Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA248G0902 Erigeron canadensis HOM05D006016 ORTHO05D007553 3.2e-159 565.1 298 100.0
HanXRQChr01g0002401 Helianthus annuus HOM05D006016 ORTHO05D007553 2.4e-130 469.2 291 84.2
Lsat_1_v5_gn_5_187441 Lactuca sativa HOM05D006016 ORTHO05D007553 3.5e-129 465.3 294 84.0
Oeu011169.1 Olea europaea HOM05D006016 ORTHO05D007553 9.6e-103 377.5 252 74.2
Potri.014G138500 Populus trichocarpa HOM05D006016 ORTHO05D007553 5.3e-101 371.7 268 69.8
Nitab4.5_0007392g0030 Nicotiana tabacum HOM05D006016 ORTHO05D007553 3.4e-100 369.0 252 73.8
Nitab4.5_0006180g0080 Nicotiana tabacum HOM05D006016 ORTHO05D007553 2.9e-99 365.9 286 67.8
Migut.D00263 Erythranthe guttata HOM05D006016 ORTHO05D007553 4.9e-99 365.2 251 74.1
MSTRG.18215 Avicennia marina HOM05D006016 ORTHO05D007553 6.4e-99 364.8 287 68.6
DCAR_002754 Daucus carota HOM05D006016 ORTHO05D007553 2.4e-98 362.8 303 66.7
GSVIVG01011095001 Vitis vinifera HOM05D006016 ORTHO05D007553 2.1e-97 359.8 274 69.7
Duzib138G0992 Durio zibethinus HOM05D006016 ORTHO05D007553 3.9e-96 355.5 278 66.9
Gohir.A08G069800 Gossypium hirsutum HOM05D006016 ORTHO05D007553 3.9e-96 355.5 247 74.1
SGA_v2.0_scaffold1G00448 Striga asiatica HOM05D006016 ORTHO05D007553 6.7e-96 354.8 252 72.2
Cc02_g34480 Coffea canephora HOM05D006016 ORTHO05D007553 8.7e-96 354.4 289 67.1
Aqoxy2G03243 Aquilegia oxysepala HOM05D006016 ORTHO05D007553 1.9e-95 353.2 295 63.4
COL.COLO4_09142 Corchorus olitorius HOM05D006016 ORTHO05D007553 2.5e-95 352.8 253 71.9
Haze_04746 Corylus avellana HOM05D006016 ORTHO05D007553 3.3e-95 352.4 302 63.9
Sopen09g026490 Solanum pennellii HOM05D006016 ORTHO05D007553 3.3e-95 352.4 280 67.1
PGSC0003DMG400000944 Solanum tuberosum HOM05D006016 ORTHO05D007553 3.3e-95 352.4 253 72.7
Thecc.01G283800 Theobroma cacao HOM05D006016 ORTHO05D007553 4.3e-95 352.1 281 67.6
Gorai.004G083400 Gossypium raimondii HOM05D006016 ORTHO05D007553 5.6e-95 351.7 252 73.8
Peaxi162Scf00104g00220 Petunia axillaris HOM05D006016 ORTHO05D007553 5.6e-95 351.7 255 70.2
PGR044G1280 Punica granatum HOM05D006016 ORTHO05D007553 5.6e-95 351.7 252 73.4
CSS0041846 Camellia sinensis var. sinensis HOM05D006016 ORTHO05D007553 1.3e-94 350.5 252 72.2
MD03G1268900 Malus domestica HOM05D006016 ORTHO05D007553 1.3e-94 350.5 295 64.7
Solyc09g064790.3 Solanum lycopersicum HOM05D006016 ORTHO05D007553 1.3e-94 350.5 274 68.2
Cfa006104 Carpinus fangiana HOM05D006016 ORTHO05D007553 2.1e-94 349.7 302 63.9
Glyma.10G024400 Glycine max HOM05D006016 ORTHO05D007553 2.1e-94 349.7 281 65.8
MD11G1289700 Malus domestica HOM05D006016 ORTHO05D007553 2.1e-94 349.7 260 69.2
QL12p022630 Quercus lobata HOM05D006016 ORTHO05D007553 2.1e-94 349.7 299 62.9
Prupe.8G244900 Prunus persica HOM05D006016 ORTHO05D007553 3.7e-94 349.0 250 72.0
