Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g12721 Beta vulgaris HOM05D000228 ORTHO05D013010 4.3e-59 231.1 116 100.0
AUR62017301 Chenopodium quinoa HOM05D000228 ORTHO05D006129 5.2e-28 127.9 71 87.3
AUR62010662 Chenopodium quinoa HOM05D000228 ORTHO05D006129 8.8e-28 127.1 71 85.9
Ah.12g057750 Amaranthus hybridus HOM05D000228 ORTHO05D006129 1.6e-24 116.3 69 76.8
Hund11530 Selenicereus undatus HOM05D000228 ORTHO05D006129 1.9e-22 109.4 69 73.9
Dinv39017 Davidia involucrata HOM05D000228 ORTHO05D006129 1.8e-17 92.8 77 53.2
Sc01g0008810 Simmondsia chinensis HOM05D001804 ORTHO05D006129 9.1e-17 90.5 69 60.9
vmacro14006 Vaccinium macrocarpon HOM05D000228 ORTHO05D006129 5.0e-15 84.7 71 49.3
Dinv37697 Davidia involucrata HOM05D000228 ORTHO05D006129 6.5e-15 84.3 69 52.2
Lsat_1_v5_gn_3_5900 Lactuca sativa HOM05D000228 ORTHO05D006129 6.5e-15 84.3 69 53.6
Nn6g34281 Nelumbo nucifera HOM05D000228 ORTHO05D006129 8.5e-15 84.0 69 53.6
Rhsim07G0095300 Rhododendron simsii HOM05D000228 ORTHO05D006129 8.5e-15 84.0 69 50.7
Haze_08958 Corylus avellana HOM05D000228 ORTHO05D006129 1.1e-14 83.6 73 52.1
FAN04G1469 Fragaria x ananassa HOM05D000228 ORTHO05D006129 1.1e-14 83.6 69 53.6
CSS0022136 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D006129 3.2e-14 82.0 73 49.3
FvH4_5g01400 Fragaria vesca HOM05D000228 ORTHO05D006129 3.2e-14 82.0 69 53.6
FAN13G2476 Fragaria x ananassa HOM05D000228 ORTHO05D006129 3.2e-14 82.0 69 53.6
FAN18G2520 Fragaria x ananassa HOM05D000228 ORTHO05D006129 3.2e-14 82.0 69 53.6
Hma1.2p1_0138F.1_g062630 Hydrangea macrophylla HOM05D000228 ORTHO05D006129 3.2e-14 82.0 69 52.2
FAN08G3600 Fragaria x ananassa HOM05D000228 ORTHO05D006129 5.5e-14 81.3 69 52.2
GSVIVG01019869001 Vitis vinifera HOM05D000228 ORTHO05D006129 9.4e-14 80.5 69 52.2
Eucgr.D01929 Eucalyptus grandis HOM05D000228 ORTHO05D006129 2.1e-13 79.3 69 53.6
TAR636G2974 Trochodendron aralioides HOM05D000228 ORTHO05D006129 2.7e-13 79.0 69 52.2
Cfa012094 Carpinus fangiana HOM05D000228 ORTHO05D006129 3.6e-13 78.6 69 50.7
Potri.001G111300 Populus trichocarpa HOM05D000228 ORTHO05D006129 4.7e-13 78.2 69 50.7
CiPaw.12G099100 Carya illinoinensis HOM05D000228 ORTHO05D013010 6.1e-13 77.8 71 47.9
ECA246G3981 Erigeron canadensis HOM05D000228 ORTHO05D006129 6.1e-13 77.8 69 50.7
QL12p017019 Quercus lobata HOM05D000228 ORTHO05D006129 6.1e-13 77.8 71 47.9
Aqoxy1G00844 Aquilegia oxysepala HOM05D000228 ORTHO05D006129 1.8e-12 76.3 69 52.2
Sed0014462 Sechium edule HOM05D000228 ORTHO05D006129 2.3e-12 75.9 81 42.0
VMungo1215G3193 Vigna mungo HOM05D000228 ORTHO05D006129 4.0e-12 75.1 69 49.3
CAN.G981.44 Capsicum annuum HOM05D000228 ORTHO05D006129 5.2e-12 74.7 69 49.3
