Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G2383 Erigeron canadensis HOM05D004857 ORTHO05D005663 2.7e-55 218.4 106 100.0
ECA234G1433 Erigeron canadensis HOM05D000959 ORTHO05D000775 1.5e-18 96.3 89 59.6
Lsat_1_v5_gn_5_138760 Lactuca sativa HOM05D004857 ORTHO05D005663 5.8e-18 94.4 86 57.0
HanXRQChr12g0355141 Helianthus annuus HOM05D004857 ORTHO05D005663 7.5e-18 94.0 88 58.0
Duzib187G1561 Durio zibethinus HOM05D004857 ORTHO05D005663 2.2e-17 92.4 86 54.7
Thecc.09G070000 Theobroma cacao HOM05D004857 ORTHO05D005663 6.4e-17 90.9 92 52.2
AL4G19270 Arabidopsis lyrata HOM05D004857 ORTHO05D005663 1.1e-16 90.1 85 52.9
Carub.0004s0646 Capsella rubella HOM05D004857 ORTHO05D005663 1.1e-16 90.1 85 52.9
Gohir.A05G036200 Gossypium hirsutum HOM05D004857 ORTHO05D005663 1.1e-16 90.1 92 51.1
Gohir.D05G037700 Gossypium hirsutum HOM05D004857 ORTHO05D005663 1.1e-16 90.1 92 51.1
Gorai.009G038200 Gossypium raimondii HOM05D004857 ORTHO05D005663 1.1e-16 90.1 92 51.1
SalBow6G1194 Salvia bowleyana HOM05D004857 ORTHO05D005663 1.1e-16 90.1 86 53.5
Hund21824 Selenicereus undatus HOM05D004857 ORTHO05D005663 1.1e-16 90.1 96 49.0
THA.LOC104819454 Tarenaya hassleriana HOM05D004857 ORTHO05D005663 1.1e-16 90.1 86 53.5
AT2G26460 Arabidopsis thaliana HOM05D004857 ORTHO05D005663 1.4e-16 89.7 86 52.3
CANSAT56G1105 Cannabis sativa HOM05D004857 ORTHO05D005663 1.4e-16 89.7 91 50.5
Duzib168G0723 Durio zibethinus HOM05D004857 ORTHO05D005663 1.4e-16 89.7 86 53.5
Sp4g07340 Schrenkiella parvula HOM05D004857 ORTHO05D005663 1.4e-16 89.7 85 52.9
vmacro17076 Vaccinium macrocarpon HOM05D004857 ORTHO05D005663 1.4e-16 89.7 86 53.5
arahy.Tifrunner.gnm1.ann1.N9ATPP Arachis hypogaea HOM05D004857 ORTHO05D005663 1.9e-16 89.4 88 53.4
BcaB08g35315 Brassica carinata HOM05D004857 ORTHO05D005663 1.9e-16 89.4 85 54.1
CARHR114530 Cardamine hirsuta HOM05D004857 ORTHO05D005663 1.9e-16 89.4 86 52.3
Cfa002936 Carpinus fangiana HOM05D004857 ORTHO05D005663 1.9e-16 89.4 86 52.3
Potri.018G064100 Populus trichocarpa HOM05D004857 ORTHO05D005663 1.9e-16 89.4 86 52.3
Sabra18G0057000 Salix brachista HOM05D004857 ORTHO05D005663 1.9e-16 89.4 86 52.3
vmacro03340 Vaccinium macrocarpon HOM05D004857 ORTHO05D005663 1.9e-16 89.4 87 52.9
EL10Ac4g09573 Beta vulgaris HOM05D004857 ORTHO05D005663 2.4e-16 89.0 90 53.3
Solyc07g017490.3 Solanum lycopersicum HOM05D004857 ORTHO05D005663 2.4e-16 89.0 93 49.5
Sopen07g006280 Solanum pennellii HOM05D004857 ORTHO05D005663 2.4e-16 89.0 93 49.5
COL.COLO4_21204 Corchorus olitorius HOM05D004857 ORTHO05D005663 3.2e-16 88.6 92 48.9
