Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac8g20269 Beta vulgaris HOM05D006551 ORTHO05D008546 4.1e-173 611.3 306 100.0
Ah.14g087400 Amaranthus hybridus HOM05D006551 ORTHO05D008546 2.3e-99 366.3 268 67.2
AUR62021809 Chenopodium quinoa HOM05D006551 ORTHO05D008546 1.4e-93 347.1 232 72.0
Sc17g0008010 Simmondsia chinensis HOM05D006551 ORTHO05D008546 2.4e-93 346.3 224 71.9
Sopen04g007100 Solanum pennellii HOM05D006551 ORTHO05D008546 8.7e-91 337.8 259 65.6
PGSC0003DMG400015008 Solanum tuberosum HOM05D006551 ORTHO05D008546 2.5e-90 336.3 259 65.6
Manes.09G083300 Manihot esculenta HOM05D006551 ORTHO05D008546 5.6e-90 335.1 222 69.4
Cfa000032 Carpinus fangiana HOM05D006551 ORTHO05D008546 1.6e-89 333.6 230 68.7
Prupe.4G003400 Prunus persica HOM05D006551 ORTHO05D008546 6.2e-89 331.6 237 67.1
QL05p067740 Quercus lobata HOM05D006551 ORTHO05D008546 1.8e-88 330.1 223 70.0
Thecc.06G241400 Theobroma cacao HOM05D006551 ORTHO05D008546 9.0e-88 327.8 224 70.1
Duzib160G0007 Durio zibethinus HOM05D006551 ORTHO05D008546 1.5e-87 327.0 227 69.6
RcHm_v2.0_Chr5g0000451 Rosa chinensis HOM05D006551 ORTHO05D008546 1.5e-87 327.0 225 67.6
TWI38G1730 Tripterygium wilfordii HOM05D006551 ORTHO05D008546 1.5e-87 327.0 224 69.6
Dinv15335 Davidia involucrata HOM05D006551 ORTHO05D008546 2.0e-87 326.6 223 69.5
Medtr2g027110 Medicago truncatula HOM05D006551 ORTHO05D008546 2.0e-87 326.6 233 67.0
CiPaw.10G082200 Carya illinoinensis HOM05D006551 ORTHO05D008546 3.4e-87 325.9 223 69.5
Lalb_Chr20g0119561 Lupinus albus HOM05D006551 ORTHO05D008546 5.8e-87 325.1 234 66.7
Ciclev10016440m.g Citrus clementina HOM05D006551 ORTHO05D008546 9.9e-87 324.3 223 68.2
FvH4_3g00300 Fragaria vesca HOM05D006551 ORTHO05D008546 1.3e-86 323.9 224 68.8
CSS0008489 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 2.2e-86 323.2 224 68.8
CSS0047745 Camellia sinensis var. sinensis HOM05D006551 ORTHO05D008546 4.9e-86 322.0 224 68.8
Potri.006G004500 Populus trichocarpa HOM05D006551 ORTHO05D008546 6.4e-86 321.6 238 65.1
Aa31LG2G12400 Aethionema arabicum HOM05D006551 ORTHO05D008546 8.4e-86 321.2 224 68.3
Sabra06G0003800 Salix brachista HOM05D006551 ORTHO05D008546 5.4e-85 318.5 238 64.7
Lj6g0027493 Lotus japonicus HOM05D006551 ORTHO05D008546 9.3e-85 317.8 224 67.9
MSTRG.7126 Avicennia marina HOM05D006551 ORTHO05D008546 1.6e-84 317.0 224 67.0
Ca_00765_v3 Cicer arietinum L. HOM05D006551 ORTHO05D008546 1.6e-84 317.0 231 65.8
THA.LOC104815473 Tarenaya hassleriana HOM05D006551 ORTHO05D008546 2.7e-84 316.2 227 65.6
