Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac9g20660 Beta vulgaris HOM05D004852 ORTHO05D006128 2.6e-83 312.0 154 100.0
EL10Ac9g22261 Beta vulgaris HOM05D004852 ORTHO05D006128 4.0e-52 208.4 190 62.6
AUR62010324 Chenopodium quinoa HOM05D004852 ORTHO05D006128 1.4e-44 183.3 165 61.2
EL10Ac4g08553 Beta vulgaris HOM05D004852 ORTHO05D006128 4.9e-42 174.9 178 58.4
AUR62039064 Chenopodium quinoa HOM05D004852 ORTHO05D006128 1.3e-39 166.8 190 52.1
Ah.01g018340 Amaranthus hybridus HOM05D004852 ORTHO05D006128 3.2e-33 145.6 192 48.4
Hund06310 Selenicereus undatus HOM05D004852 ORTHO05D006128 2.5e-30 136.0 203 45.3
Sc18g0005570 Simmondsia chinensis HOM05D004852 ORTHO05D006128 7.3e-30 134.4 200 44.5
COL.COLO4_32578 Corchorus olitorius HOM05D004852 ORTHO05D006128 9.6e-30 134.0 173 48.6
Lj5A215G62 Lonicera japonica HOM05D004852 ORTHO05D006128 1.8e-28 129.8 195 43.6
Manes.07G069666 Manihot esculenta HOM05D004852 ORTHO05D006128 1.8e-28 129.8 171 46.2
CSS0042044 Camellia sinensis var. sinensis HOM05D004852 ORTHO05D006128 8.9e-28 127.5 198 44.4
Ciclev10027730m.g Citrus clementina HOM05D004852 ORTHO05D006128 1.2e-27 127.1 174 45.4
QL11p033063 Quercus lobata HOM05D004852 ORTHO05D006128 4.4e-27 125.2 210 37.6
Dinv42201 Davidia involucrata HOM05D004852 ORTHO05D006128 5.8e-27 124.8 216 41.2
FvH4_2g04972 Fragaria vesca HOM05D004852 ORTHO05D006128 5.8e-27 124.8 211 42.7
GSVIVG01037905001 Vitis vinifera HOM05D004852 ORTHO05D006128 9.9e-27 124.0 211 39.8
HanXRQChr17g0570571 Helianthus annuus HOM05D004852 ORTHO05D006128 1.3e-26 123.6 193 42.0
Gohir.A13G044100 Gossypium hirsutum HOM05D004852 ORTHO05D006128 1.7e-26 123.2 209 41.1
Gohir.D13G043200 Gossypium hirsutum HOM05D004852 ORTHO05D006128 1.7e-26 123.2 209 39.7
Gorai.013G047900 Gossypium raimondii HOM05D004852 ORTHO05D006128 1.7e-26 123.2 209 39.7
CiPaw.05G012900 Carya illinoinensis HOM05D004852 ORTHO05D006128 2.2e-26 122.9 210 41.4
MD10G1098400 Malus domestica HOM05D004852 ORTHO05D006128 2.9e-26 122.5 214 41.6
RcHm_v2.0_Chr6g0254741 Rosa chinensis HOM05D004852 ORTHO05D006128 6.4e-26 121.3 212 42.0
TWI79G0830 Tripterygium wilfordii HOM05D004852 ORTHO05D006128 6.4e-26 121.3 208 39.9
Actinidia05501 Actinidia chinensis HOM05D004852 ORTHO05D006128 1.1e-25 120.6 200 38.5
Peaxi162Scf00016g02441 Petunia axillaris HOM05D004852 ORTHO05D006128 1.1e-25 120.6 206 38.8
FAN15G1156 Fragaria x ananassa HOM05D004852 ORTHO05D006128 1.4e-25 120.2 211 39.3
Thecc.02G110100 Theobroma cacao HOM05D004852 ORTHO05D006128 1.4e-25 120.2 210 40.5
PSO541G3304 Papaver somniferum HOM05D004852 ORTHO05D006128 1.9e-25 119.8 195 39.5
Migut.N01158 Erythranthe guttata HOM05D004852 ORTHO05D006128 3.2e-25 119.0 176 43.2
SGA_v2.0_scaffold106G30732 Striga asiatica HOM05D004852 ORTHO05D006128 3.2e-25 119.0 187 39.6
Lsat_1_v5_gn_7_85781 Lactuca sativa HOM05D004852 ORTHO05D006128 4.2e-25 118.6 182 41.8
Atru.chr3.2810 Acer truncatum HOM05D004852 ORTHO05D006128 5.4e-25 118.2 210 39.0