Lj6g0010651 Lotus japonicus HOM05D004857 ORTHO05D005663 3.2e-16 88.6 86 50.0
Sc08g0005030 Simmondsia chinensis HOM05D004857 ORTHO05D005663 3.2e-16 88.6 92 50.0
MSTRG.19426 Avicennia marina HOM05D004857 ORTHO05D005663 4.1e-16 88.2 90 54.4
A09p55180 Brassica napus HOM05D004857 ORTHO05D005663 4.1e-16 88.2 87 51.7
BraA09t40926Z Brassica rapa HOM05D004857 ORTHO05D005663 4.1e-16 88.2 87 52.9
CAN.G457.2 Capsicum annuum HOM05D004857 ORTHO05D005663 4.1e-16 88.2 92 51.1
PSO104G0255 Papaver somniferum HOM05D004857 ORTHO05D005663 4.1e-16 88.2 90 52.2
PSO421G0319 Papaver somniferum HOM05D004857 ORTHO05D005663 4.1e-16 88.2 90 53.3
BcaC07g40818 Brassica carinata HOM05D004857 ORTHO05D005663 5.4e-16 87.8 87 50.6
C08p38110 Brassica napus HOM05D004857 ORTHO05D005663 5.4e-16 87.8 87 50.6
BolC8t51386H Brassica oleracea HOM05D004857 ORTHO05D005663 5.4e-16 87.8 87 50.6
Ciclev10007866m.g Citrus clementina HOM05D004857 ORTHO05D005663 5.4e-16 87.8 92 48.9
Eucgr.C00765 Eucalyptus grandis HOM05D004857 ORTHO05D005663 5.4e-16 87.8 92 48.9
PGSC0003DMG401015931 Solanum tuberosum HOM05D004857 ORTHO05D005663 5.4e-16 87.8 93 52.7
GSVIVG01015011001 Vitis vinifera HOM05D004857 ORTHO05D005663 5.4e-16 87.8 92 54.3
Actinidia39614 Actinidia chinensis HOM05D004857 ORTHO05D005663 7.1e-16 87.4 86 55.8
ATR0681G246 Amborella trichopoda HOM05D004857 ORTHO05D005663 7.1e-16 87.4 86 52.3
arahy.Tifrunner.gnm1.ann1.N970BB Arachis hypogaea HOM05D004857 ORTHO05D005663 7.1e-16 87.4 88 52.3
CDE05G0310 Ceratophyllum demersum HOM05D004857 ORTHO05D005663 7.1e-16 87.4 85 55.3
Cc06_g12730 Coffea canephora HOM05D004857 ORTHO05D005663 7.1e-16 87.4 92 51.1
Migut.J00878 Erythranthe guttata HOM05D004857 ORTHO05D005663 7.1e-16 87.4 90 54.4
Nn7g37725 Nelumbo nucifera HOM05D004857 ORTHO05D005663 7.1e-16 87.4 86 53.5
Oeu000275.2 Olea europaea HOM05D004857 ORTHO05D005663 7.1e-16 87.4 94 51.1
HPP92_017869 Vanilla planifolia HOM05D004857 ORTHO05D005663 7.1e-16 87.4 84 53.6
Dinv44702 Davidia involucrata HOM05D004857 ORTHO05D005663 9.2e-16 87.0 86 51.2
Medtr2g044200 Medicago truncatula HOM05D004857 ORTHO05D005663 9.2e-16 87.0 85 50.6
Nitab4.5_0001114g0050 Nicotiana tabacum HOM05D004857 ORTHO05D005663 9.2e-16 87.0 92 50.0
Nitab4.5_0002665g0010 Nicotiana tabacum HOM05D004857 ORTHO05D005663 9.2e-16 87.0 92 50.0
TAR383G0334 Trochodendron aralioides HOM05D004857 ORTHO05D005663 9.2e-16 87.0 86 55.8
CiPaw.03G200100 Carya illinoinensis HOM05D004857 ORTHO05D005663 1.2e-15 86.7 86 50.0
Ca_02281_v3 Cicer arietinum L. HOM05D004857 ORTHO05D005663 1.2e-15 86.7 83 50.6
