Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA247G0991 Erigeron canadensis HOM05D000001 ORTHO05D000501 3.1e-142 508.4 256 100.0
Lsat_1_v5_gn_9_17140 Lactuca sativa HOM05D000001 ORTHO05D000501 3.1e-49 199.5 108 81.5
HanXRQChr08g0231371 Helianthus annuus HOM05D000001 ORTHO05D000501 1.2e-45 187.6 130 66.9
Sed0009372 Sechium edule HOM05D000001 ORTHO05D000501 1.7e-39 167.2 114 66.7
THA.LOC104815389 Tarenaya hassleriana HOM05D000001 ORTHO05D000501 1.7e-39 167.2 125 59.2
BcaC02g09465 Brassica carinata HOM05D000001 ORTHO05D000501 8.4e-39 164.9 172 47.1
FvH4_2g17310 Fragaria vesca HOM05D000001 ORTHO05D000501 1.1e-38 164.5 119 61.3
FAN27G1618 Fragaria x ananassa HOM05D000328 ORTHO05D000501 1.1e-38 164.5 113 62.8
RcHm_v2.0_Chr6g0281821 Rosa chinensis HOM05D000001 ORTHO05D000501 1.1e-38 164.5 119 61.3
Cpa.g.sc8.28 Carica papaya HOM05D000001 ORTHO05D000501 1.4e-38 164.1 108 65.7
Potri.014G174400 Populus trichocarpa HOM05D000001 ORTHO05D000501 1.4e-38 164.1 126 61.9
DCAR_018604 Daucus carota HOM05D002283 ORTHO05D005725 2.4e-38 163.3 123 60.2
Aa31sc147G20 Aethionema arabicum HOM05D000001 ORTHO05D000501 3.2e-38 162.9 116 62.1
CSS0002875 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D000501 4.2e-38 162.5 120 63.3
Lalb_Chr10g0100211 Lupinus albus HOM05D000001 ORTHO05D000501 4.2e-38 162.5 120 63.3
CARHR134650 Cardamine hirsuta HOM05D000001 ORTHO05D000501 7.1e-38 161.8 111 64.0
Medtr8g028080 Medicago truncatula HOM05D000001 ORTHO05D000501 7.1e-38 161.8 129 61.2
Sc17g0001470 Simmondsia chinensis HOM05D000001 ORTHO05D000501 7.1e-38 161.8 175 49.1
C04p43080 Brassica napus HOM05D000001 ORTHO05D000501 1.6e-37 160.6 113 61.1
BolC4t25887H Brassica oleracea HOM05D000001 ORTHO05D000501 1.6e-37 160.6 113 61.1
Actinidia23809 Actinidia chinensis HOM05D000001 ORTHO05D000501 2.1e-37 160.2 121 61.2
CSS0003932 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D000501 2.1e-37 160.2 125 60.8
Atru.chr6.3496 Acer truncatum HOM05D000001 ORTHO05D000501 2.7e-37 159.8 119 61.3
AT2G39780 Arabidopsis thaliana HOM05D000001 ORTHO05D000501 2.7e-37 159.8 115 60.9
arahy.Tifrunner.gnm1.ann1.6AFN3K Arachis hypogaea HOM05D000328 ORTHO05D000501 2.7e-37 159.8 112 65.2
TPR.G5088 Trifolium pratense HOM05D000001 ORTHO05D000501 4.6e-37 159.1 114 64.9
Haze_03549 Corylus avellana HOM05D000001 ORTHO05D000501 6.0e-37 158.7 132 56.8
A04p09160 Brassica napus HOM05D000001 ORTHO05D000501 7.9e-37 158.3 113 60.2
BraA04t16609Z Brassica rapa HOM05D000001 ORTHO05D000501 7.9e-37 158.3 113 60.2
Gohir.D07G201400 Gossypium hirsutum HOM05D000001 ORTHO05D000501 7.9e-37 158.3 123 58.5
PGR083G2135 Punica granatum HOM05D000001 ORTHO05D000501 7.9e-37 158.3 116 60.3
Thhalv10027545m.g Eutrema salsugineum HOM05D000001 ORTHO05D000501 1.0e-36 157.9 113 60.2
MSTRG.12737 Avicennia marina HOM05D000001 ORTHO05D000501 1.3e-36 157.5 136 55.9