HanXRQChr06g0165071 Helianthus annuus HOM05D000228 ORTHO05D006129 5.2e-12 74.7 69 46.4
Lj2C197T6 Lonicera japonica HOM05D000228 ORTHO05D006129 5.2e-12 74.7 69 49.3
Prupe.5G089300 Prunus persica HOM05D000228 ORTHO05D006129 5.2e-12 74.7 69 49.3
QL05p069269 Quercus lobata HOM05D000228 ORTHO05D006129 6.8e-12 74.3 69 44.9
Glyma.11G026700 Glycine max HOM05D000228 ORTHO05D006129 8.8e-12 73.9 69 47.8
Atru.chr9.1533 Acer truncatum HOM05D000228 ORTHO05D006129 1.2e-11 73.6 69 47.8
Phvul.002G153700 Phaseolus vulgaris HOM05D000228 ORTHO05D006129 1.2e-11 73.6 69 47.8
Lj8C239G8 Lonicera japonica HOM05D000228 ORTHO05D006129 1.5e-11 73.2 70 52.9
Thecc.03G270300 Theobroma cacao HOM05D000228 ORTHO05D006129 1.5e-11 73.2 71 45.1
Migut.A00916 Erythranthe guttata HOM05D000228 ORTHO05D006129 2.0e-11 72.8 73 42.5
PSO478G3868 Papaver somniferum HOM05D000228 ORTHO05D006129 2.0e-11 72.8 69 49.3
PSO782G2782 Papaver somniferum HOM05D000228 ORTHO05D006129 2.0e-11 72.8 69 49.3
Sabra01G0084800 Salix brachista HOM05D000228 ORTHO05D006129 2.0e-11 72.8 69 46.4
ClCG10G003630 Citrullus lanatus HOM05D000228 ORTHO05D006129 2.6e-11 72.4 81 39.5
COL.COLO4_05280 Corchorus olitorius HOM05D000228 ORTHO05D006129 2.6e-11 72.4 69 47.8
Nitab4.5_0001714g0190 Nicotiana tabacum HOM05D000228 ORTHO05D006129 2.6e-11 72.4 69 49.3
Nitab4.5_0007891g0030 Nicotiana tabacum HOM05D000228 ORTHO05D006129 3.4e-11 72.0 69 49.3
RcHm_v2.0_Chr7g0199481 Rosa chinensis HOM05D000228 ORTHO05D006129 4.4e-11 71.6 69 47.8
CAN.G981.46 Capsicum annuum HOM05D000228 ORTHO05D006129 5.7e-11 71.2 69 46.4
ClCG00G000380 Citrullus lanatus HOM05D000228 ORTHO05D006129 5.7e-11 71.2 59 47.5
Glyma.01G215700 Glycine max HOM05D000228 ORTHO05D006129 1.3e-10 70.1 69 47.8
Ciclev10018489m.g Citrus clementina HOM05D000228 ORTHO05D006129 1.7e-10 69.7 70 45.7
Oeu062351.1 Olea europaea HOM05D000228 ORTHO05D006129 1.7e-10 69.7 70 47.1
PGR031G2544 Punica granatum HOM05D000228 ORTHO05D006129 2.2e-10 69.3 69 47.8
Manes.02G028200 Manihot esculenta HOM05D000228 ORTHO05D006129 3.7e-10 68.6 69 42.0
Medtr5g011000 Medicago truncatula HOM05D000228 ORTHO05D006129 3.7e-10 68.6 68 45.6
CsaV3_3G003630 Cucumis sativus L. HOM05D000228 ORTHO05D006129 6.3e-10 67.8 59 47.5
AT1G63020 Arabidopsis thaliana HOM05D000228 ORTHO05D006129 1.1e-09 67.0 60 48.3
MELO3C014034.2 Cucumis melo HOM05D000228 ORTHO05D006129 1.1e-09 67.0 59 47.5
MSTRG.25571 Avicennia marina HOM05D000228 ORTHO05D006129 1.4e-09 66.6 70 45.7
Psat2g181400 Pisum sativum HOM05D000228 ORTHO05D006129 1.4e-09 66.6 68 44.1
TPR.G6660 Trifolium pratense HOM05D000228 ORTHO05D006129 1.4e-09 66.6 79 43.0
Gohir.D08G196600 Gossypium hirsutum HOM05D000228 ORTHO05D006129 2.4e-09 65.9 71 43.7
Gorai.004G207300 Gossypium raimondii HOM05D000228 ORTHO05D006129 2.4e-09 65.9 71 43.7