Hund08692 Selenicereus undatus HOM05D006551 ORTHO05D008546 4.6e-84 315.5 239 64.4
Phvul.006G137400 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 6.0e-84 315.1 235 64.7
TPR.G17557 Trifolium pratense HOM05D006551 ORTHO05D008546 6.0e-84 315.1 234 64.1
TAR629G1611 Trochodendron aralioides HOM05D006551 ORTHO05D008546 6.0e-84 315.1 224 66.1
Glyma.09G014800 Glycine max HOM05D006551 ORTHO05D008546 2.3e-83 313.2 224 66.1
Phvul.006G137611 Phaseolus vulgaris HOM05D006551 ORTHO05D008546 2.3e-83 313.2 235 64.7
A09p57680 Brassica napus HOM05D006551 ORTHO05D008546 3.0e-83 312.8 224 67.0
Migut.M01446 Erythranthe guttata HOM05D006551 ORTHO05D008546 3.0e-83 312.8 223 64.1
Atru.chr1.1073 Acer truncatum HOM05D006551 ORTHO05D008546 3.9e-83 312.4 229 64.6
CAN.G1263.6 Capsicum annuum HOM05D006551 ORTHO05D008546 5.1e-83 312.0 210 68.6
BraA09t41161Z Brassica rapa HOM05D006551 ORTHO05D008546 6.6e-83 311.6 224 67.0
Aqoxy1G04265 Aquilegia oxysepala HOM05D006551 ORTHO05D008546 8.7e-83 311.2 230 62.6
Gorai.011G008500 Gossypium raimondii HOM05D006551 ORTHO05D008546 1.5e-82 310.5 223 66.8
Nitab4.5_0000147g0330 Nicotiana tabacum HOM05D006551 ORTHO05D008546 1.5e-82 310.5 212 67.9
BcaC07g41084 Brassica carinata HOM05D006551 ORTHO05D008546 1.9e-82 310.1 224 67.0
BcaC07g41085 Brassica carinata HOM05D006551 ORTHO05D008546 1.9e-82 310.1 224 67.0
C08p40880 Brassica napus HOM05D006551 ORTHO05D008546 1.9e-82 310.1 224 67.0
BolC8t51654H Brassica oleracea HOM05D006551 ORTHO05D008546 1.9e-82 310.1 224 67.0
Gohir.A10G007900 Gossypium hirsutum HOM05D006551 ORTHO05D008546 1.9e-82 310.1 234 65.4
Gohir.D10G007800 Gossypium hirsutum HOM05D006551 ORTHO05D008546 2.5e-82 309.7 223 66.4
Peaxi162Scf00811g00222 Petunia axillaris HOM05D006551 ORTHO05D008546 2.5e-82 309.7 220 66.4
MD10G1339500 Malus domestica HOM05D006551 ORTHO05D008546 3.3e-82 309.3 229 63.3
Cc09_g00290 Coffea canephora HOM05D006551 ORTHO05D008546 4.3e-82 308.9 226 63.7
COL.COLO4_31943 Corchorus olitorius HOM05D000879 ORTHO05D002864 4.3e-82 308.9 226 65.0
Eucgr.L00150 Eucalyptus grandis HOM05D006551 ORTHO05D008546 4.3e-82 308.9 211 68.7
arahy.Tifrunner.gnm1.ann1.TFI8LM Arachis hypogaea HOM05D006551 ORTHO05D008546 5.6e-82 308.5 231 64.5
Eucgr.E03850 Eucalyptus grandis HOM05D006551 ORTHO05D008546 2.1e-81 306.6 236 61.4
SalBow8G1397 Salvia bowleyana HOM05D006551 ORTHO05D008546 2.1e-81 306.6 235 61.7
SalBow8G2449 Salvia bowleyana HOM05D006551 ORTHO05D008546 2.1e-81 306.6 235 61.7
arahy.Tifrunner.gnm1.ann1.HFV92P Arachis hypogaea HOM05D006551 ORTHO05D008546 2.8e-81 306.2 231 64.1