Duzib133G0742 Durio zibethinus HOM05D000001 ORTHO05D000501 1.3e-36 157.5 125 56.8
Gohir.A07G195000 Gossypium hirsutum HOM05D000001 ORTHO05D000501 1.3e-36 157.5 125 56.8
Sp7g09390 Schrenkiella parvula HOM05D000001 ORTHO05D000501 1.8e-36 157.1 118 59.3
MD10G1146300 Malus domestica HOM05D000001 ORTHO05D000501 2.3e-36 156.8 118 57.6
Rhsim01G0246700 Rhododendron simsii HOM05D000001 ORTHO05D000501 2.3e-36 156.8 122 59.0
Gorai.001G226100 Gossypium raimondii HOM05D000001 ORTHO05D000501 3.0e-36 156.4 110 60.9
MD05G1152000 Malus domestica HOM05D000001 ORTHO05D000501 3.9e-36 156.0 118 57.6
Prupe.8G184700 Prunus persica HOM05D000001 ORTHO05D000501 3.9e-36 156.0 119 58.8
Lj3g0013123 Lotus japonicus HOM05D000001 ORTHO05D000501 5.1e-36 155.6 117 61.5
Peaxi162Scf01242g00036 Petunia axillaris HOM05D000001 ORTHO05D000501 5.1e-36 155.6 115 62.6
SGA_v2.0_scaffold77G25319 Striga asiatica HOM05D000001 ORTHO05D000501 5.1e-36 155.6 145 54.5
CANSAT25G0184 Cannabis sativa HOM05D000001 ORTHO05D000501 6.7e-36 155.2 117 59.0
COL.COLO4_29921 Corchorus olitorius HOM05D000001 ORTHO05D000501 6.7e-36 155.2 106 61.3
Dinv28782 Davidia involucrata HOM05D002283 ORTHO05D005725 6.7e-36 155.2 113 61.9
unitig_0.g425 Utricularia gibba HOM05D000001 ORTHO05D000501 6.7e-36 155.2 112 63.4
Duzib138G0079 Durio zibethinus HOM05D000001 ORTHO05D000501 8.7e-36 154.8 110 60.0
Nitab4.5_0014290g0010 Nicotiana tabacum HOM05D000001 ORTHO05D000501 8.7e-36 154.8 108 64.8
Solyc09g020110.3 Solanum lycopersicum HOM05D000001 ORTHO05D000501 8.7e-36 154.8 112 63.4
Sopen06g034250 Solanum pennellii HOM05D000001 ORTHO05D000501 8.7e-36 154.8 150 51.3
TWI18G1372 Tripterygium wilfordii HOM05D000001 ORTHO05D000501 8.7e-36 154.8 119 58.8
Psat4g159000 Pisum sativum HOM05D000001 ORTHO05D000501 1.1e-35 154.5 136 53.7
PGSC0003DMG400027682 Solanum tuberosum HOM05D000001 ORTHO05D000501 1.1e-35 154.5 112 63.4
Solyc06g082890.4 Solanum lycopersicum HOM05D000001 ORTHO05D000501 1.5e-35 154.1 130 55.4
Thecc.01G205800 Theobroma cacao HOM05D000001 ORTHO05D000501 1.5e-35 154.1 110 60.0
TAR362G0059 Trochodendron aralioides HOM05D000001 ORTHO05D000501 1.5e-35 154.1 121 59.5
CANSAT25G1281 Cannabis sativa HOM05D000001 ORTHO05D000501 1.9e-35 153.7 129 56.6
Ca_23574_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000501 1.9e-35 153.7 128 58.6
Ca_23583_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000501 1.9e-35 153.7 128 58.6
Manes.12G057200 Manihot esculenta HOM05D000001 ORTHO05D000501 2.5e-35 153.3 118 57.6
Ah.02g110980 Amaranthus hybridus HOM05D000001 ORTHO05D000501 3.3e-35 152.9 119 60.5
Nitab4.5_0000077g0160 Nicotiana tabacum HOM05D000001 ORTHO05D000501 3.3e-35 152.9 108 63.9
BcaNung03940 Brassica carinata HOM05D000001 ORTHO05D000501 4.3e-35 152.5 113 56.6
BcaNung03945 Brassica carinata HOM05D000001 ORTHO05D000501 4.3e-35 152.5 113 56.6
ClCG09G007980 Citrullus lanatus HOM05D000001 ORTHO05D000501 9.6e-35 151.4 122 57.4