Sabra14G0104500 Salix brachista HOM05D006016 ORTHO05D007553 3.7e-94 349.0 267 68.2
SalBow4G2498 Salvia bowleyana HOM05D006016 ORTHO05D007553 3.7e-94 349.0 272 68.8
Hma1.2p1_0628F.1_g191900 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 6.2e-94 348.2 251 71.3
PSO170G1401 Papaver somniferum HOM05D006016 ORTHO05D007553 8.1e-94 347.8 274 65.7
PSO407G0301 Papaver somniferum HOM05D006016 ORTHO05D007553 1.1e-93 347.4 274 65.7
Manes.01G210000 Manihot esculenta HOM05D006016 ORTHO05D007553 5.3e-93 345.1 291 63.2
CAN.G962.6 Capsicum annuum HOM05D006016 ORTHO05D007553 3.4e-92 342.4 285 65.6
arahy.Tifrunner.gnm1.ann1.Q6PPUG Arachis hypogaea HOM05D006016 ORTHO05D007553 7.6e-92 341.3 255 69.8
CANSAT80G0718 Cannabis sativa HOM05D006016 ORTHO05D007553 1.0e-91 340.9 278 66.5
arahy.Tifrunner.gnm1.ann1.NXI6YJ Arachis hypogaea HOM05D006016 ORTHO05D007553 1.7e-91 340.1 255 70.2
CiPaw.07G094500 Carya illinoinensis HOM05D006016 ORTHO05D007553 2.2e-91 339.7 298 62.4
Nn1g02145 Nelumbo nucifera HOM05D006016 ORTHO05D007553 2.9e-91 339.3 253 69.2
RcHm_v2.0_Chr1g0321311 Rosa chinensis HOM05D006016 ORTHO05D007553 2.9e-91 339.3 252 68.7
Sc05g0005010 Simmondsia chinensis HOM05D006016 ORTHO05D007553 4.9e-91 338.6 282 66.3
AUR62004906 Chenopodium quinoa HOM05D006016 ORTHO05D007553 8.4e-91 337.8 253 68.8
unitig_61.g26325 Utricularia gibba HOM05D006016 ORTHO05D007553 1.4e-90 337.0 277 65.3
FvH4_7g02610 Fragaria vesca HOM05D006016 ORTHO05D007553 3.2e-90 335.9 252 68.3
EL10Ac4g09090 Beta vulgaris HOM05D006016 ORTHO05D007553 9.3e-90 334.3 281 62.6
Cpa.g.sc485.5 Carica papaya HOM05D006016 ORTHO05D007553 9.3e-90 334.3 232 75.4
CARHR124900 Cardamine hirsuta HOM05D006016 ORTHO05D007553 1.2e-89 334.0 278 65.1
BcaB02g08738 Brassica carinata HOM05D006016 ORTHO05D007553 2.7e-89 332.8 258 67.8
Eucgr.K03393 Eucalyptus grandis HOM05D006016 ORTHO05D007553 2.7e-89 332.8 276 66.7
Eucgr.K03395 Eucalyptus grandis HOM05D006016 ORTHO05D007553 2.7e-89 332.8 253 70.0
FAN03G2867 Fragaria x ananassa HOM05D006016 ORTHO05D007553 3.5e-89 332.4 263 65.8
MELO3C014346.2 Cucumis melo HOM05D006016 ORTHO05D007553 4.6e-89 332.0 298 62.8
Medtr1g072640 Medicago truncatula HOM05D006016 ORTHO05D007553 6.0e-89 331.6 294 62.9
ClCG07G000070 Citrullus lanatus HOM05D006016 ORTHO05D007553 7.9e-89 331.3 300 63.0
Carub.0004s3083 Capsella rubella HOM05D006016 ORTHO05D007553 1.8e-88 330.1 261 67.0
Sp4g30040 Schrenkiella parvula HOM05D006016 ORTHO05D007553 2.3e-88 329.7 258 67.4
Ca_09774_v3 Cicer arietinum L. HOM05D006016 ORTHO05D007553 3.9e-88 328.9 258 68.6
Aa31LG4G3290 Aethionema arabicum HOM05D006016 ORTHO05D007553 8.7e-88 327.8 274 65.0
arahy.Tifrunner.gnm1.ann1.95RMVD Arachis hypogaea HOM05D006016 ORTHO05D007553 8.7e-88 327.8 255 67.8
CDE01G0302 Ceratophyllum demersum HOM05D006016 ORTHO05D007553 1.5e-87 327.0 275 64.7