AL4G11740 Arabidopsis lyrata HOM05D006551 ORTHO05D008546 8.1e-81 304.7 224 64.7
Carub.0004s0140 Capsella rubella HOM05D006551 ORTHO05D008546 1.4e-80 303.9 224 64.7
AT2G22260 Arabidopsis thaliana HOM05D006551 ORTHO05D008546 1.8e-80 303.5 233 63.1
VMungo0540G0952 Vigna mungo HOM05D006551 ORTHO05D008546 2.4e-80 303.1 235 62.1
Hma1.2p1_1175F.1_g264070 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 1.5e-79 300.4 228 62.3
PGR042G3561 Punica granatum HOM05D006551 ORTHO05D008546 3.8e-78 295.8 222 62.2
Cpa.g.sc27.224 Carica papaya HOM05D006551 ORTHO05D008546 1.4e-77 293.9 223 62.8
Lsat_1_v5_gn_7_12961 Lactuca sativa HOM05D006551 ORTHO05D008546 2.4e-77 293.1 229 60.7
DCAR_002245 Daucus carota HOM05D006551 ORTHO05D008546 5.4e-77 292.0 224 61.6
CARHR113490 Cardamine hirsuta HOM05D006551 ORTHO05D008546 7.1e-77 291.6 224 62.5
SGA_v2.0_scaffold7G03692 Striga asiatica HOM05D006551 ORTHO05D008546 9.3e-77 291.2 209 65.6
PSO210G1263 Papaver somniferum HOM05D006551 ORTHO05D008546 1.2e-76 290.8 232 59.5
HanXRQChr05g0129031 Helianthus annuus HOM05D006551 ORTHO05D008546 1.6e-76 290.4 222 60.8
Lj1C1247T0 Lonicera japonica HOM05D006551 ORTHO05D008546 1.6e-76 290.4 254 58.7
HPP92_018202 Vanilla planifolia HOM05D006551 ORTHO05D008546 2.1e-76 290.0 224 63.8
ECA248G0604 Erigeron canadensis HOM05D006551 ORTHO05D008546 2.7e-76 289.7 223 61.4
PSO210G0886 Papaver somniferum HOM05D006551 ORTHO05D008546 3.5e-76 289.3 232 58.6
MELO3C008006.2 Cucumis melo HOM05D006551 ORTHO05D008546 6.0e-76 288.5 223 61.9
ClCG01G021210 Citrullus lanatus HOM05D006551 ORTHO05D008546 1.0e-75 287.7 223 61.0
unitig_37.g12177 Utricularia gibba HOM05D006551 ORTHO05D008546 1.1e-74 284.3 244 58.2
Nitab4.5_0006294g0080 Nicotiana tabacum HOM05D006551 ORTHO05D008546 2.5e-74 283.1 212 64.6
Sed0011139 Sechium edule HOM05D006551 ORTHO05D008546 7.4e-74 281.6 222 60.8
CsaV3_6G048230 Cucumis sativus L. HOM05D006551 ORTHO05D008546 1.3e-73 280.8 223 60.1
Zm00001eb380830 Zea mays HOM05D006551 ORTHO05D008546 2.4e-72 276.6 222 61.7
AUR62012856 Chenopodium quinoa HOM05D006551 ORTHO05D008546 2.6e-71 273.1 176 75.6
Oeu025969.1 Olea europaea HOM05D006551 ORTHO05D008546 1.4e-69 267.3 203 63.1
Psat1g172360 Pisum sativum HOM05D006551 ORTHO05D008546 8.7e-67 258.1 178 71.9
BcaB08g35054 Brassica carinata HOM05D006551 ORTHO05D008546 1.1e-66 257.7 195 63.6
Haze_07021 Corylus avellana HOM05D006551 ORTHO05D008546 2.8e-65 253.1 226 57.1
vmacro03605 Vaccinium macrocarpon HOM05D006551 ORTHO05D008546 2.4e-64 250.0 176 71.6
