.5e-63 247.3 299 48.8
FAN14G4006 Fragaria x ananassa HOM05D005507 ORTHO05D007316 3.4e-63 246.1 293 50.5
Lj3g0017176 Lotus japonicus HOM05D005507 ORTHO05D007316 3.4e-63 246.1 289 47.1
AL6G11510 Arabidopsis lyrata HOM05D005507 ORTHO05D007316 5.8e-63 245.4 296 49.0
FAN09G0180 Fragaria x ananassa HOM05D005507 ORTHO05D007316 5.8e-63 245.4 285 49.8
FvH4_6g13600 Fragaria vesca HOM05D005507 ORTHO05D007316 1.7e-62 243.8 293 50.2
Eucgr.A01270 Eucalyptus grandis HOM05D005507 ORTHO05D007316 2.9e-62 243.0 221 55.7
CANSAT35G1404 Cannabis sativa HOM05D005507 ORTHO05D007316 4.9e-62 242.3 291 47.1
Sabra06G0065800 Salix brachista HOM05D005507 ORTHO05D007316 4.9e-62 242.3 295 49.5
SalBow3G2672 Salvia bowleyana HOM05D005507 ORTHO05D007316 1.1e-61 241.1 220 57.3
CsaV3_4G025060 Cucumis sativus L. HOM05D005507 ORTHO05D007316 1.4e-61 240.7 291 47.8
ATR0559G008 Amborella trichopoda HOM05D005507 ORTHO05D007316 4.1e-61 239.2 220 56.4
Sed0014596 Sechium edule HOM05D005507 ORTHO05D007316 4.1e-61 239.2 163 68.1
Sopen09g005610 Solanum pennellii HOM05D005507 ORTHO05D007316 5.4e-61 238.8 162 71.0
SGA_v2.0_scaffold75G24953 Striga asiatica HOM05D005507 ORTHO05D007316 7.0e-61 238.4 290 46.6
PSO339G2235 Papaver somniferum HOM05D005507 ORTHO05D007316 1.2e-60 237.7 300 47.7
Solyc09g010870.4 Solanum lycopersicum HOM05D005507 ORTHO05D007316 2.0e-60 236.9 162 71.0
GSVIVG01034161001 Vitis vinifera HOM05D005507 ORTHO05D007316 3.5e-60 236.1 160 71.2
Lalb_Chr12g0209571 Lupinus albus HOM05D005507 ORTHO05D007316 4.6e-60 235.7 158 69.6
HanXRQChr04g0125471 Helianthus annuus HOM05D005507 ORTHO05D007316 6.0e-60 235.3 287 48.4
MSTRG.19080 Avicennia marina HOM05D005507 ORTHO05D007316 1.3e-59 234.2 163 70.6
CDE04G1833 Ceratophyllum demersum HOM05D005507 ORTHO05D007316 1.3e-59 234.2 294 46.6
PSO151G0160 Papaver somniferum HOM05D005507 ORTHO05D007316 1.3e-59 234.2 222 55.4
MELO3C003135.2 Cucumis melo HOM05D005507 ORTHO05D007316 3.0e-59 233.0 163 67.5
Glyma.18G153300 Glycine max HOM05D005507 ORTHO05D007316 3.0e-59 233.0 290 46.6
Aqoxy2G02218 Aquilegia oxysepala HOM05D005507 ORTHO05D007316 5.0e-59 232.3 159 67.9
VMungo0331G0190 Vigna mungo HOM05D005507 ORTHO05D007316 5.0e-59 232.3 258 49.6
CAN.G499.3 Capsicum annuum HOM05D005507 ORTHO05D007316 8.6e-59 231.5 162 68.5
Lsat_1_v5_gn_8_85360 Lactuca sativa HOM05D005507 ORTHO05D007316 1.5e-58 230.7 291 48.5
PGSC0003DMG400008832 Solanum tuberosum HOM05D005507 ORTHO05D007316 1.9e-58 230.3 162 68.5
FAN02G3281 Fragaria x ananassa HOM05D005507 ORTHO05D007316 2.5e-58 229.9 328 43.9
TWI53G1275 Tripterygium wilfordii HOM05D005507 ORTHO05D007316 3.3e-58 229.6 291 48.8
Migut.J00324 Erythranthe guttata HOM05D005507 ORTHO05D007316 7.3e-58 228.4 291 45.7
arahy.Tifrunner.gnm1.ann1.CQ4D9K Arachis hypogaea HOM05D005507 ORTHO05D007316 1.6e-57 227.3 158 66.5
Medtr4g021750 Medicago truncatula HOM05D005507 ORTHO05D007316 8.0e-57 224.9 289 45.7
Phvul.010G010050 Phaseolus vulgaris HOM05D005507 ORTHO05D007316 1.4e-56 224.2 158 67.7