Migut.N00684 Erythranthe guttata HOM05D000001 ORTHO05D000501 9.6e-35 151.4 121 56.2
Glyma.16G028200 Glycine max HOM05D000001 ORTHO05D000501 9.6e-35 151.4 138 54.3
SalBow2G1658 Salvia bowleyana HOM05D000001 ORTHO05D000501 9.6e-35 151.4 113 62.8
arahy.Tifrunner.gnm1.ann1.PU0L3U Arachis hypogaea HOM05D000328 ORTHO05D000191 1.3e-34 151.0 115 60.0
CsaV3_7G027100 Cucumis sativus L. HOM05D003048 ORTHO05D003418 1.3e-34 151.0 118 59.3
Glyma.07G059300 Glycine max HOM05D000001 ORTHO05D000501 1.6e-34 150.6 120 58.3
PSO017G0450 Papaver somniferum HOM05D000001 ORTHO05D000501 1.6e-34 150.6 113 58.4
PSO675G9274 Papaver somniferum HOM05D000001 ORTHO05D000501 1.6e-34 150.6 113 58.4
Dinv07638 Davidia involucrata HOM05D000001 ORTHO05D000501 4.8e-34 149.1 119 60.5
FAN15G3637 Fragaria x ananassa HOM05D000328 ORTHO05D000191 4.8e-34 149.1 126 56.3
MELO3C012716.2 Cucumis melo HOM05D000001 ORTHO05D000501 8.1e-34 148.3 112 59.8
ECA247G1044 Erigeron canadensis HOM05D000001 ORTHO05D000501 8.1e-34 148.3 95 74.7
Nitab4.5_0004982g0060 Nicotiana tabacum HOM05D000001 ORTHO05D000501 8.1e-34 148.3 109 61.5
Cc03_g12450 Coffea canephora HOM05D000001 ORTHO05D000501 1.4e-33 147.5 117 56.4
Phvul.010G110200 Phaseolus vulgaris HOM05D000001 ORTHO05D000501 1.4e-33 147.5 134 55.2
Aqoxy3G04089 Aquilegia oxysepala HOM05D000001 ORTHO05D000501 1.8e-33 147.1 114 57.0
Gohir.A11G144400 Gossypium hirsutum HOM05D000001 ORTHO05D000501 1.8e-33 147.1 112 56.2
Aqoxy3G04090 Aquilegia oxysepala HOM05D000001 ORTHO05D000501 4.0e-33 146.0 116 58.6
Eucgr.H00686 Eucalyptus grandis HOM05D000001 ORTHO05D000501 6.9e-33 145.2 119 56.3
FAN24G0970 Fragaria x ananassa HOM05D000328 ORTHO05D000191 6.9e-33 145.2 85 70.6
Gorai.007G161700 Gossypium raimondii HOM05D000001 ORTHO05D000501 6.9e-33 145.2 112 56.2
QL09p045139 Quercus lobata HOM05D000001 ORTHO05D000501 6.9e-33 145.2 128 53.1
Hund09492 Selenicereus undatus HOM05D000001 ORTHO05D000501 6.9e-33 145.2 113 59.3
VMungo0331G1324 Vigna mungo HOM05D000001 ORTHO05D000501 9.0e-33 144.8 128 54.7
Gohir.D11G150800 Gossypium hirsutum HOM05D000001 ORTHO05D000501 1.5e-32 144.1 101 60.4
CAN.G874.44 Capsicum annuum HOM05D000001 ORTHO05D000501 2.6e-32 143.3 130 55.4
CDE09G0541 Ceratophyllum demersum HOM05D000001 ORTHO05D000501 2.2e-31 140.2 110 55.5
vmacro14677 Vaccinium macrocarpon HOM05D000001 ORTHO05D000501 2.9e-31 139.8 137 50.4
Nn1g09526 Nelumbo nucifera HOM05D000001 ORTHO05D000501 1.9e-30 137.1 111 53.2
CANSAT25G2603 Cannabis sativa HOM05D000001 ORTHO05D000501 2.5e-30 136.7 93 61.3
Migut.D00765 Erythranthe guttata HOM05D000001 ORTHO05D000501 3.2e-30 136.3 121 52.1
SGA_v2.0_scaffold158G37513 Striga asiatica HOM05D000001 ORTHO05D000501 4.2e-30 136.0 116 55.2
HanXRQChr08g0231491 Helianthus annuus HOM05D000001 ORTHO05D000501 1.8e-28 130.6 110 53.6
HanXRQChr08g0231581 Helianthus annuus HOM05D000001 ORTHO05D000501 3.9e-28 129.4 117 51.3