Atru.chr5.2475 Acer truncatum HOM05D004852 ORTHO05D006128 5.4e-25 118.2 210 39.0
CsaV3_7G008100 Cucumis sativus L. HOM05D004852 ORTHO05D006128 7.1e-25 117.9 208 39.4
MELO3C005497.2 Cucumis melo HOM05D004852 ORTHO05D006128 1.6e-24 116.7 208 38.9
PGR142G1976 Punica granatum HOM05D004852 ORTHO05D006128 1.6e-24 116.7 207 39.6
Glyma.01G243900 Glycine max HOM05D004852 ORTHO05D006128 2.1e-24 116.3 202 39.6
Prupe.8G136700 Prunus persica HOM05D004852 ORTHO05D006128 2.1e-24 116.3 220 37.7
Duzib205G0175 Durio zibethinus HOM05D004852 ORTHO05D006128 2.7e-24 115.9 210 40.0
Aqoxy6G02842 Aquilegia oxysepala HOM05D004852 ORTHO05D006128 1.3e-23 113.6 205 37.1
ECA236G4936 Erigeron canadensis HOM05D004852 ORTHO05D006128 3.0e-23 112.5 191 39.3
Medtr5g004960 Medicago truncatula HOM05D004852 ORTHO05D006128 3.0e-23 112.5 201 39.3
SalBow3G4263 Salvia bowleyana HOM05D004852 ORTHO05D006128 3.0e-23 112.5 205 38.5
Potri.009G094400 Populus trichocarpa HOM05D004852 ORTHO05D006128 3.9e-23 112.1 205 39.0
Phvul.002G053200 Phaseolus vulgaris HOM05D004852 ORTHO05D006128 6.6e-23 111.3 202 39.1
Cc02_g19340 Coffea canephora HOM05D004852 ORTHO05D006128 1.1e-22 110.5 199 38.7
arahy.Tifrunner.gnm1.ann1.9X93LG Arachis hypogaea HOM05D004852 ORTHO05D006128 1.5e-22 110.2 204 38.2
CAN.G606.8 Capsicum annuum HOM05D004852 ORTHO05D006128 1.5e-22 110.2 211 37.0
AT5G44750 Arabidopsis thaliana HOM05D004852 ORTHO05D006128 1.9e-22 109.8 199 38.7
arahy.Tifrunner.gnm1.ann1.F6JX6R Arachis hypogaea HOM05D004852 ORTHO05D006128 1.9e-22 109.8 204 38.2
Ca_24346_v3 Cicer arietinum L. HOM05D004852 ORTHO05D006128 1.9e-22 109.8 202 37.1
Nn1g04670 Nelumbo nucifera HOM05D004852 ORTHO05D006128 1.9e-22 109.8 201 37.8
Oeu044275.2 Olea europaea HOM05D004852 ORTHO05D006128 3.3e-22 109.0 205 36.6
Sopen01g049730 Solanum pennellii HOM05D004852 ORTHO05D006128 3.3e-22 109.0 202 38.1
Eucgr.I01096 Eucalyptus grandis HOM05D004852 ORTHO05D006128 7.3e-22 107.8 211 36.5
Sp2g09590 Schrenkiella parvula HOM05D004852 ORTHO05D006128 7.3e-22 107.8 199 36.7
Solyc01g107510.3 Solanum lycopersicum HOM05D004852 ORTHO05D006128 7.3e-22 107.8 202 38.1
CARHR178150 Cardamine hirsuta HOM05D004852 ORTHO05D006128 1.3e-21 107.1 199 36.2
ClCG02G006490 Citrullus lanatus HOM05D004852 ORTHO05D006128 1.3e-21 107.1 206 37.4
Lj1g0003104 Lotus japonicus HOM05D004852 ORTHO05D006128 1.3e-21 107.1 193 37.8
BolC7t43304H Brassica oleracea HOM05D004852 ORTHO05D006128 2.8e-21 105.9 196 37.8
BcaNung06822 Brassica carinata HOM05D004852 ORTHO05D006128 3.6e-21 105.5 199 36.7
A06p46930 Brassica napus HOM05D004852 ORTHO05D006128 3.6e-21 105.5 201 36.3
Carub.0008s0351 Capsella rubella HOM05D004852 ORTHO05D006128 3.6e-21 105.5 199 36.2
AL8G14780 Arabidopsis lyrata HOM05D004852 ORTHO05D006128 4.8e-21 105.1 199 36.2
Sed0001586 Sechium edule HOM05D004852 ORTHO05D006128 4.8e-21 105.1 208 37.0
BraA06t27566Z Brassica rapa HOM05D004852 ORTHO05D006128 8.1e-21 104.4 196 36.7