Gohir.A08G178200 Gossypium hirsutum HOM05D000228 ORTHO05D006129 3.1e-09 65.5 71 43.7
Lalb_Chr09g0324731 Lupinus albus HOM05D000228 ORTHO05D006129 3.1e-09 65.5 73 43.8
TWI15G0190 Tripterygium wilfordii HOM05D000228 ORTHO05D006129 4.1e-09 65.1 69 44.9
arahy.Tifrunner.gnm1.ann1.RU3ERW Arachis hypogaea HOM05D000228 ORTHO05D006129 9.1e-09 63.9 69 43.5
AL2G12580 Arabidopsis lyrata HOM05D000228 ORTHO05D006129 1.2e-08 63.5 60 45.0
Lalb_Chr05g0225101 Lupinus albus HOM05D000228 ORTHO05D013010 1.2e-08 63.5 69 44.9
Carub.0002s0198 Capsella rubella HOM05D000228 ORTHO05D006129 2.7e-08 62.4 60 45.0
Sp2g01560 Schrenkiella parvula HOM05D000228 ORTHO05D006129 4.5e-08 61.6 60 45.0
THA.LOC104809424 Tarenaya hassleriana HOM05D000228 ORTHO05D006129 1.0e-07 60.5 60 41.7
Aa31LG2G520 Aethionema arabicum HOM05D000228 ORTHO05D006129 1.3e-07 60.1 60 45.0
BcaC06g31930 Brassica carinata HOM05D000228 ORTHO05D006129 1.3e-07 60.1 60 41.7
A03p68370 Brassica napus HOM05D000228 ORTHO05D006129 1.3e-07 60.1 60 41.7
BraA01t02634Z Brassica rapa HOM05D000228 ORTHO05D006129 1.3e-07 60.1 60 41.7
CANSAT21G2272 Cannabis sativa HOM05D000228 ORTHO05D006129 2.3e-07 59.3 86 38.4
MBI12_g02094_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D006129 2.3e-07 59.3 74 39.2
Gohir.A11G021201 Gossypium hirsutum HOM05D000228 ORTHO05D013010 2.9e-07 58.9 69 42.0
Lj2g0010994 Lotus japonicus HOM05D000228 ORTHO05D006129 3.8e-07 58.5 72 43.1
BcaC02g10404 Brassica carinata HOM05D000228 ORTHO05D006129 5.0e-07 58.2 60 40.0
C04p29320 Brassica napus HOM05D000228 ORTHO05D006129 5.0e-07 58.2 60 40.0
BolC4t24462H Brassica oleracea HOM05D000228 ORTHO05D006129 5.0e-07 58.2 60 40.0
CARHR048610 Cardamine hirsuta HOM05D000228 ORTHO05D013010 8.6e-07 57.4 69 39.1
DCAR_008426 Daucus carota HOM05D000228 ORTHO05D006129 8.6e-07 57.4 60 50.0
DCAR_006765 Daucus carota HOM05D000228 ORTHO05D006129 1.1e-06 57.0 70 42.9
SHI01912 Sapria himalayana HOM05D000228 ORTHO05D006129 1.5e-06 56.6 40 62.5
unitig_22.g5477 Utricularia gibba HOM05D000228 ORTHO05D006129 1.9e-06 56.2 53 45.3
Cc08_g13910 Coffea canephora HOM05D000228 ORTHO05D006129 2.5e-06 55.8 56 46.4
Lalb_Chr05g0214761 Lupinus albus HOM05D000228 ORTHO05D006129 2.5e-06 55.8 71 38.0
Os04g0572600 Oryza sativa ssp. japonica HOM05D000228 ORTHO05D006129 3.3e-06 55.5 58 43.1
Os09g0555200 Oryza sativa ssp. japonica HOM05D000228 ORTHO05D006129 3.3e-06 55.5 64 39.1
A09p13380 Brassica napus HOM05D000228 ORTHO05D006129 4.2e-06 55.1 60 40.0
TWI60G0610 Tripterygium wilfordii HOM05D000228 ORTHO05D006129 5.5e-06 54.7 69 36.2
BraA09t36984Z Brassica rapa HOM05D000228 ORTHO05D006129 9.5e-06 53.9 60 38.3


User provided reference genes

Program Settings