Gene: PGR083G2135
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR083G2135
- Transcript Identifier PGR083G2135.01
- Gene Type Coding gene
- Location NC_045133.1 : 4373682-4377593 : negative
Gene Family Information
- ID HOM05D000001
- #Genes/#Species 35287/100
- Phylogenetic origin
- ID ORTHO05D000501
- #Genes/#Species 845/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- pid XP_031405220.1
- name LOC116214087
- name XM_031549360.1
- id gene-LOC116214087
- uniprot A0A218VRK9
Descriptions
- product ribonuclease 2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007568 | ISO | PLAZA Integrative Orthology | aging | AT2G39780 |
| GO:0016075 | ISO | PLAZA Integrative Orthology | rRNA catabolic process | AT2G39780 |
| GO:0010507 | ISO | PLAZA Integrative Orthology | negative regulation of autophagy | AT2G39780 |
| GO:0090502 | IEA | GOA Database | RNA phosphodiester bond hydrolysis, endonucleolytic | |
| GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0004521 | ISO | PLAZA Integrative Orthology | endoribonuclease activity | AT2G39780 |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D000001 |
| GO:0004518 | IEA | GOA Database | nuclease activity | |
| GO:0004519 | IEA | GOA Database | endonuclease activity | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0016829 | IEA | GOA Database | lyase activity | |
| GO:0033897 | IEA | GOA Database | ribonuclease T2 activity | |
| GO:0033897 | IEA | InterPro | ribonuclease T2 activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010168 | ISO | PLAZA Integrative Orthology | ER body | AT2G39780 |
| GO:0005622 | ISO | PLAZA Integrative Orthology | intracellular anatomical structure | AT2G39780 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT2G39780 |
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT2G39780 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.5.11.1 | RNA processing.RNA modification.tRNA-derived fragment biogenesis.T2-type RNase (RNS) |