Thhalv10000766m.g Eutrema salsugineum HOM05D004852 ORTHO05D006128 8.1e-21 104.4 194 36.6
THA.LOC104812918 Tarenaya hassleriana HOM05D004852 ORTHO05D006128 8.1e-21 104.4 202 37.1
C07p27720 Brassica napus HOM05D004852 ORTHO05D006128 1.1e-20 104.0 201 35.3
DCAR_029088 Daucus carota HOM05D004852 ORTHO05D006128 1.1e-20 104.0 204 35.3
Psat4g228520 Pisum sativum HOM05D004852 ORTHO05D006128 1.1e-20 104.0 200 37.0
Aa31LG9G8420 Aethionema arabicum HOM05D004852 ORTHO05D006128 1.4e-20 103.6 197 36.5
TPR.G21613 Trifolium pratense HOM05D004852 ORTHO05D006128 5.3e-20 101.7 202 36.1
TAR376G0480 Trochodendron aralioides HOM05D004852 ORTHO05D006128 5.3e-20 101.7 109 51.4
Sabra09G0072700 Salix brachista HOM05D004852 ORTHO05D006128 1.5e-19 100.1 109 51.4
Zm00001eb226110 Zea mays HOM05D004852 ORTHO05D006128 2.0e-19 99.8 199 35.2
unitig_26.g10234 Utricularia gibba HOM05D004852 ORTHO05D006128 4.4e-19 98.6 155 41.9
Lalb_Chr09g0319581 Lupinus albus HOM05D004852 ORTHO05D006128 8.4e-18 94.4 110 48.2
vmacro19454 Vaccinium macrocarpon HOM05D004852 ORTHO05D006128 3.5e-16 89.0 296 29.4
ATR0205G027 Amborella trichopoda HOM05D004852 ORTHO05D006128 4.6e-16 88.6 215 29.8
Os06g0691000 Oryza sativa ssp. japonica HOM05D004852 ORTHO05D006128 4.6e-16 88.6 208 31.7
Cpa.g.sc106.106 Carica papaya HOM05D004852 ORTHO05D006128 1.7e-15 86.7 49 79.6
Hma1.2p1_2341F.1_g320330 Hydrangea macrophylla HOM05D004852 ORTHO05D006128 1.7e-15 86.7 104 46.2
CANSAT25G3392 Cannabis sativa HOM05D004852 ORTHO05D006128 3.9e-15 85.5 52 76.9
MBI16_g23720_MAGBIO Magnolia biondii HOM05D004852 ORTHO05D006128 7.3e-14 81.3 52 71.2
SMO235G0070 Selaginella moellendorffii HOM05D004852 ORTHO05D006128 2.1e-13 79.7 166 31.9
SalBow1G3042 Salvia bowleyana HOM05D002275 ORTHO05D006235 5.3e-12 75.1 49 67.3
HPP92_017010 Vanilla planifolia HOM05D004852 ORTHO05D006128 7.6e-11 71.2 102 39.2
HPP92_017090 Vanilla planifolia HOM05D004852 ORTHO05D006128 9.9e-11 70.9 177 29.9
CDE01G0038 Ceratophyllum demersum HOM05D004852 ORTHO05D006128 1.9e-09 66.6 103 35.0
Rhsim05G0088800 Rhododendron simsii HOM05D004852 ORTHO05D006128 4.2e-09 65.5 159 34.0
Nitab4.5_0004326g0020 Nicotiana tabacum HOM05D004852 ORTHO05D006128 2.1e-08 63.2 177 29.9
Pp3c22_4740 Physcomitrium patens HOM05D004852 ORTHO05D006128 2.1e-08 63.2 136 34.6
AagrBONN_evm.TU.Sc2ySwM_228.1916 Anthoceros agrestis HOM05D004852 ORTHO05D006128 2.7e-08 62.8 98 36.7
Nitab4.5_0001143g0010 Nicotiana tabacum HOM05D004852 ORTHO05D006128 6.0e-08 61.6 185 30.8
Rhsim05G0088900 Rhododendron simsii HOM05D004852 ORTHO05D006128 1.3e-07 60.5 72 50.0
CBR_g29916 Chara braunii HOM05D004852 ORTHO05D000048 1.8e-07 60.1 149 32.9
Mapoly0216s0004 Marchantia polymorpha HOM05D004852 ORTHO05D006128 1.8e-07 60.1 103 37.9
SEGI_12594 Sequoiadendron giganteum HOM05D004852 ORTHO05D006128 8.7e-07 57.8 45 60.0
HPP92_016994 Vanilla planifolia HOM05D004852 ORTHO05D006128 1.1e-06 57.4 176 26.1


User provided reference genes

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