arahy.Tifrunner.gnm1.ann1.128L9Z Arachis hypogaea HOM05D005507 ORTHO05D007316 1.8e-56 223.8 158 65.8
CDE07G0172 Ceratophyllum demersum HOM05D005507 ORTHO05D007316 2.3e-56 223.4 145 73.1
Ca_19991_v3 Cicer arietinum L. HOM05D005507 ORTHO05D007316 2.3e-56 223.4 166 65.1
DCAR_028747 Daucus carota HOM05D005507 ORTHO05D007316 1.5e-55 220.7 295 45.8
ECA236G2467 Erigeron canadensis HOM05D005507 ORTHO05D007316 2.0e-55 220.3 160 64.4
TPR.G5632 Trifolium pratense HOM05D005507 ORTHO05D007316 1.7e-54 217.2 185 58.9
HPP92_018140 Vanilla planifolia HOM05D005507 ORTHO05D007316 2.9e-54 216.5 163 62.6
Os01g0841800 Oryza sativa ssp. japonica HOM05D005507 ORTHO05D007316 3.0e-51 206.5 243 47.7
Lj3C966G5 Lonicera japonica HOM05D005507 ORTHO05D007316 1.5e-50 204.1 163 65.0
Zm00001eb148300 Zea mays HOM05D005507 ORTHO05D007316 3.6e-49 199.5 221 48.9
RcHm_v2.0_Chr3g0466451 Rosa chinensis HOM05D005507 ORTHO05D007316 8.1e-49 198.4 296 45.9
Nitab4.5_0000705g0210 Nicotiana tabacum HOM05D005507 ORTHO05D007316 1.3e-46 191.0 220 48.2
Nitab4.5_0011443g0010 Nicotiana tabacum HOM05D005507 ORTHO05D007316 4.9e-46 189.1 162 58.6
Sc07g0007070 Simmondsia chinensis HOM05D005507 ORTHO05D007316 3.9e-43 179.5 116 71.6
Peaxi162Scf00165g01015 Petunia axillaris HOM05D005507 ORTHO05D007316 2.8e-41 173.3 162 56.2
unitig_578.g15691 Utricularia gibba HOM05D005507 ORTHO05D007316 9.9e-39 164.9 118 67.8
Lalb_Chr07g0193881 Lupinus albus HOM05D005507 ORTHO05D007316 1.7e-38 164.1 110 69.1
Pp3c14_20610 Physcomitrium patens HOM05D005507 ORTHO05D007316 1.6e-33 147.5 144 50.7
Ca_19986_v3 Cicer arietinum L. HOM05D005507 ORTHO05D007316 2.1e-33 147.1 113 61.1
AagrBONN_evm.TU.Sc2ySwM_362.2750 Anthoceros agrestis HOM05D005507 ORTHO05D007316 4.0e-32 142.9 160 43.8
Mapoly0006s0179 Marchantia polymorpha HOM05D005507 ORTHO05D007316 1.5e-31 141.0 145 46.2
COL.COLO4_14788 Corchorus olitorius HOM05D005507 ORTHO05D007316 2.4e-29 133.7 262 37.0
Psat5g035720 Pisum sativum HOM05D005507 ORTHO05D007316 3.6e-25 119.8 85 65.9
Prupe.6G256600 Prunus persica HOM05D005507 ORTHO05D007316 1.5e-23 114.4 81 61.7
SMO119G0389 Selaginella moellendorffii HOM05D005507 ORTHO05D007316 8.4e-22 108.6 142 38.7
CBR_g72631 Chara braunii HOM05D005507 ORTHO05D007316 1.9e-21 107.5 144 40.3
Psat7g235360 Pisum sativum HOM05D005507 ORTHO05D007316 4.6e-20 102.8 73 65.8
PSO170G4202 Papaver somniferum HOM05D005507 ORTHO05D007316 3.1e-16 90.1 69 58.0
Cre12.g500650 Chlamydomonas reinhardtii HOM05D005507 ORTHO05D007316 1.2e-12 78.2 126 33.3
SGA_v2.0_scaffold268G46231 Striga asiatica HOM05D005507 ORTHO05D399677 4.6e-12 76.3 91 48.4
Ca_27727_v3 Cicer arietinum L. HOM05D005507 ORTHO05D025048 1.3e-11 74.7 94 46.8
Psat6g176160 Pisum sativum HOM05D005507 ORTHO05D007316 1.6e-09 67.8 49 61.2
Psat0s9259g0040 Pisum sativum HOM05D005507 ORTHO05D007316 1.5e-07 61.2 81 39.5
Lalb_Chr07g0193871 Lupinus albus HOM05D005507 ORTHO05D025048 4.5e-07 59.7 48 54.2


User provided reference genes

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