Thhalv10001558m.g Eutrema salsugineum HOM05D006016 ORTHO05D007553 1.5e-87 327.0 280 63.2
Sed0013000 Sechium edule HOM05D006016 ORTHO05D007553 1.5e-87 327.0 255 68.2
TPR.G1544 Trifolium pratense HOM05D000563 ORTHO05D000536 1.5e-87 327.0 292 63.7
Hund06953 Selenicereus undatus HOM05D006016 ORTHO05D007553 5.7e-87 325.1 283 63.3
ATR0626G088 Amborella trichopoda HOM05D006016 ORTHO05D007553 9.6e-87 324.3 284 61.3
Lalb_Chr21g0306561 Lupinus albus HOM05D006016 ORTHO05D007553 9.6e-87 324.3 256 66.8
Ciclev10020923m.g Citrus clementina HOM05D006016 ORTHO05D007553 1.3e-86 323.9 247 68.0
AUR62032753 Chenopodium quinoa HOM05D006016 ORTHO05D007553 2.1e-86 323.2 232 71.6
A05p00010 Brassica napus HOM05D006016 ORTHO05D007553 3.7e-86 322.4 254 67.3
BraA05t18997Z Brassica rapa HOM05D006016 ORTHO05D007553 3.7e-86 322.4 254 67.3
TAR633G0970 Trochodendron aralioides HOM05D006016 ORTHO05D007553 2.4e-85 319.7 232 72.8
Rhsim01G0276200 Rhododendron simsii HOM05D006016 ORTHO05D007553 1.2e-84 317.4 393 48.6
Lj2C1178T3 Lonicera japonica HOM05D006016 ORTHO05D007553 1.5e-84 317.0 218 73.9
FAN01G1545 Fragaria x ananassa HOM05D006016 ORTHO05D007553 2.6e-84 316.2 252 65.5
AL4G47720 Arabidopsis lyrata HOM05D006016 ORTHO05D007553 3.4e-84 315.8 262 65.3
Atru.chr5.1361 Acer truncatum HOM05D006016 ORTHO05D007553 5.9e-84 315.1 247 66.0
THA.LOC104823056 Tarenaya hassleriana HOM05D006016 ORTHO05D007553 6.5e-83 311.6 253 65.2
BolC4t21679H Brassica oleracea HOM05D006016 ORTHO05D007553 1.4e-82 310.5 301 58.5
CsaV3_6G036870 Cucumis sativus L. HOM05D006016 ORTHO05D007553 2.5e-82 309.7 298 60.4
BolSC55t61226H Brassica oleracea HOM05D006016 ORTHO05D007553 4.2e-82 308.9 301 58.1
Os05g0393400 Oryza sativa ssp. japonica HOM05D006016 ORTHO05D007553 3.6e-81 305.8 241 64.3
BolSC55t61222H Brassica oleracea HOM05D006016 ORTHO05D007553 1.8e-80 303.5 252 65.9
Phvul.007G169400 Phaseolus vulgaris HOM05D006016 ORTHO05D007553 1.5e-79 300.4 278 60.4
HPP92_025128 Vanilla planifolia HOM05D006016 ORTHO05D007553 2.2e-78 296.6 241 63.5
AT2G48120 Arabidopsis thaliana HOM05D006016 ORTHO05D007553 1.8e-77 293.5 210 71.0
BNapus_Darmor_BZH_scaffold_188p00130 Brassica napus HOM05D006016 ORTHO05D007553 1.8e-77 293.5 218 69.7
BcaC02g12797 Brassica carinata HOM05D006016 ORTHO05D007553 4.1e-77 292.4 282 59.2
TWI14G0073 Tripterygium wilfordii HOM05D006016 ORTHO05D007553 1.2e-76 290.8 294 55.4
BNapus_Darmor_BZH_scaffold_188p00120 Brassica napus HOM05D006016 ORTHO05D007553 2.0e-76 290.0 208 70.7
Lj5g0023557 Lotus japonicus HOM05D006016 ORTHO05D007553 5.9e-76 288.5 257 63.8
Hma1.2p1_0628F.1_g191890 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 1.3e-75 287.3 192 76.0
Zm00001eb287380 Zea mays HOM05D006016 ORTHO05D007553 1.3e-75 287.3 231 64.1
Psat6g138080 Pisum sativum HOM05D006016 ORTHO05D007553 4.6e-73 278.9 211 68.7