Solyc04g015080.4 Solanum lycopersicum HOM05D006551 ORTHO05D008546 3.1e-64 249.6 149 73.2
PGR004G0828 Punica granatum HOM05D006551 ORTHO05D008546 1.2e-63 247.7 157 69.4
Hma1.2p1_1175F.1_g264060 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 2.6e-63 246.5 149 71.8
SpUn1059_0010 Schrenkiella parvula HOM05D006551 ORTHO05D008546 1.3e-62 244.2 176 69.3
Nn1g07524 Nelumbo nucifera HOM05D006551 ORTHO05D008546 1.7e-62 243.8 146 71.2
Eucgr.E03848 Eucalyptus grandis HOM05D006551 ORTHO05D008546 2.8e-57 226.5 162 61.1
ATR0751G145 Amborella trichopoda HOM05D006551 ORTHO05D008546 1.8e-56 223.8 174 62.6
AagrBONN_evm.TU.Sc2ySwM_362.1805 Anthoceros agrestis HOM05D006551 ORTHO05D008546 1.5e-55 220.7 290 41.0
Rhsim13G0140300 Rhododendron simsii HOM05D006551 ORTHO05D008546 8.5e-54 214.9 147 65.3
AagrBONN_evm.TU.Sc2ySwM_369.541 Anthoceros agrestis HOM05D006551 ORTHO05D008546 1.9e-45 187.2 247 41.7
SEGI_23146 Sequoiadendron giganteum HOM05D006551 ORTHO05D008546 7.2e-45 185.3 225 45.3
Peaxi162Scf00827g00057 Petunia axillaris HOM05D006551 ORTHO05D008546 9.4e-45 184.9 170 57.1
SHI31451 Sapria himalayana HOM05D006551 ORTHO05D008546 3.3e-34 149.8 123 63.4
CBR_g3891 Chara braunii HOM05D006551 ORTHO05D008546 2.0e-31 140.6 159 42.8
SHI31456 Sapria himalayana HOM05D006551 ORTHO05D008546 4.5e-31 139.4 105 58.1
Glyma.15G120500 Glycine max HOM05D006551 ORTHO05D008546 1.9e-29 134.0 120 62.5
Psat2g019160 Pisum sativum HOM05D006551 ORTHO05D008546 7.2e-29 132.1 87 60.9
Sed0010073 Sechium edule HOM05D006551 ORTHO05D008546 2.6e-26 123.6 194 37.1
VMungo0540G1474 Vigna mungo HOM05D006551 ORTHO05D008546 1.8e-16 90.9 64 73.4
Hma1.2p1_1322F.1_g275500 Hydrangea macrophylla HOM05D006551 ORTHO05D008546 4.1e-16 89.7 74 66.2
Cfa024106 Carpinus fangiana HOM05D006551 ORTHO05D008546 1.6e-12 77.8 139 37.4
Pp3c2_11520 Physcomitrium patens HOM05D006551 ORTHO05D008546 6.1e-12 75.9 147 33.3
Sp4g01310 Schrenkiella parvula HOM05D006551 ORTHO05D008546 3.0e-11 73.6 48 56.2
Solyc12g056880.2 Solanum lycopersicum HOM05D006551 ORTHO05D008546 8.9e-11 72.0 38 76.3
Os06g0286310 Oryza sativa ssp. japonica HOM05D006551 ORTHO05D008546 1.3e-09 68.2 47 61.7
HanXRQChr17g0567191 Helianthus annuus HOM05D000289 ORTHO05D000208 4.9e-09 66.2 48 58.3
VMungo0540G1416 Vigna mungo HOM05D000555 ORTHO05D001906 4.1e-08 63.2 59 44.1
PRCOL_00002494 Prasinoderma coloniale HOM05D006551 ORTHO05D008546 7.0e-08 62.4 126 33.3
PRCOL_00003886 Prasinoderma coloniale HOM05D006551 ORTHO05D044110 9.2e-08 62.0 187 27.3


User provided reference genes

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