Actinidia30259 Actinidia chinensis HOM05D004857 ORTHO05D005663 1.6e-15 86.3 86 55.8
Glyma.09G074100 Glycine max HOM05D004857 ORTHO05D005663 1.6e-15 86.3 86 50.0
Glyma.15G183100 Glycine max HOM05D004857 ORTHO05D005663 1.6e-15 86.3 86 50.0
MBI19_g37995_MAGBIO Magnolia biondii HOM05D004857 ORTHO05D005663 1.6e-15 86.3 86 50.0
Oeu041809.2 Olea europaea HOM05D004857 ORTHO05D005663 1.6e-15 86.3 88 53.4
Phvul.009G223400 Phaseolus vulgaris HOM05D004857 ORTHO05D005663 1.6e-15 86.3 86 50.0
PGR142G2122 Punica granatum HOM05D004857 ORTHO05D005663 1.6e-15 86.3 92 45.7
SGA_v2.0_scaffold31G12698 Striga asiatica HOM05D004857 ORTHO05D005663 1.6e-15 86.3 90 51.1
VMungo1309G0172 Vigna mungo HOM05D004857 ORTHO05D005663 1.6e-15 86.3 86 50.0
Cpa.g.sc3709.1 Carica papaya HOM05D004857 ORTHO05D005663 2.1e-15 85.9 85 50.6
AUR62000486 Chenopodium quinoa HOM05D004857 ORTHO05D005663 2.1e-15 85.9 94 48.9
AUR62006828 Chenopodium quinoa HOM05D004857 ORTHO05D005663 2.1e-15 85.9 94 48.9
DCAR_024780 Daucus carota HOM05D004857 ORTHO05D005663 2.1e-15 85.9 85 54.1
Lalb_Chr08g0232851 Lupinus albus HOM05D004857 ORTHO05D005663 2.1e-15 85.9 86 48.8
MD15G1223900 Malus domestica HOM05D004857 ORTHO05D005663 2.7e-15 85.5 86 51.2
AagrBONN_evm.TU.Sc2ySwM_344.4798 Anthoceros agrestis HOM05D004857 ORTHO05D005663 3.5e-15 85.1 90 50.0
Aqoxy6G02713 Aquilegia oxysepala HOM05D004857 ORTHO05D005663 3.5e-15 85.1 88 52.3
MD02G1102700 Malus domestica HOM05D004857 ORTHO05D005663 3.5e-15 85.1 86 52.3
QL11p002992 Quercus lobata HOM05D004857 ORTHO05D005663 3.5e-15 85.1 94 51.1
Manes.16G090200 Manihot esculenta HOM05D004857 ORTHO05D005663 4.6e-15 84.7 86 51.2
RcHm_v2.0_Chr2g0095991 Rosa chinensis HOM05D004857 ORTHO05D005663 6.0e-15 84.3 86 48.8
TPR.G27074 Trifolium pratense HOM05D004857 ORTHO05D005663 6.0e-15 84.3 85 49.4
CSS0030162 Camellia sinensis var. sinensis HOM05D004857 ORTHO05D005663 7.8e-15 84.0 86 54.7
FAN28G2840 Fragaria x ananassa HOM05D004857 ORTHO05D005663 7.8e-15 84.0 87 47.1
SMO266G0005 Selaginella moellendorffii HOM05D004857 ORTHO05D005663 7.8e-15 84.0 91 49.5
Os11g0146700 Oryza sativa ssp. japonica HOM05D004857 ORTHO05D005663 1.0e-14 83.6 86 48.8
Psat1g138640 Pisum sativum HOM05D004857 ORTHO05D005663 1.0e-14 83.6 85 49.4
FvH4_1g09440 Fragaria vesca HOM05D004857 ORTHO05D005663 1.3e-14 83.2 87 48.3
FAN19G2563 Fragaria x ananassa HOM05D004857 ORTHO05D005663 1.3e-14 83.2 87 48.3
FAN23G0125 Fragaria x ananassa HOM05D004857 ORTHO05D005663 1.3e-14 83.2 87 48.3
SHI27983 Sapria himalayana HOM05D004857 ORTHO05D005663 1.3e-14 83.2 89 47.2