Gohir.D08G079100 Gossypium hirsutum HOM05D006016 ORTHO05D007553 1.0e-72 277.7 247 62.3
Dinv32962 Davidia involucrata HOM05D006016 ORTHO05D007553 2.6e-68 263.1 167 76.0
BcaC02g12566 Brassica carinata HOM05D006016 ORTHO05D007553 6.5e-67 258.5 283 54.8
QL10p008835 Quercus lobata HOM05D006016 ORTHO05D007553 1.1e-66 257.7 187 71.7
BolSC55t61219H Brassica oleracea HOM05D006016 ORTHO05D007553 1.4e-64 250.8 207 66.2
arahy.Tifrunner.gnm1.ann1.9IJ3BZ Arachis hypogaea HOM05D006016 ORTHO05D007553 2.2e-62 243.4 268 54.5
vmacro14936 Vaccinium macrocarpon HOM05D006016 ORTHO05D007553 8.2e-62 241.5 301 48.2
SEGI_37912 Sequoiadendron giganteum HOM05D006016 ORTHO05D007553 1.2e-60 237.7 253 51.8
SMO360G0019 Selaginella moellendorffii HOM05D006016 ORTHO05D007553 7.7e-60 235.0 235 54.9
BolSC55t61223H Brassica oleracea HOM05D006016 ORTHO05D007553 1.3e-59 234.2 182 69.2
Actinidia21099 Actinidia chinensis HOM05D006016 ORTHO05D007553 2.2e-54 216.9 243 53.9
Lj9C654T2 Lonicera japonica HOM05D006016 ORTHO05D007553 7.7e-52 208.4 190 58.4
Mapoly0059s0024 Marchantia polymorpha HOM05D006016 ORTHO05D007553 8.5e-51 204.9 236 49.2
Pp3c5_15510 Physcomitrium patens HOM05D006016 ORTHO05D007553 3.0e-48 196.4 279 44.4
Glyma.02G149402 Glycine max HOM05D006016 ORTHO05D007553 2.4e-45 186.8 158 65.8
AagrBONN_evm.TU.Sc2ySwM_228.5509 Anthoceros agrestis HOM05D006016 ORTHO05D007553 4.7e-41 172.6 176 49.4
BNapus_Darmor_BZH_scaffold_188p00100 Brassica napus HOM05D006016 ORTHO05D007553 2.0e-31 140.6 111 61.3
BraA05t18995Z Brassica rapa HOM05D006016 ORTHO05D007553 9.8e-31 138.3 111 60.4
Actinidia24878 Actinidia chinensis HOM05D006016 ORTHO05D007553 1.6e-28 131.0 169 49.1
BNapus_Darmor_BZH_scaffold_188p00090 Brassica napus HOM05D001484 ORTHO05D007553 2.3e-27 127.1 109 66.1
QL09p051040 Quercus lobata HOM05D006016 ORTHO05D007553 5.0e-27 125.9 120 58.3
CBR_g23747 Chara braunii HOM05D006016 ORTHO05D007553 8.3e-22 108.6 252 34.1
Oeu001432.1 Olea europaea HOM05D006016 ORTHO05D007553 5.0e-19 99.4 84 52.4
QL09p050526 Quercus lobata HOM05D006016 ORTHO05D337571 6.6e-19 99.0 100 57.0
BcaC08g43234 Brassica carinata HOM05D006016 ORTHO05D007553 1.2e-17 94.7 72 61.1
MBI04_g32261_MAGBIO Magnolia biondii HOM05D006016 ORTHO05D007553 1.1e-13 81.6 70 62.9
Dinv13370 Davidia involucrata HOM05D006016 ORTHO05D007553 4.1e-13 79.7 104 50.0
Dinv01676 Davidia involucrata HOM05D006016 ORTHO05D007553 1.5e-10 71.2 65 67.7
AUR62004907 Chenopodium quinoa HOM05D006016 ORTHO05D007553 2.8e-09 67.0 61 55.7
Dinv16891 Davidia involucrata HOM05D006016 ORTHO05D007553 2.0e-07 60.8 65 61.5
QL09p050966 Quercus lobata HOM05D001484 ORTHO05D001564 2.6e-07 60.5 35 62.9
BolC6t35694H Brassica oleracea HOM05D006016 ORTHO05D007553 5.8e-07 59.3 62 58.1


User provided reference genes

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