HanXRQChr08g0231391 Helianthus annuus HOM05D000001 ORTHO05D000501 6.7e-28 128.6 117 52.1
ClCG10G009310 Citrullus lanatus HOM05D000001 ORTHO05D000501 3.7e-26 122.9 110 49.1
CsaV3_4G009480 Cucumis sativus L. HOM05D000001 ORTHO05D000501 1.2e-24 117.9 110 49.1
Sed0028152 Sechium edule HOM05D000001 ORTHO05D000501 2.6e-24 116.7 109 47.7
Os01g0897200 Oryza sativa ssp. japonica HOM05D000001 ORTHO05D000501 8.4e-23 111.7 140 40.0
HanXRQChr08g0231661 Helianthus annuus HOM05D000001 ORTHO05D000501 2.5e-22 110.2 92 53.3
ClCG10G009300 Citrullus lanatus HOM05D000001 ORTHO05D000501 5.5e-22 109.0 108 44.4
Zm00001eb144680 Zea mays HOM05D000001 ORTHO05D000501 9.3e-22 108.2 122 40.2
Lj1C106G1 Lonicera japonica HOM05D000001 ORTHO05D000501 1.2e-21 107.8 74 63.5
Carub.0004s2186 Capsella rubella HOM05D000001 ORTHO05D000501 3.5e-21 106.3 78 57.7
EL10Ac5g10576 Beta vulgaris HOM05D000001 ORTHO05D000501 6.0e-21 105.5 85 61.2
Nitab4.5_0001348g0160 Nicotiana tabacum HOM05D000001 ORTHO05D000501 1.8e-20 104.0 80 60.0
Hund02814 Selenicereus undatus HOM05D000001 ORTHO05D000501 1.8e-20 104.0 78 64.1
GSVIVG01004446001 Vitis vinifera HOM05D000001 ORTHO05D000501 3.0e-20 103.2 95 54.7
Zm00001eb144670 Zea mays HOM05D000001 ORTHO05D000501 1.1e-19 101.3 116 39.7
Os01g0897300 Oryza sativa ssp. japonica HOM05D000001 ORTHO05D000501 1.5e-19 100.9 115 41.7
Lj2C1110T5 Lonicera japonica HOM05D000001 ORTHO05D000501 3.3e-19 99.8 56 78.6
Ciclev10016242m.g Citrus clementina HOM05D000001 ORTHO05D000501 4.3e-19 99.4 90 51.1
AUR62028630 Chenopodium quinoa HOM05D000001 ORTHO05D000501 9.7e-19 98.2 85 55.3
HPP92_003442 Vanilla planifolia HOM05D000001 ORTHO05D000501 2.8e-18 96.7 125 39.2
Oeu003681.1 Olea europaea HOM05D000001 ORTHO05D000501 4.8e-18 95.9 105 50.5
AUR62008054 Chenopodium quinoa HOM05D000001 ORTHO05D000501 2.6e-16 90.1 59 64.4
Peaxi162Scf00315g00073 Petunia axillaris HOM05D000001 ORTHO05D000501 3.4e-16 89.7 54 70.4
MBI07_g34149_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000501 7.7e-16 88.6 83 45.8
Mapoly0043s0116 Marchantia polymorpha HOM05D000001 ORTHO05D000501 1.9e-14 84.0 109 34.9
MBI07_g08808_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000501 9.4e-14 81.6 94 39.4
MBI07_g34148_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000501 2.1e-13 80.5 82 42.7
ECA246G1187 Erigeron canadensis HOM05D000067 ORTHO05D000097 7.9e-13 78.6 47 74.5
ECA246G0535 Erigeron canadensis HOM05D000001 ORTHO05D004643 1.4e-12 77.8 51 70.6
Actinidia23128 Actinidia chinensis HOM05D000001 ORTHO05D000501 1.9e-06 57.4 52 51.9
ECA232G3028 Erigeron canadensis HOM05D011820 ORTHO05D004022 1.9e-06 57.4 40 62.5
ECA248G3629 Erigeron canadensis HOM05D000044 ORTHO05D000051 2.5e-06 57.0 41 70.7
ECA246G3632 Erigeron canadensis HOM05D011820 ORTHO05D188429 3.2e-06 56.6 34 67.6


User provided reference genes

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