Gene: Solyc06g082890.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc06g082890.4
- Transcript Identifier Solyc06g082890.4.1
- Gene Type Coding gene
- Location SL4.0ch06 : 46096019-46102719 : negative
Gene Family Information
- ID HOM05D000001
- #Genes/#Species 35287/100
- Phylogenetic origin
- ID ORTHO05D000501
- #Genes/#Species 845/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc06g082890.4.1
- uniprot A0A3Q7HY33
- gene_id Solyc06g082890
Descriptions
- Description Ribonuclease 2 (AHRD V3.3 *** A0A2G3CBX2_CAPCH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis | |
| GO:0090502 | IEA | GOA Database | RNA phosphodiester bond hydrolysis, endonucleolytic | |
| GO:0006401 | IBA | GOA Database | RNA catabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0033897 | IEA | GOA Database | ribonuclease T2 activity | |
| GO:0033897 | IEA | InterPro | ribonuclease T2 activity | |
| GO:0004518 | IEA | GOA Database | nuclease activity | |
| GO:0004521 | IBA | GOA Database | endoribonuclease activity | |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D000001 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005576 | IBA | GOA Database | extracellular region |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.5.11.1 | RNA processing.RNA modification.tRNA-derived fragment biogenesis.T2-type RNase (RNS) |