Zm00001eb405000 Zea mays HOM05D004857 ORTHO05D005663 1.3e-14 83.2 92 45.7
Thhalv10001246m.g Eutrema salsugineum HOM05D004857 ORTHO05D005663 1.7e-14 82.8 85 49.4
Rhsim05G0001900 Rhododendron simsii HOM05D004857 ORTHO05D005663 1.7e-14 82.8 86 51.2
Pp3c19_4680 Physcomitrium patens HOM05D004857 ORTHO05D005663 3.0e-14 82.0 84 54.8
FAN26G0201 Fragaria x ananassa HOM05D004857 ORTHO05D005663 3.9e-14 81.6 87 47.1
FAN26G1404 Fragaria x ananassa HOM05D004857 ORTHO05D005663 3.9e-14 81.6 87 47.1
Prupe.7G191600 Prunus persica HOM05D004857 ORTHO05D005663 3.9e-14 81.6 86 52.3
SEGI_40202 Sequoiadendron giganteum HOM05D004857 ORTHO05D005663 3.9e-14 81.6 85 52.9
TWI32G0792 Tripterygium wilfordii HOM05D004857 ORTHO05D005663 3.9e-14 81.6 86 48.8
Aa31LG5G9410 Aethionema arabicum HOM05D004857 ORTHO05D005663 5.1e-14 81.3 117 41.9
Sed0019967 Sechium edule HOM05D004857 ORTHO05D005663 1.1e-13 80.1 86 46.5
MELO3C009580.2 Cucumis melo HOM05D004857 ORTHO05D005663 1.5e-13 79.7 86 46.5
CsaV3_3G038370 Cucumis sativus L. HOM05D004857 ORTHO05D005663 1.5e-13 79.7 86 46.5
Mapoly0117s0005 Marchantia polymorpha HOM05D004857 ORTHO05D005663 1.9e-13 79.3 91 49.5
Zm00001eb163350 Zea mays HOM05D004857 ORTHO05D005663 1.9e-13 79.3 93 39.8
Lj4A920T60 Lonicera japonica HOM05D004857 ORTHO05D005663 3.3e-13 78.6 86 47.7
TWI34G1843 Tripterygium wilfordii HOM05D004857 ORTHO05D005663 3.3e-13 78.6 86 46.5
SMO270G0035 Selaginella moellendorffii HOM05D004857 ORTHO05D005663 5.6e-13 77.8 81 54.3
ClCG10G017920 Citrullus lanatus HOM05D004857 ORTHO05D005663 7.3e-13 77.4 85 45.9
CBR_g41264 Chara braunii HOM05D004857 ORTHO05D005663 1.8e-11 72.8 95 43.2
BcaB08g35308 Brassica carinata HOM05D004857 ORTHO05D005663 8.9e-11 70.5 83 44.6
BcaB08g35309 Brassica carinata HOM05D004857 ORTHO05D005663 4.4e-10 68.2 103 39.8
BcaB08g35312 Brassica carinata HOM05D004857 ORTHO05D005663 4.4e-10 68.2 103 39.8
BcaB08g35314 Brassica carinata HOM05D004857 ORTHO05D005663 4.4e-10 68.2 103 39.8
HanXRQChr12g0355211 Helianthus annuus HOM05D004857 ORTHO05D005663 3.8e-09 65.1 33 84.8
Peaxi162Scf01184g10017 Petunia axillaris HOM05D004857 ORTHO05D005663 4.1e-08 61.6 38 65.8
CDE05G0890 Ceratophyllum demersum HOM05D004857 ORTHO05D005663 7.1e-08 60.8 34 70.6
Atru.chr7.1769 Acer truncatum HOM05D004857 ORTHO05D005663 6.0e-07 57.8 40 60.0
PSO541G5242 Papaver somniferum HOM05D004857 ORTHO05D005663 1.7e-06 56.2 29 79.3
PSO407G0399 Papaver somniferum HOM05D001929 ORTHO05D002426 6.6e-06 54.3 29 75.9


User provided reference genes

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